{"id":"https://openalex.org/W2806177680","doi":"https://doi.org/10.1038/s41598-018-23558-1","title":"Transcriptome-wide identification and screening of WRKY factors involved in the regulation of taxol biosynthesis in Taxus chinensis","display_name":"Transcriptome-wide identification and screening of WRKY factors involved in the regulation of taxol biosynthesis in Taxus chinensis","publication_year":2018,"publication_date":"2018-03-26","ids":{"openalex":"https://openalex.org/W2806177680","doi":"https://doi.org/10.1038/s41598-018-23558-1","mag":"2806177680","pmid":"https://pubmed.ncbi.nlm.nih.gov/29581461","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/5980082"},"language":"en","primary_location":{"id":"doi:10.1038/s41598-018-23558-1","doi":"https://doi.org/10.1038/s41598-018-23558-1","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41598-018-23558-1","pdf_url":"https://www.nature.com/articles/s41598-018-23558-1.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.nature.com/articles/s41598-018-23558-1.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Meng Zhang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Meng Zhang","raw_affiliation_strings":["Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100383116","display_name":"Ying Chen","orcid":"https://orcid.org/0000-0003-2001-5413","observed_orcids":["https://orcid.org/0000-0003-2001-5413"]},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ying Chen","raw_affiliation_strings":["Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100533073","display_name":"Lin Nie","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lin Nie","raw_affiliation_strings":["Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101298162","display_name":"Xiaofei Jin","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaofei Jin","raw_affiliation_strings":["Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078491493","display_name":"Weifang Liao","orcid":"https://orcid.org/0000-0002-2239-566X","observed_orcids":["https://orcid.org/0000-0002-2239-566X"]},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weifang Liao","raw_affiliation_strings":["Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058108653","display_name":"Shengying Zhao","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shengying Zhao","raw_affiliation_strings":["Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037777759","display_name":"Chunhua Fu","orcid":"https://orcid.org/0000-0002-4533-0578","observed_orcids":["https://orcid.org/0000-0002-4533-0578"]},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Chunhua Fu","raw_affiliation_strings":["Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China. fuch2003@126.com","Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China. fuch2003@126.com","Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China. fuch2003@126.com","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China. fuch2003@126.com","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5109304101","display_name":"Longjiang Yu","orcid":"https://orcid.org/0000-0003-2517-2266","observed_orcids":["https://orcid.org/0000-0003-2517-2266"]},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Longjiang Yu","raw_affiliation_strings":["Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Resource Biology and Biotechnology, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, Hubei, P. R. China","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Key Laboratory of Molecular Biophysics Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, No.1037 Luoyu Road, Wuhan, 430074, P. R. China","institution_ids":["https://openalex.org/I47720641"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5037777759"],"corresponding_institution_ids":["https://openalex.org/I47720641"],"apc_list":{"value":2690,"currency":"USD","value_usd":2690},"apc_paid":{"value":2690,"currency":"USD","value_usd":2690},"fwci":1.8731,"has_fulltext":true,"cited_by_count":79,"citation_normalized_percentile":{"value":0.86604807,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":100},"biblio":{"volume":"8","issue":"1","first_page":"5197","last_page":"5197"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11882","display_name":"Plant biochemistry and biosynthesis","score":0.6523000001907349,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11882","display_name":"Plant biochemistry and biosynthesis","score":0.6523000001907349,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11237","display_name":"Plant Gene Expression Analysis","score":0.32100000977516174,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.017000000923871994,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/wrky-transcription-factors","display_name":"WRKY transcription factors","score":0.9919999837875366},{"id":"https://openalex.org/keywords/taxol-biosynthesis","display_name":"taxol biosynthesis","score":0.8980000019073486},{"id":"https://openalex.org/keywords/taxus-chinensis","display_name":"Taxus chinensis","score":0.9950000047683716},{"id":"https://openalex.org/keywords/methyl-jasmonate","display_name":"methyl jasmonate","score":0.8169999718666077},{"id":"https://openalex.org/keywords/salicylic-acid","display_name":"salicylic acid","score":0.9980000257492065},{"id":"https://openalex.org/keywords/overexpression","display_name":"overexpression","score":0.460999995470047},{"id":"https://openalex.org/keywords/plant-secondary-metabolism","display_name":"plant secondary metabolism","score":0.8489999771118164}],"concepts":[{"id":"https://openalex.org/C79877727","wikidata":"https://www.wikidata.org/wiki/Q24786020","display_name":"WRKY protein domain","level":5,"score":0.9896982908248901},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.8644183874130249},{"id":"https://openalex.org/C2778894183","wikidata":"https://www.wikidata.org/wiki/Q27355","display_name":"Taxus","level":2,"score":0.7362319231033325},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6836234927177429},{"id":"https://openalex.org/C2777942875","wikidata":"https://www.wikidata.org/wiki/Q26840883","display_name":"Methyl jasmonate","level":3,"score":0.609433114528656},{"id":"https://openalex.org/C553450214","wikidata":"https://www.wikidata.org/wiki/Q851162","display_name":"Biosynthesis","level":3,"score":0.518675684928894},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4583846926689148},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.30546683073043823},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.29303985834121704},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.22363823652267456}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010937","descriptor_name":"Plant Growth Regulators","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D015533","descriptor_name":"Transcriptional Activation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017239","descriptor_name":"Paclitaxel","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D017239","descriptor_name":"Paclitaxel","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020946","descriptor_name":"Taxus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D020946","descriptor_name":"Taxus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1038/s41598-018-23558-1","doi":"https://doi.org/10.1038/s41598-018-23558-1","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41598-018-23558-1","pdf_url":"https://www.nature.com/articles/s41598-018-23558-1.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:4942600","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5980082","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:5980082","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5980082","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sci Rep","raw_type":"Text"},{"id":"pmid:29581461","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29581461","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific reports","raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:4c3e87b3523e400eb5c511e3cecde319","doi":null,"is_oa":false,"landing_page_url":"https://doaj.org/article/4c3e87b3523e400eb5c511e3cecde319","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Scientific Reports, Vol 8, Iss 1, Pp 1-12 (2018)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1038/s41598-018-23558-1","doi":"https://doi.org/10.1038/s41598-018-23558-1","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41598-018-23558-1","pdf_url":"https://www.nature.com/articles/s41598-018-23558-1.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G3914171058","display_name":"miR5298b\u8c03\u63a7\u7ea2\u8c46\u6749\u7ec6\u80de\u7d2b\u6749\u9187\u751f\u7269\u5408\u6210\u7684\u5206\u5b50\u673a\u5236","funder_award_id":"31670293","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4402522205","display_name":null,"funder_award_id":"31270342","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321883","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2806177680.pdf","grobid_xml":"https://content.openalex.org/works/W2806177680.grobid-xml"},"referenced_works_count":55,"referenced_works":["https://openalex.org/W199177223","https://openalex.org/W1496194585","https://openalex.org/W1520114066","https://openalex.org/W1562819720","https://openalex.org/W1581193770","https://openalex.org/W1628108294","https://openalex.org/W1796273699","https://openalex.org/W1975044934","https://openalex.org/W1984843046","https://openalex.org/W1986607177","https://openalex.org/W1986909319","https://openalex.org/W1997195601","https://openalex.org/W1999961900","https://openalex.org/W2010928721","https://openalex.org/W2011617931","https://openalex.org/W2014956626","https://openalex.org/W2017815014","https://openalex.org/W2021295704","https://openalex.org/W2026051604","https://openalex.org/W2028886234","https://openalex.org/W2029248286","https://openalex.org/W2044040938","https://openalex.org/W2048284172","https://openalex.org/W2052856932","https://openalex.org/W2063747799","https://openalex.org/W2067299834","https://openalex.org/W2078921567","https://openalex.org/W2093019594","https://openalex.org/W2102354900","https://openalex.org/W2107593640","https://openalex.org/W2109645877","https://openalex.org/W2113076881","https://openalex.org/W2125333911","https://openalex.org/W2125540345","https://openalex.org/W2135222648","https://openalex.org/W2135554806","https://openalex.org/W2141148093","https://openalex.org/W2149122308","https://openalex.org/W2151762155","https://openalex.org/W2153522847","https://openalex.org/W2156248428","https://openalex.org/W2160210528","https://openalex.org/W2165818994","https://openalex.org/W2168407867","https://openalex.org/W2261370384","https://openalex.org/W2316817117","https://openalex.org/W2335124897","https://openalex.org/W2394750864","https://openalex.org/W2404398830","https://openalex.org/W2550353553","https://openalex.org/W2604686947","https://openalex.org/W2620683489","https://openalex.org/W2746746492","https://openalex.org/W2750107294","https://openalex.org/W3201219341"],"related_works":["https://openalex.org/W1562819720","https://openalex.org/W3187851555","https://openalex.org/W2943645764","https://openalex.org/W2950260110","https://openalex.org/W2774485761","https://openalex.org/W3204085067","https://openalex.org/W2202459888","https://openalex.org/W2012908411","https://openalex.org/W4409735124","https://openalex.org/W4307944502"],"abstract_inverted_index":{"WRKY,":[0],"a":[1],"plant-specific":[2],"transcription":[3],"factor":[4],"family,":[5],"plays":[6],"important":[7],"roles":[8],"in":[9,34,37,190],"pathogen":[10],"defense,":[11],"abiotic":[12],"cues,":[13],"phytohormone":[14],"signaling,":[15],"and":[16,30,81,89,98,119,136,150,175],"regulation":[17],"of":[18,32,59,75,79,125,182,187,197,206],"plant":[19,198],"secondary":[20],"metabolism.":[21],"However,":[22],"little":[23],"is":[24],"known":[25],"about":[26],"the":[27,76,126,162,179],"roles,":[28],"functions,":[29],"mechanisms":[31],"WRKY":[33,65,77,188,199],"taxane":[35],"biosynthesis":[36],"Taxus":[38,48,191],"spp.":[39],"In":[40,172],"this":[41],"study,":[42],"61":[43],"transcripts":[44,61],"were":[45,68,92,105,129,139,153],"identified":[46],"from":[47],"chinensis":[49],"transcriptome":[50],"datasets":[51],"by":[52,131,155],"using":[53],"hidden":[54],"Markov":[55],"model":[56],"search.":[57],"All":[58],"these":[60],"encoded":[62],"proteins":[63],"containing":[64],"domains,":[66],"which":[67],"designated":[69],"as":[70],"TcWRKY1-61.":[71],"After":[72,114],"phylogenetic":[73],"analysis":[74],"domains":[78],"TcWRKYs":[80,91,104,128,165],"AtWRKYs,":[82],"16,":[83],"8,":[84],"10,":[85],"14,":[86],"5,":[87],"7,":[88],"1":[90],"cladded":[93],"into":[94],"Group":[95],"I,":[96],"IIa-IIe,":[97],"III,":[99],"respectively.":[100],"Then,":[101],"six":[102,127,163],"representative":[103],"selected":[106,164],"to":[107],"classify":[108],"their":[109],"effects":[110,168],"on":[111,169],"taxol":[112,170,207],"biosynthesis.":[113,171,208],"MeJA":[115,132],"(methyl":[116],"jasmonate":[117],"acid)":[118,122],"SA":[120,156],"(salicylic":[121],"treatments,":[123],"all":[124],"upregulated":[130],"treatment.":[133,157],"TcWRKY44":[134],"(IId)":[135],"TcWRKY47":[137,176],"(IIa)":[138],"upregulated,":[140],"whereas":[141],"TcWRKY8":[142,174],"(IIc),":[143],"TcWRKY20":[144],"(III),":[145],"TcWRKY26":[146],"(I),":[147],"TcWRKY41":[148],"(IIe),":[149],"TcWRKY52":[151],"(IIb)":[152],"downregulated":[154],"Overexpression":[158],"experiments":[159],"showed":[160],"that":[161],"exerted":[166],"different":[167],"specific,":[173],"significantly":[177],"improved":[178],"expression":[180],"levels":[181],"taxol-biosynthesis-related":[183],"genes.":[184],"Transcriptome-wide":[185],"identification":[186],"factors":[189,200],"not":[192],"only":[193],"enhances":[194],"our":[195],"understanding":[196],"but":[201],"also":[202],"identifies":[203],"candidate":[204],"regulators":[205]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":18},{"year":2023,"cited_by_count":11},{"year":2022,"cited_by_count":15},{"year":2021,"cited_by_count":12},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":1}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2018-06-13T00:00:00"}
