{"id":"https://openalex.org/W2807544153","doi":"https://doi.org/10.1177/1176934318775106","title":"Detecting the Population Structure and Scanning for Signatures of Selection in Horses ( Equus caballus ) From Whole-Genome Sequencing Data","display_name":"Detecting the Population Structure and Scanning for Signatures of Selection in Horses ( Equus caballus ) From Whole-Genome Sequencing Data","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2807544153","doi":"https://doi.org/10.1177/1176934318775106","mag":"2807544153","pmid":"https://pubmed.ncbi.nlm.nih.gov/29899660","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/5990873"},"language":"en","primary_location":{"id":"doi:10.1177/1176934318775106","doi":"https://doi.org/10.1177/1176934318775106","is_oa":true,"landing_page_url":"https://doi.org/10.1177/1176934318775106","pdf_url":null,"source":{"id":"https://openalex.org/S187114417","display_name":"Evolutionary Bioinformatics","issn_l":"1176-9343","issn":["1176-9343"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","jufo-1","norway-1","poland-70","russia-white-list-2"],"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Evolutionary Bioinformatics","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1177/1176934318775106","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100439683","display_name":"Cheng Zhang","orcid":"https://orcid.org/0000-0003-0607-7140","observed_orcids":["https://orcid.org/0000-0003-0607-7140"]},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Cheng Zhang","raw_affiliation_strings":["Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, China","Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101109939","display_name":"Pan Ni","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Pan Ni","raw_affiliation_strings":["Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101951344","display_name":"Hafiz Ishfaq Ahmad","orcid":"https://orcid.org/0000-0001-8437-973X","observed_orcids":["https://orcid.org/0000-0001-8437-973X"]},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hafiz Ishfaq Ahmad","raw_affiliation_strings":["Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085528127","display_name":"Gemingguli Muhatai","orcid":"https://orcid.org/0009-0000-3208-4403","observed_orcids":["https://orcid.org/0009-0000-3208-4403"]},"institutions":[{"id":"https://openalex.org/I3129293551","display_name":"Tarim University","ror":"https://ror.org/05202v862","country_code":"CN","type":"education","lineage":["https://openalex.org/I3129293551"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"M Gemingguli","raw_affiliation_strings":["College of Animal Science, Tarim University, Alar, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Animal Science, Tarim University, Alar, China","institution_ids":["https://openalex.org/I3129293551"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048042205","display_name":"A Baizilaitibei","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I3129293551","display_name":"Tarim University","ror":"https://ror.org/05202v862","country_code":"CN","type":"education","lineage":["https://openalex.org/I3129293551"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"A Baizilaitibei","raw_affiliation_strings":["College of Animal Science, Tarim University, Alar, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Animal Science, Tarim University, Alar, China","institution_ids":["https://openalex.org/I3129293551"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069797819","display_name":"D Gulibaheti","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I3129293551","display_name":"Tarim University","ror":"https://ror.org/05202v862","country_code":"CN","type":"education","lineage":["https://openalex.org/I3129293551"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"D Gulibaheti","raw_affiliation_strings":["College of Animal Science, Tarim University, Alar, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Animal Science, Tarim University, Alar, China","institution_ids":["https://openalex.org/I3129293551"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008133107","display_name":"Yaping Fang","orcid":"https://orcid.org/0000-0001-6075-0768","observed_orcids":["https://orcid.org/0000-0001-6075-0768"]},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yaping Fang","raw_affiliation_strings":["Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100438279","display_name":"Haiyang Wang","orcid":"https://orcid.org/0000-0002-1302-5747","observed_orcids":["https://orcid.org/0000-0002-1302-5747","https://orcid.org/0009-0001-4605-4587","https://orcid.org/0009-0004-1351-1683","https://orcid.org/0009-0009-3262-5906"]},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haiyang Wang","raw_affiliation_strings":["Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, China","Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Akhtar Rasool Asif","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Akhtar Rasool Asif","raw_affiliation_strings":["Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056440160","display_name":"Changyi Xiao","orcid":"https://orcid.org/0000-0001-9602-6093","observed_orcids":["https://orcid.org/0000-0001-9602-6093"]},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Changyi Xiao","raw_affiliation_strings":["Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015845819","display_name":"Jianhai Chen","orcid":"https://orcid.org/0000-0003-0093-2003","observed_orcids":["https://orcid.org/0000-0003-0093-2003"]},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianhai Chen","raw_affiliation_strings":["Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073915503","display_name":"Yunlong Ma","orcid":"https://orcid.org/0000-0002-9892-3887","observed_orcids":["https://orcid.org/0000-0002-9892-3887"]},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yunlong Ma","raw_affiliation_strings":["Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100776474","display_name":"Xiangdong Liu","orcid":"https://orcid.org/0000-0002-9816-688X","observed_orcids":["https://orcid.org/0000-0002-9816-688X","https://orcid.org/0000-0003-1761-7245"]},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiangdong Liu","raw_affiliation_strings":["Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042719299","display_name":"Xiaoyong Du","orcid":"https://orcid.org/0000-0002-0892-1993","observed_orcids":["https://orcid.org/0000-0002-0892-1993"]},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiaoyong Du","raw_affiliation_strings":["Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, China","Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065223172","display_name":"Shuhong Zhao","orcid":"https://orcid.org/0000-0002-3997-2320","observed_orcids":["https://orcid.org/0000-0002-3997-2320"]},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuhong Zhao","raw_affiliation_strings":["Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Sciences & Technology, Huazhong Agricultural University, Wuhan, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204823248"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5042719299"],"corresponding_institution_ids":["https://openalex.org/I204823248"],"apc_list":{"value":2650,"currency":"USD","value_usd":2650},"apc_paid":{"value":2650,"currency":"USD","value_usd":2650},"fwci":1.8312,"has_fulltext":true,"cited_by_count":25,"citation_normalized_percentile":{"value":0.84913518,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":87,"max":99},"biblio":{"volume":"14","issue":null,"first_page":"1176934318775106","last_page":"1176934318775106"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.9800000190734863,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.9800000190734863,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10872","display_name":"Veterinary Equine Medical Research","score":0.00860000029206276,"subfield":{"id":"https://openalex.org/subfields/3402","display_name":"Equine"},"field":{"id":"https://openalex.org/fields/34","display_name":"Veterinary"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.003800000064074993,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/horse-domestication","display_name":"horse domestication","score":0.7850000262260437},{"id":"https://openalex.org/keywords/horses","display_name":"horses","score":0.9150000214576721},{"id":"https://openalex.org/keywords/population-structure","display_name":"population structure","score":0.7900000214576721},{"id":"https://openalex.org/keywords/signatures-of-selection","display_name":"selection signatures","score":0.9089999794960022},{"id":"https://openalex.org/keywords/selective-sweeps","display_name":"selective sweeps","score":0.9539999961853027},{"id":"https://openalex.org/keywords/kazakh-horse","display_name":"Kazakh horse","score":0.9580000042915344},{"id":"https://openalex.org/keywords/loss-of-function-variants","display_name":"loss-of-function mutations","score":0.9010000228881836},{"id":"https://openalex.org/keywords/immune-response-genes","display_name":"immune response genes","score":0.7599999904632568},{"id":"https://openalex.org/keywords/wnt-signaling","display_name":"Wnt signaling","score":0.8529999852180481},{"id":"https://openalex.org/keywords/exercise-training","display_name":"exercise training","score":0.5659999847412109},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphisms","display_name":"single nucleotide polymorphisms","score":0.8050000071525574}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6763589978218079},{"id":"https://openalex.org/C134387633","wikidata":"https://www.wikidata.org/wiki/Q11395","display_name":"Domestication","level":2,"score":0.663007378578186},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6419400572776794},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5537013411521912},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.5268805623054504},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5000746250152588},{"id":"https://openalex.org/C2781297163","wikidata":"https://www.wikidata.org/wiki/Q9252","display_name":"Kazakh","level":2,"score":0.4578624367713928},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3563978672027588},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1177/1176934318775106","doi":"https://doi.org/10.1177/1176934318775106","is_oa":true,"landing_page_url":"https://doi.org/10.1177/1176934318775106","pdf_url":null,"source":{"id":"https://openalex.org/S187114417","display_name":"Evolutionary Bioinformatics","issn_l":"1176-9343","issn":["1176-9343"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","jufo-1","norway-1","poland-70","russia-white-list-2"],"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Evolutionary Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5990873","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC5990873/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC5990873/pdf/","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Evol Bioinform Online","raw_type":"Text"},{"id":"pmh:oai:europepmc.org:4950879","doi":null,"is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC5990873","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"Text"},{"id":"pmid:29899660","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29899660","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Evolutionary bioinformatics online","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1177/1176934318775106","doi":"https://doi.org/10.1177/1176934318775106","is_oa":true,"landing_page_url":"https://doi.org/10.1177/1176934318775106","pdf_url":null,"source":{"id":"https://openalex.org/S187114417","display_name":"Evolutionary Bioinformatics","issn_l":"1176-9343","issn":["1176-9343"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","jufo-1","norway-1","poland-70","russia-white-list-2"],"host_organization":"https://openalex.org/P4310320017","host_organization_name":"SAGE Publishing","host_organization_lineage":["https://openalex.org/P4310320017"],"host_organization_lineage_names":["SAGE Publishing"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Evolutionary Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.4359000027179718,"id":"https://metadata.un.org/sdg/2"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2807544153.pdf","grobid_xml":"https://content.openalex.org/works/W2807544153.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W652341042","https://openalex.org/W1550457618","https://openalex.org/W1821976079","https://openalex.org/W1977651955","https://openalex.org/W1980366284","https://openalex.org/W2000728634","https://openalex.org/W2020383453","https://openalex.org/W2023807226","https://openalex.org/W2032367243","https://openalex.org/W2033123297","https://openalex.org/W2075374561","https://openalex.org/W2077663320","https://openalex.org/W2083200540","https://openalex.org/W2087854951","https://openalex.org/W2092397236","https://openalex.org/W2098705911","https://openalex.org/W2102951980","https://openalex.org/W2103441770","https://openalex.org/W2106578986","https://openalex.org/W2109389832","https://openalex.org/W2116226961","https://openalex.org/W2119180969","https://openalex.org/W2119444539","https://openalex.org/W2122683221","https://openalex.org/W2129034036","https://openalex.org/W2131271579","https://openalex.org/W2131732030","https://openalex.org/W2132117565","https://openalex.org/W2134599124","https://openalex.org/W2141320376","https://openalex.org/W2142138981","https://openalex.org/W2143602768","https://openalex.org/W2149725438","https://openalex.org/W2160844537","https://openalex.org/W2161507378","https://openalex.org/W2164012319","https://openalex.org/W2189259488","https://openalex.org/W2190582005","https://openalex.org/W2337823923","https://openalex.org/W2528792003","https://openalex.org/W2783422106"],"related_works":["https://openalex.org/W4317436365","https://openalex.org/W2801527687","https://openalex.org/W6926321440","https://openalex.org/W7047459212","https://openalex.org/W2062129678","https://openalex.org/W6921618806","https://openalex.org/W2912724395","https://openalex.org/W7169713138","https://openalex.org/W7125012420","https://openalex.org/W3024662562"],"abstract_inverted_index":{"Animal":[0],"domestication":[1],"gives":[2],"rise":[3],"to":[4,155,186,215,239,294],"gradual":[5],"changes":[6,287],"at":[7],"the":[8,21,56,63,156,169,187,201,210,226,254,289,299],"genomic":[9,41,218,233],"level":[10],"through":[11],"selection":[12,47,224],"in":[13,20,48,120,135,151,195,225,280,286,288],"populations.":[14],"Selective":[15],"sweeps":[16,258],"have":[17,284],"been":[18],"traced":[19],"genomes":[22],"of":[23,46,55,65,172,204,222,231,235,267,291],"many":[24],"animal":[25],"species,":[26],"including":[27,264],"humans,":[28],"cattle,":[29],"and":[30,40,85,108,125,138,163,181,274,298],"dogs.":[31],"However,":[32],"little":[33],"is":[34,69],"known":[35],"regarding":[36],"positional":[37],"candidate":[38],"genes":[39,148,255,292],"regions":[42,219],"that":[43,117,145,168,253],"exhibit":[44],"signatures":[45],"domestic":[49,206,281],"horses.":[50,207],"In":[51,72],"addition,":[52],"an":[53],"understanding":[54],"genetic":[57,202],"processes":[58],"underlying":[59],"horse":[60,227],"domestication,":[61],"especially":[62],"origin":[64,203],"Chinese":[66,82,205],"native":[67,83,115,193],"populations,":[68],"still":[70],"lacking.":[71],"our":[73],"study,":[74],"we":[75],"generated":[76],"whole":[77],"genome":[78,93],"sequences":[79],"from":[80,95],"4":[81],"horses":[84,110,183,282],"combined":[86],"them":[87],"with":[88,190,197,261],"48":[89],"publicly":[90],"available":[91],"full":[92],"sequences,":[94],"which":[96],"15":[97],"341":[98],"213":[99],"high-quality":[100],"unique":[101],"single-nucleotide":[102],"polymorphism":[103],"variants":[104,134],"were":[105,118,149,184,259],"identified.":[106],"Kazakh":[107,121,180],"Lichuan":[109,182],"are":[111],"2":[112],"typical":[113],"Asian":[114,192],"breeds":[116,174],"formed":[119],"or":[122],"Northwest":[123],"China":[124],"South":[126],"China,":[127],"respectively.":[128],"We":[129,208],"detected":[130],"1390":[131],"loss-of-function":[132],"(LoF)":[133],"protein-coding":[136],"genes,":[137],"gene":[139],"ontology":[140],"(GO)":[141],"enrichment":[142,250],"analysis":[143,166,251],"revealed":[144,252],"some":[146],"LoF-affected":[147],"overrepresented":[150,260],"GO":[152,249,262],"terms":[153],"related":[154,293],"immune":[157],"response.":[158],"Bayesian":[159],"clustering,":[160],"distance":[161],"analysis,":[162],"principal":[164],"component":[165],"demonstrated":[167],"population":[170],"structure":[171],"these":[173],"largely":[175],"reflected":[176],"weak":[177],"geographic":[178],"patterns.":[179],"assigned":[185],"same":[188],"lineage":[189],"other":[191],"breeds,":[194],"agreement":[196],"previous":[198],"studies":[199],"on":[200],"applied":[209],"composite":[211],"likelihood":[212],"ratio":[213],"method":[214],"scan":[216],"for":[217],"showing":[220],"signals":[221],"recent":[223],"genome.":[228],"A":[229],"total":[230],"1052":[232],"windows":[234],"10":[236],"kB,":[237],"corresponding":[238],"933":[240],"distinct":[241],"core":[242],"regions,":[243],"significantly":[244],"exceeded":[245],"neutral":[246],"simulations.":[247],"The":[248],"under":[256],"selective":[257],"terms,":[263],"\"negative":[265],"regulation":[266],"canonical":[268],"Wnt":[269],"signaling":[270],"pathway,\"":[271],"\"muscle":[272],"contraction,\"":[273],"\"axon":[275],"guidance.\"":[276],"Frequent":[277],"exercise":[278],"training":[279],"may":[283],"resulted":[285],"expression":[290],"metabolism,":[295],"muscle":[296],"structure,":[297],"nervous":[300],"system.":[301]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":8}],"updated_date":"2026-11-13T13:42:25.865203","created_date":"2018-06-13T00:00:00"}
