{"id":"https://openalex.org/W2807484131","doi":"https://doi.org/10.1111/1755-0998.12910","title":"A bioinformatic pipeline for identifying informative SNP panels for parentage assignment from RAD seq data","display_name":"A bioinformatic pipeline for identifying informative SNP panels for parentage assignment from RAD seq data","publication_year":2018,"publication_date":"2018-06-05","ids":{"openalex":"https://openalex.org/W2807484131","doi":"https://doi.org/10.1111/1755-0998.12910","mag":"2807484131","pmid":"https://pubmed.ncbi.nlm.nih.gov/29870119","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/6207459"},"language":"en","primary_location":{"id":"doi:10.1111/1755-0998.12910","doi":"https://doi.org/10.1111/1755-0998.12910","is_oa":true,"landing_page_url":"https://doi.org/10.1111/1755-0998.12910","pdf_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/1755-0998.12910","source":{"id":"https://openalex.org/S64961995","display_name":"Molecular Ecology Resources","issn_l":"1755-098X","issn":["1755-098X","1755-0998"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","jufo-2","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Ecology Resources","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/1755-0998.12910","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062440774","display_name":"Kimberly R. Andrews","orcid":"https://orcid.org/0000-0003-4721-1924","observed_orcids":["https://orcid.org/0000-0003-4721-1924"]},"institutions":[{"id":"https://openalex.org/I155093810","display_name":"University of Idaho","ror":"https://ror.org/03hbp5t65","country_code":"US","type":"education","lineage":["https://openalex.org/I155093810"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kimberly R. Andrews","raw_affiliation_strings":["Department of Fish and Wildlife Sciences, University of Idaho, Moscow, Idaho"],"raw_orcid":"https://orcid.org/0000-0003-4721-1924","affiliations":[{"raw_affiliation_string":"Department of Fish and Wildlife Sciences, University of Idaho, Moscow, Idaho","institution_ids":["https://openalex.org/I155093810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019902701","display_name":"Jennifer R. Adams","orcid":"https://orcid.org/0000-0002-2729-0250","observed_orcids":["https://orcid.org/0000-0002-2729-0250"]},"institutions":[{"id":"https://openalex.org/I155093810","display_name":"University of Idaho","ror":"https://ror.org/03hbp5t65","country_code":"US","type":"education","lineage":["https://openalex.org/I155093810"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jennifer R. Adams","raw_affiliation_strings":["Department of Fish and Wildlife Sciences, University of Idaho, Moscow, Idaho"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Fish and Wildlife Sciences, University of Idaho, Moscow, Idaho","institution_ids":["https://openalex.org/I155093810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5133922786","display_name":"E. Frances Cassirer","orcid":"https://orcid.org/0009-0003-9215-054X","observed_orcids":["https://orcid.org/0009-0003-9215-054X"]},"institutions":[{"id":"https://openalex.org/I1317689889","display_name":"Idaho Department of Fish and Game","ror":"https://ror.org/03fcx9267","country_code":"US","type":"government","lineage":["https://openalex.org/I1317689889"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"E. Frances Cassirer","raw_affiliation_strings":["Idaho Department of Fish and Game, Lewiston, Idaho"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Idaho Department of Fish and Game, Lewiston, Idaho","institution_ids":["https://openalex.org/I1317689889"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001484169","display_name":"Raina K. Plowright","orcid":"https://orcid.org/0000-0002-3338-6590","observed_orcids":["https://orcid.org/0000-0002-3338-6590"]},"institutions":[{"id":"https://openalex.org/I23732399","display_name":"Montana State University","ror":"https://ror.org/02w0trx84","country_code":"US","type":"education","lineage":["https://openalex.org/I23732399","https://openalex.org/I4210126032"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Raina K. Plowright","raw_affiliation_strings":["Department of Microbiology and Immunology, Montana State University, Bozeman, Montana"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Immunology, Montana State University, Bozeman, Montana","institution_ids":["https://openalex.org/I23732399"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027012026","display_name":"Colby Gardner","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1343028186","display_name":"United States Fish and Wildlife Service","ror":"https://ror.org/04k7dar27","country_code":"US","type":"government","lineage":["https://openalex.org/I1335927249","https://openalex.org/I1343028186"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Colby Gardner","raw_affiliation_strings":["U.S. Fish and Wildlife Service, Albuquerque, New Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"U.S. Fish and Wildlife Service, Albuquerque, New Mexico","institution_ids":["https://openalex.org/I1343028186"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052699064","display_name":"Maggie Dwire","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1343028186","display_name":"United States Fish and Wildlife Service","ror":"https://ror.org/04k7dar27","country_code":"US","type":"government","lineage":["https://openalex.org/I1335927249","https://openalex.org/I1343028186"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Maggie Dwire","raw_affiliation_strings":["U.S. Fish and Wildlife Service, Albuquerque, New Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"U.S. Fish and Wildlife Service, Albuquerque, New Mexico","institution_ids":["https://openalex.org/I1343028186"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079923400","display_name":"Paul A. Hohenlohe","orcid":"https://orcid.org/0000-0002-7616-0161","observed_orcids":["https://orcid.org/0000-0002-7616-0161"]},"institutions":[{"id":"https://openalex.org/I155093810","display_name":"University of Idaho","ror":"https://ror.org/03hbp5t65","country_code":"US","type":"education","lineage":["https://openalex.org/I155093810"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Paul A. Hohenlohe","raw_affiliation_strings":["Department of Biological Sciences, Institute for Bioinformatics and Evolutionary Studies, University of Idaho, Moscow, Idaho"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Institute for Bioinformatics and Evolutionary Studies, University of Idaho, Moscow, Idaho","institution_ids":["https://openalex.org/I155093810"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088080829","display_name":"Lisette P. Waits","orcid":"https://orcid.org/0000-0002-1323-0812","observed_orcids":["https://orcid.org/0000-0002-1323-0812"]},"institutions":[{"id":"https://openalex.org/I155093810","display_name":"University of Idaho","ror":"https://ror.org/03hbp5t65","country_code":"US","type":"education","lineage":["https://openalex.org/I155093810"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lisette P. Waits","raw_affiliation_strings":["Department of Fish and Wildlife Sciences, University of Idaho, Moscow, Idaho"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Fish and Wildlife Sciences, University of Idaho, Moscow, Idaho","institution_ids":["https://openalex.org/I155093810"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5062440774"],"corresponding_institution_ids":["https://openalex.org/I155093810"],"apc_list":{"value":5250,"currency":"USD","value_usd":5250},"apc_paid":null,"fwci":4.3242,"has_fulltext":true,"cited_by_count":56,"citation_normalized_percentile":{"value":0.95528095,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"18","issue":"6","first_page":"1263","last_page":"1281"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.00430000014603138,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.0031999999191612005,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/parentage-assignment","display_name":"parentage assignment","score":0.8669999837875366},{"id":"https://openalex.org/keywords/radseq","display_name":"RADseq","score":0.6299999952316284},{"id":"https://openalex.org/keywords/bioinformatics-pipeline","display_name":"bioinformatics pipeline","score":0.7409999966621399},{"id":"https://openalex.org/keywords/mexican-gray-wolf","display_name":"Mexican gray wolf","score":0.7139999866485596},{"id":"https://openalex.org/keywords/bighorn-sheep","display_name":"bighorn sheep","score":0.9950000047683716},{"id":"https://openalex.org/keywords/microsatellite-markers","display_name":"microsatellite markers","score":0.7419999837875366},{"id":"https://openalex.org/keywords/reference-genome","display_name":"reference genome","score":0.8339999914169312},{"id":"https://openalex.org/keywords/genotyping-accuracy","display_name":"genotyping accuracy","score":0.7730000019073486},{"id":"https://openalex.org/keywords/unlinked-loci","display_name":"unlinked loci","score":0.7789999842643738},{"id":"https://openalex.org/keywords/wild-populations","display_name":"natural populations","score":0.527999997138977},{"id":"https://openalex.org/keywords/low-genetic-diversity","display_name":"low genetic diversity","score":0.6380000114440918}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9082554578781128},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.7467223405838013},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5732935070991516},{"id":"https://openalex.org/C139275648","wikidata":"https://www.wikidata.org/wiki/Q17134011","display_name":"SNP","level":5,"score":0.4971604645252228},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.41638314723968506},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.15425196290016174},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15157738327980042},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.1321374475955963},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.07498130202293396},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010375","descriptor_name":"Pedigree","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D018895","descriptor_name":"Microsatellite Repeats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019596","descriptor_name":"Wolves","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D019596","descriptor_name":"Wolves","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D034581","descriptor_name":"Sheep, Bighorn","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D034581","descriptor_name":"Sheep, Bighorn","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D060005","descriptor_name":"Genotyping Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1111/1755-0998.12910","doi":"https://doi.org/10.1111/1755-0998.12910","is_oa":true,"landing_page_url":"https://doi.org/10.1111/1755-0998.12910","pdf_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/1755-0998.12910","source":{"id":"https://openalex.org/S64961995","display_name":"Molecular Ecology Resources","issn_l":"1755-098X","issn":["1755-098X","1755-0998"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","jufo-2","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Ecology Resources","raw_type":"journal-article"},{"id":"pmid:29870119","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29870119","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular ecology resources","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:5785301","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6207459","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6207459","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC6207459/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Mol Ecol Resour","raw_type":"Text"},{"id":"pmh:oai:scholarworks.montana.edu:1/15269","doi":null,"is_oa":false,"landing_page_url":"https://scholarworks.montana.edu/xmlui/handle/1/15269","pdf_url":null,"source":{"id":"https://openalex.org/S4306402563","display_name":"Montana State University ScholarWorks (Montana State University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I23732399","host_organization_name":"Montana State University","host_organization_lineage":["https://openalex.org/I23732399"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:noaa.stacks:noaa:28625","doi":null,"is_oa":false,"landing_page_url":"https://doi.org/10.1111/1755-0998.12910","pdf_url":null,"source":{"id":"https://openalex.org/S4377196172","display_name":"NOAA Institutional Repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Molecular Ecology Resources 18(6): 1263-1281, 2018","raw_type":null}],"best_oa_location":{"id":"doi:10.1111/1755-0998.12910","doi":"https://doi.org/10.1111/1755-0998.12910","is_oa":true,"landing_page_url":"https://doi.org/10.1111/1755-0998.12910","pdf_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/1755-0998.12910","source":{"id":"https://openalex.org/S64961995","display_name":"Molecular Ecology Resources","issn_l":"1755-098X","issn":["1755-098X","1755-0998"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","jufo-2","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Ecology Resources","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1781572871","display_name":"COBRE Phase III: Transitional Center for Research on Processes in Evolution","funder_award_id":"P30GM103324","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G2826375144","display_name":null,"funder_award_id":"51040-MUSRI2015-03","funder_id":"https://openalex.org/F4320315551","funder_display_name":"Montana University System"},{"id":"https://openalex.org/G3434531728","display_name":null,"funder_award_id":"P20GM103474","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G450852192","display_name":null,"funder_award_id":"NA15OAR4320063","funder_id":"https://openalex.org/F4320332181","funder_display_name":"National Oceanic and Atmospheric Administration"},{"id":"https://openalex.org/G6015764604","display_name":null,"funder_award_id":"D13ZO\u2010081","funder_id":"https://openalex.org/F4320306437","funder_display_name":"Morris Animal Foundation"},{"id":"https://openalex.org/G6367438762","display_name":null,"funder_award_id":"NA15OAR4320063","funder_id":"https://openalex.org/F4320311342","funder_display_name":"Joint Institute for the Study of the Atmosphere and Ocean"},{"id":"https://openalex.org/G6413284489","display_name":"Emergence, transmission and evolution of Tasmanian devil facial tumor disease","funder_award_id":"1316549","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6843095815","display_name":null,"funder_award_id":"NA15OAR4320063","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7409859820","display_name":null,"funder_award_id":"51040-MUSRI2015-03","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7838063001","display_name":"Center for Zoonotic and Emerging Infectious Diseases","funder_award_id":"P30GM110732","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G9000867577","display_name":"MT INBRE: A Multidisciplinary Research Network","funder_award_id":"P20GM103474","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306437","display_name":"Morris Animal Foundation","ror":"https://ror.org/05pg13f04"},{"id":"https://openalex.org/F4320311342","display_name":"Joint Institute for the Study of the Atmosphere and Ocean","ror":"https://ror.org/00cvxb145"},{"id":"https://openalex.org/F4320315551","display_name":"Montana University System","ror":"https://ror.org/052msxy68"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332181","display_name":"National Oceanic and Atmospheric Administration","ror":"https://ror.org/02z5nhe81"},{"id":"https://openalex.org/F4320332182","display_name":"U.S. Fish and Wildlife Service","ror":"https://ror.org/04k7dar27"},{"id":"https://openalex.org/F4320332383","display_name":"California Department of Fish and Wildlife","ror":"https://ror.org/02v6w2r95"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F7246784626","display_name":"Oregon Department of Fish and Wildlife","ror":"https://ror.org/00w64gh11"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2807484131.pdf","grobid_xml":"https://content.openalex.org/works/W2807484131.grobid-xml"},"referenced_works_count":67,"referenced_works":["https://openalex.org/W1544161192","https://openalex.org/W1557009574","https://openalex.org/W1576934797","https://openalex.org/W1902647886","https://openalex.org/W1964598131","https://openalex.org/W1978732934","https://openalex.org/W1978746776","https://openalex.org/W1979390471","https://openalex.org/W1980416000","https://openalex.org/W1981981738","https://openalex.org/W1989825694","https://openalex.org/W2005935256","https://openalex.org/W2019391367","https://openalex.org/W2027828573","https://openalex.org/W2034134936","https://openalex.org/W2040772662","https://openalex.org/W2047523135","https://openalex.org/W2049677620","https://openalex.org/W2055987794","https://openalex.org/W2065363036","https://openalex.org/W2070049784","https://openalex.org/W2075700203","https://openalex.org/W2087260514","https://openalex.org/W2091450548","https://openalex.org/W2092673641","https://openalex.org/W2096917893","https://openalex.org/W2107473082","https://openalex.org/W2108234281","https://openalex.org/W2108524369","https://openalex.org/W2108893138","https://openalex.org/W2110193359","https://openalex.org/W2115025364","https://openalex.org/W2118422005","https://openalex.org/W2122126732","https://openalex.org/W2124300302","https://openalex.org/W2126121566","https://openalex.org/W2127477247","https://openalex.org/W2130562173","https://openalex.org/W2135393303","https://openalex.org/W2139440257","https://openalex.org/W2147105908","https://openalex.org/W2148694018","https://openalex.org/W2150374976","https://openalex.org/W2151993560","https://openalex.org/W2152778230","https://openalex.org/W2156547590","https://openalex.org/W2159277368","https://openalex.org/W2159474015","https://openalex.org/W2161184021","https://openalex.org/W2161633633","https://openalex.org/W2163023674","https://openalex.org/W2169773990","https://openalex.org/W2170551349","https://openalex.org/W2170620293","https://openalex.org/W2176235393","https://openalex.org/W2263977295","https://openalex.org/W2405421757","https://openalex.org/W2461189525","https://openalex.org/W2488354499","https://openalex.org/W2515703613","https://openalex.org/W2572530060","https://openalex.org/W2596519249","https://openalex.org/W2600760682","https://openalex.org/W2604924104","https://openalex.org/W2752913430","https://openalex.org/W2951571068","https://openalex.org/W2952033584"],"related_works":["https://openalex.org/W3048390515","https://openalex.org/W1003757667","https://openalex.org/W2929650387","https://openalex.org/W2473587266","https://openalex.org/W4252953146","https://openalex.org/W2271836949","https://openalex.org/W2595290579","https://openalex.org/W7008891887","https://openalex.org/W2954459962","https://openalex.org/W869325510"],"abstract_inverted_index":{"The":[0],"development":[1],"of":[2,11,19,25,76,91,115,124,136,166,171,177,186,211,219,271,312],"high-throughput":[3],"sequencing":[4,51],"technologies":[5],"is":[6],"dramatically":[7],"increasing":[8],"the":[9,17,113,122,134,175,257],"use":[10,135],"single":[12,158],"nucleotide":[13],"polymorphisms":[14],"(SNPs)":[15],"across":[16,127,252],"field":[18,194],"genetics,":[20],"but":[21,216],"most":[22],"parentage":[23,45,100,125,151,178,235,272,306],"studies":[24],"wild":[26],"populations":[27,90],"still":[28],"rely":[29],"on":[30,88,193],"microsatellites.":[31,144,267],"We":[32,84,120],"developed":[33],"a":[34,63,137,157,190,227],"bioinformatic":[35],"pipeline":[36,55,87,296],"for":[37,44,58,98,153,203,238,256,284,291,305],"identifying":[38],"SNP":[39,128,231,254,302],"panels":[40,129,232,255],"that":[41,79],"are":[42,102],"informative":[43],"analysis":[46,59,126,273,307],"from":[47,156,164,206,266],"restriction":[48],"site-associated":[49],"DNA":[50],"(RADseq)":[52],"data.":[53,195],"This":[54],"includes":[56],"options":[57],"with":[60,131,224,233,264,308],"or":[61,132],"without":[62,133,226],"reference":[64,138,228],"genome,":[65,139],"and":[66,73,95,112,140,143,169,174,225,260,269,288],"provides":[67],"methods":[68],"to":[69,104,108,300],"maximize":[70],"genotyping":[71,303],"accuracy":[72,176,237],"select":[74],"sets":[75],"unlinked":[77],"loci":[78],"have":[80],"high":[81],"statistical":[82],"power.":[83],"test":[85],"this":[86],"small":[89,310],"Mexican":[92,146,239,285],"gray":[93,147,240,286],"wolf":[94,287],"bighorn":[96,197,258,292],"sheep,":[97,198,259,293],"which":[99],"analyses":[101,152,202],"expected":[103],"be":[105,181,298],"challenging":[106],"due":[107],"low":[109],"genetic":[110],"diversity":[111],"presence":[114],"many":[116],"closely":[117],"related":[118],"individuals.":[119],"compare":[121],"results":[123],"generated":[130],"between":[141],"SNPs":[142,283,290],"For":[145,196],"wolf,":[148,241],"we":[149,199],"conducted":[150,200],"30":[154],"pups":[155],"cohort":[159],"where":[160,209],"samples":[161],"were":[162,188,214,221,249,261,274],"available":[163],"64%":[165],"possible":[167,172,212],"mothers":[168,213],"53%":[170],"fathers,":[173],"assignments":[179,248,265],"could":[180],"estimated":[182],"because":[183],"true":[184,217],"identities":[185,218],"parents":[187,220],"known":[189],"priori":[191],"based":[192],"maternity":[201],"39":[204],"lambs":[205],"five":[207],"cohorts":[208],"77%":[210],"sampled,":[215],"unknown.":[222],"Analyses":[223],"genome":[229],"produced":[230],"\u226595%":[234],"assignment":[236],"outperforming":[242],"microsatellites":[243],"at":[244],"78%":[245],"accuracy.":[246],"Maternity":[247],"completely":[250],"consistent":[251,263],"all":[253],"74.4%":[262],"Accuracy":[268],"consistency":[270],"not":[275],"reduced":[276],"when":[277],"using":[278],"as":[279,281],"few":[280],"284":[282],"142":[289],"indicating":[294],"our":[295],"can":[297],"used":[299],"develop":[301],"assays":[304],"relatively":[309],"numbers":[311],"loci.":[313]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":14},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":2}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2018-06-13T00:00:00"}