{"id":"https://openalex.org/W2799007282","doi":"https://doi.org/10.1101/305359","title":"Complementary chromosome folding by transcription factors and cohesin","display_name":"Complementary chromosome folding by transcription factors and cohesin","publication_year":2018,"publication_date":"2018-04-23","ids":{"openalex":"https://openalex.org/W2799007282","doi":"https://doi.org/10.1101/305359","mag":"2799007282"},"language":"en","primary_location":{"id":"doi:10.1101/305359","doi":"https://doi.org/10.1101/305359","is_oa":true,"landing_page_url":"https://doi.org/10.1101/305359","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2018/04/23/305359.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"volume":null,"type":"preprint","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.biorxiv.org/content/biorxiv/early/2018/04/23/305359.full.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003483674","display_name":"M. C. F. Pereira","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"M. C. F. Pereira","raw_affiliation_strings":["SUPA, School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, Edinburgh, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"SUPA, School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, Edinburgh, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062827068","display_name":"Chris A. Brackley","orcid":"https://orcid.org/0000-0002-5973-8179","observed_orcids":["https://orcid.org/0000-0002-5973-8179"]},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"C. A. Brackley","raw_affiliation_strings":["SUPA, School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, Edinburgh, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"SUPA, School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, Edinburgh, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066158937","display_name":"Davide Michieletto","orcid":"https://orcid.org/0000-0003-2186-6869","observed_orcids":["https://orcid.org/0000-0003-2186-6869"]},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"D. Michieletto","raw_affiliation_strings":["SUPA, School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, Edinburgh, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"SUPA, School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, Edinburgh, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088054119","display_name":"Carlo Annunziatella","orcid":"https://orcid.org/0000-0001-7175-4254","observed_orcids":["https://orcid.org/0000-0001-7175-4254"]},"institutions":[{"id":"https://openalex.org/I4210108560","display_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Napoli","ror":"https://ror.org/015kcdd40","country_code":"IT","type":"facility","lineage":["https://openalex.org/I160013858","https://openalex.org/I4210108560"]},{"id":"https://openalex.org/I71267560","display_name":"University of Naples Federico II","ror":"https://ror.org/05290cv24","country_code":"IT","type":"education","lineage":["https://openalex.org/I71267560"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"C. Annunziatella","raw_affiliation_strings":["Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant\u2019Angelo - 80126 Naples, Italy","Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant'Angelo - 8016 Naples, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant\u2019Angelo - 80126 Naples, Italy","institution_ids":["https://openalex.org/I4210108560","https://openalex.org/I71267560"]},{"raw_affiliation_string":"Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant'Angelo - 8016 Naples, Italy","institution_ids":["https://openalex.org/I4210108560","https://openalex.org/I71267560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027763337","display_name":"Simona Bianco","orcid":"https://orcid.org/0000-0001-5819-060X","observed_orcids":["https://orcid.org/0000-0001-5819-060X"]},"institutions":[{"id":"https://openalex.org/I4210108560","display_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Napoli","ror":"https://ror.org/015kcdd40","country_code":"IT","type":"facility","lineage":["https://openalex.org/I160013858","https://openalex.org/I4210108560"]},{"id":"https://openalex.org/I71267560","display_name":"University of Naples Federico II","ror":"https://ror.org/05290cv24","country_code":"IT","type":"education","lineage":["https://openalex.org/I71267560"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"S. Bianco","raw_affiliation_strings":["Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant\u2019Angelo - 80126 Naples, Italy","Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant'Angelo - 8016 Naples, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant\u2019Angelo - 80126 Naples, Italy","institution_ids":["https://openalex.org/I4210108560","https://openalex.org/I71267560"]},{"raw_affiliation_string":"Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant'Angelo - 8016 Naples, Italy","institution_ids":["https://openalex.org/I4210108560","https://openalex.org/I71267560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058085500","display_name":"Andrea M. Chiariello","orcid":"https://orcid.org/0000-0002-6112-0167","observed_orcids":["https://orcid.org/0000-0002-6112-0167"]},"institutions":[{"id":"https://openalex.org/I4210108560","display_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Napoli","ror":"https://ror.org/015kcdd40","country_code":"IT","type":"facility","lineage":["https://openalex.org/I160013858","https://openalex.org/I4210108560"]},{"id":"https://openalex.org/I71267560","display_name":"University of Naples Federico II","ror":"https://ror.org/05290cv24","country_code":"IT","type":"education","lineage":["https://openalex.org/I71267560"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"A. M. Chiariello","raw_affiliation_strings":["Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant\u2019Angelo - 80126 Naples, Italy","Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant'Angelo - 8016 Naples, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant\u2019Angelo - 80126 Naples, Italy","institution_ids":["https://openalex.org/I4210108560","https://openalex.org/I71267560"]},{"raw_affiliation_string":"Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant'Angelo - 8016 Naples, Italy","institution_ids":["https://openalex.org/I4210108560","https://openalex.org/I71267560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044366692","display_name":"Mario Nicodemi","orcid":"https://orcid.org/0000-0002-8416-6416","observed_orcids":["https://orcid.org/0000-0002-8416-6416"]},"institutions":[{"id":"https://openalex.org/I205582932","display_name":"Max Delbr\u00fcck Center","ror":"https://ror.org/04p5ggc03","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I205582932"]},{"id":"https://openalex.org/I4210108560","display_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Napoli","ror":"https://ror.org/015kcdd40","country_code":"IT","type":"facility","lineage":["https://openalex.org/I160013858","https://openalex.org/I4210108560"]},{"id":"https://openalex.org/I4210139777","display_name":"Berlin Institute of Health at Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/0493xsw21","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210139777","https://openalex.org/I7877124"]},{"id":"https://openalex.org/I71267560","display_name":"University of Naples Federico II","ror":"https://ror.org/05290cv24","country_code":"IT","type":"education","lineage":["https://openalex.org/I71267560"]}],"countries":["DE","IT"],"is_corresponding":false,"raw_author_name":"M. Nicodemi","raw_affiliation_strings":["Berlin Institute of Health (BIH), and Berlin Institute for Medical Systems Biology at the Max Delbruck Center for Molecular Medicine - 13125 Berlin, Germany","Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant\u2019Angelo - 80126 Naples, Italy","Berlin Institute of Health (BIH), and Berlin Institute for Medical Systems Biology at the Max Delbruck Center for Molecular Medicine - 1125 Berlin, Germany","Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant'Angelo - 8016 Naples, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Berlin Institute of Health (BIH), and Berlin Institute for Medical Systems Biology at the Max Delbruck Center for Molecular Medicine - 13125 Berlin, Germany","institution_ids":["https://openalex.org/I205582932","https://openalex.org/I4210139777"]},{"raw_affiliation_string":"Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant\u2019Angelo - 80126 Naples, Italy","institution_ids":["https://openalex.org/I4210108560","https://openalex.org/I71267560"]},{"raw_affiliation_string":"Berlin Institute of Health (BIH), and Berlin Institute for Medical Systems Biology at the Max Delbruck Center for Molecular Medicine - 1125 Berlin, Germany","institution_ids":["https://openalex.org/I205582932","https://openalex.org/I4210139777"]},{"raw_affiliation_string":"Dipartimento di Fisica, Universit\u00e0 degli Studi di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant'Angelo - 8016 Naples, Italy","institution_ids":["https://openalex.org/I4210108560","https://openalex.org/I71267560"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001134453","display_name":"Davide Marenduzzo","orcid":"https://orcid.org/0000-0003-3974-4915","observed_orcids":["https://orcid.org/0000-0003-3974-4915"]},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"D. Marenduzzo","raw_affiliation_strings":["SUPA, School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, Edinburgh, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"SUPA, School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, Edinburgh, UK","institution_ids":["https://openalex.org/I98677209"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13187","display_name":"Diffusion and Search Dynamics","score":0.00039999998989515007,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/chromosome-folding","display_name":"chromosome folding","score":0.7559999823570251},{"id":"https://openalex.org/keywords/interphase-chromosome-organization","display_name":"interphase chromosome organization","score":0.6190000176429749},{"id":"https://openalex.org/keywords/loop-extrusion","display_name":"loop extrusion","score":0.8019999861717224},{"id":"https://openalex.org/keywords/transcription-factors","display_name":"transcription factors","score":0.7789999842643738},{"id":"https://openalex.org/keywords/cohesin","display_name":"cohesin","score":0.996999979019165},{"id":"https://openalex.org/keywords/gene-deserts","display_name":"gene deserts","score":0.8690000176429749},{"id":"https://openalex.org/keywords/chromatin-domains","display_name":"chromatin domains","score":0.5239999890327454},{"id":"https://openalex.org/keywords/biophysical-modeling","display_name":"biophysical model","score":0.5659999847412109},{"id":"https://openalex.org/keywords/chromatin-condensation","display_name":"chromatin condensation","score":0.7639999985694885}],"concepts":[{"id":"https://openalex.org/C115821613","wikidata":"https://www.wikidata.org/wiki/Q21103063","display_name":"Cohesin","level":4,"score":0.906996488571167},{"id":"https://openalex.org/C2778760011","wikidata":"https://www.wikidata.org/wiki/Q21163346","display_name":"CTCF","level":5,"score":0.7886097431182861},{"id":"https://openalex.org/C83640560","wikidata":"https://www.wikidata.org/wiki/Q180951","display_name":"Chromatin","level":3,"score":0.757536768913269},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5997331142425537},{"id":"https://openalex.org/C93946551","wikidata":"https://www.wikidata.org/wiki/Q5113914","display_name":"Chromosome conformation capture","level":5,"score":0.5377957820892334},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.5238929986953735},{"id":"https://openalex.org/C29452124","wikidata":"https://www.wikidata.org/wiki/Q835950","display_name":"Interphase","level":2,"score":0.5231032371520996},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.507239043712616},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5054416656494141},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4939118027687073},{"id":"https://openalex.org/C179926584","wikidata":"https://www.wikidata.org/wiki/Q207714","display_name":"Transcription (linguistics)","level":2,"score":0.4914809465408325},{"id":"https://openalex.org/C2776545253","wikidata":"https://www.wikidata.org/wiki/Q5464292","display_name":"Folding (DSP implementation)","level":2,"score":0.44116345047950745},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.4347441494464874},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.420148104429245},{"id":"https://openalex.org/C2778354886","wikidata":"https://www.wikidata.org/wiki/Q5113927","display_name":"Chromosome segregation","level":4,"score":0.4126283824443817},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.38315635919570923},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.3621554970741272},{"id":"https://openalex.org/C111936080","wikidata":"https://www.wikidata.org/wiki/Q913367","display_name":"Enhancer","level":4,"score":0.1600932478904724},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.07583576440811157},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1101/305359","doi":"https://doi.org/10.1101/305359","is_oa":true,"landing_page_url":"https://doi.org/10.1101/305359","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2018/04/23/305359.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"}],"best_oa_location":{"id":"doi:10.1101/305359","doi":"https://doi.org/10.1101/305359","is_oa":true,"landing_page_url":"https://doi.org/10.1101/305359","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2018/04/23/305359.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1071030978","display_name":"EPSRC Centre for Doctoral Training in Condensed Matter Physics: Renewal of the CM-DTC","funder_award_id":"EP/L015110/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G1157197043","display_name":"San Diego Center for 4D Nucleome Research","funder_award_id":"U54DK107977","funder_id":"https://openalex.org/F4320337357","funder_display_name":"National Institute of Diabetes and Digestive and Kidney Diseases"},{"id":"https://openalex.org/G5121743235","display_name":"The physics of three dimensional chromosome and protein organisation within the cell","funder_award_id":"648050","funder_id":"https://openalex.org/F4320338335","funder_display_name":"H2020 European Research Council"}],"funders":[{"id":"https://openalex.org/F4320309590","display_name":"Universit\u00e0 degli Studi di Napoli Federico II","ror":"https://ror.org/05290cv24"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"},{"id":"https://openalex.org/F4320337357","display_name":"National Institute of Diabetes and Digestive and Kidney Diseases","ror":"https://ror.org/00adh9b73"},{"id":"https://openalex.org/F4320338335","display_name":"H2020 European Research Council","ror":"https://ror.org/0472cxd90"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2799007282.pdf","grobid_xml":"https://content.openalex.org/works/W2799007282.grobid-xml"},"referenced_works_count":50,"referenced_works":["https://openalex.org/W1831401007","https://openalex.org/W1973062929","https://openalex.org/W1974223852","https://openalex.org/W1989582360","https://openalex.org/W2004543727","https://openalex.org/W2019465613","https://openalex.org/W2023621898","https://openalex.org/W2027717396","https://openalex.org/W2028200156","https://openalex.org/W2029722028","https://openalex.org/W2035659472","https://openalex.org/W2036663020","https://openalex.org/W2056482755","https://openalex.org/W2070021921","https://openalex.org/W2073504534","https://openalex.org/W2082797919","https://openalex.org/W2088238021","https://openalex.org/W2090037139","https://openalex.org/W2092950915","https://openalex.org/W2098497185","https://openalex.org/W2100148696","https://openalex.org/W2101353820","https://openalex.org/W2103324856","https://openalex.org/W2143593606","https://openalex.org/W2145684083","https://openalex.org/W2146648681","https://openalex.org/W2162618509","https://openalex.org/W2171808845","https://openalex.org/W2229187524","https://openalex.org/W2231865019","https://openalex.org/W2259938310","https://openalex.org/W2267070684","https://openalex.org/W2288271511","https://openalex.org/W2332009504","https://openalex.org/W2338485081","https://openalex.org/W2344602241","https://openalex.org/W2401568148","https://openalex.org/W2470258573","https://openalex.org/W2526226937","https://openalex.org/W2543542605","https://openalex.org/W2555146308","https://openalex.org/W2561674325","https://openalex.org/W2594764564","https://openalex.org/W2607008467","https://openalex.org/W2609923598","https://openalex.org/W2610240247","https://openalex.org/W2614144400","https://openalex.org/W2694038906","https://openalex.org/W2722642526","https://openalex.org/W2750759895"],"related_works":["https://openalex.org/W4406554748","https://openalex.org/W7155379123","https://openalex.org/W4323825363","https://openalex.org/W2914600406","https://openalex.org/W2796109902","https://openalex.org/W3126733217","https://openalex.org/W4413348294","https://openalex.org/W6912822381","https://openalex.org/W2340540054","https://openalex.org/W4387895578"],"abstract_inverted_index":{"The":[0],"spatial":[1],"organisation":[2,17],"of":[3,83,115],"interphase":[4],"chromosomes":[5],"is":[6],"known":[7],"to":[8,68,80,97,109],"affect":[9],"genomic":[10],"function,":[11],"yet":[12],"the":[13,31,47,62,64,76,84],"principles":[14],"behind":[15],"such":[16],"remain":[18],"elusive.":[19],"Here,":[20],"we":[21,94,105],"first":[22],"compare":[23],"and":[24,35,40,54],"then":[25],"combine":[26],"two":[27],"well-known":[28],"biophysical":[29],"models,":[30,39],"transcription":[32,55],"factor":[33],"(TF)":[34],"loop":[36],"extrusion":[37,53],"(LE)":[38],"dissect":[41],"their":[42],"respective":[43],"roles":[44,59],"in":[45,60,87,102],"organising":[46],"genome.":[48],"Our":[49],"results":[50],"suggest":[51],"that":[52,96],"factors":[56],"play":[57],"complementary":[58],"folding":[61],"genome:":[63],"former":[65],"are":[66,78],"necessary":[67],"compact":[69],"gene":[70],"deserts":[71],"or":[72,90],"\u201cinert":[73],"chromatin\u201d":[74],"regions,":[75],"latter":[77],"sufficient":[79],"explain":[81],"most":[82],"structure":[85],"found":[86,101],"transcriptionally":[88],"active":[89],"repressed":[91],"domains.":[92],"Finally,":[93],"find":[95],"reproduce":[98],"interaction":[99],"patterns":[100],"HiC":[103],"experiments":[104],"do":[106],"not":[107],"need":[108],"postulate":[110],"an":[111],"explicit":[112],"motor":[113],"activity":[114],"cohesin":[116],"(or":[117],"other":[118],"extruding":[119],"factors):":[120],"a":[121],"model":[122],"where":[123],"co-hesin":[124],"molecules":[125],"behave":[126],"as":[127],"molecular":[128],"slip-links":[129],"sliding":[130],"diffusively":[131],"along":[132],"chromatin":[133],"works":[134],"equally":[135],"well.":[136]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":2}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2018-05-07T00:00:00"}
