{"id":"https://openalex.org/W2779564321","doi":"https://doi.org/10.1371/journal.pntd.0006113","title":"Development of a Multilocus Sequence Typing (MLST) scheme for Treponema pallidum subsp. pertenue: Application to yaws in Lihir Island, Papua New Guinea","display_name":"Development of a Multilocus Sequence Typing (MLST) scheme for Treponema pallidum subsp. pertenue: Application to yaws in Lihir Island, Papua New Guinea","publication_year":2017,"publication_date":"2017-12-27","ids":{"openalex":"https://openalex.org/W2779564321","doi":"https://doi.org/10.1371/journal.pntd.0006113","mag":"2779564321","pmid":"https://pubmed.ncbi.nlm.nih.gov/29281641","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/5760108"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pntd.0006113","doi":"https://doi.org/10.1371/journal.pntd.0006113","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pntd.0006113","pdf_url":"https://journals.plos.org/plosntds/article/file?id=10.1371/journal.pntd.0006113&type=printable","source":{"id":"https://openalex.org/S46544255","display_name":"PLoS neglected tropical diseases","issn_l":"1935-2727","issn":["1935-2727","1935-2735"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-2","ki-jl-1","medline","norway-1","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Neglected Tropical Diseases","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/plosntds/article/file?id=10.1371/journal.pntd.0006113&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046160946","display_name":"Charmie Godornes","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Charmie Godornes","raw_affiliation_strings":["Department of Medicine, University of Washington, Seattle, Washington, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicine, University of Washington, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040124310","display_name":"Lorenzo Giacani","orcid":"https://orcid.org/0000-0003-3889-7274","observed_orcids":["https://orcid.org/0000-0003-3889-7274"]},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lorenzo Giacani","raw_affiliation_strings":["Department of Global Health, University of Washington, Seattle, Washington, United States of America","Department of Medicine, University of Washington, Seattle, Washington, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Global Health, University of Washington, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Medicine, University of Washington, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084635606","display_name":"Alyssa E. Barry","orcid":"https://orcid.org/0000-0002-1189-2310","observed_orcids":["https://orcid.org/0000-0002-1189-2310"]},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I196021976","display_name":"Walter and Eliza Hall Institute of Medical Research","ror":"https://ror.org/01b6kha49","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I196021976"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Alyssa E. Barry","raw_affiliation_strings":["Department of Medical Biology, University of Melbourne, Parkville, Australia","Division of Population Health and Immunity, Walter and Eliza Hall Institute, Parkville, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Biology, University of Melbourne, Parkville, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"Division of Population Health and Immunity, Walter and Eliza Hall Institute, Parkville, Australia","institution_ids":["https://openalex.org/I196021976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108123691","display_name":"Jordi Mitj\u00e0","orcid":"https://orcid.org/0000-0003-3266-8868","observed_orcids":["https://orcid.org/0000-0003-3266-8868"]},"institutions":[{"id":"https://openalex.org/I164061489","display_name":"University of Papua New Guinea","ror":"https://ror.org/05jxf0p38","country_code":"PG","type":"education","lineage":["https://openalex.org/I164061489"]},{"id":"https://openalex.org/I4210148332","display_name":"Barcelona Institute for Global Health","ror":"https://ror.org/03hjgt059","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210148332","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES","PG"],"is_corresponding":false,"raw_author_name":"Oriol Mitja","raw_affiliation_strings":["Barcelona Institute for Global Health, Hospital Clinic-Universitat de Barcelona, Barcelona, Spain","Division of Public Health, School of Medicine and Health Sciences, University of Papua New Guinea, Port Moresby, Papua New Guinea","Lihir Medical Center, International SOS-Newcrest Mining, Lihir Island, Papua New Guinea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Barcelona Institute for Global Health, Hospital Clinic-Universitat de Barcelona, Barcelona, Spain","institution_ids":["https://openalex.org/I4210148332","https://openalex.org/I71999127"]},{"raw_affiliation_string":"Division of Public Health, School of Medicine and Health Sciences, University of Papua New Guinea, Port Moresby, Papua New Guinea","institution_ids":["https://openalex.org/I164061489"]},{"raw_affiliation_string":"Lihir Medical Center, International SOS-Newcrest Mining, Lihir Island, Papua New Guinea","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053928772","display_name":"Sheila A. Lukehart","orcid":"https://orcid.org/0000-0001-9778-3301","observed_orcids":["https://orcid.org/0000-0001-9778-3301"]},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Sheila A. Lukehart","raw_affiliation_strings":["Department of Global Health, University of Washington, Seattle, Washington, United States of America","Department of Medicine, University of Washington, Seattle, Washington, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-9778-3301","affiliations":[{"raw_affiliation_string":"Department of Global Health, University of Washington, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Medicine, University of Washington, Seattle, Washington, United States of America","institution_ids":["https://openalex.org/I201448701"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5053928772"],"corresponding_institution_ids":["https://openalex.org/I201448701"],"apc_list":{"value":2670,"currency":"USD","value_usd":2670},"apc_paid":{"value":2670,"currency":"USD","value_usd":2670},"fwci":3.7802,"has_fulltext":true,"cited_by_count":28,"citation_normalized_percentile":{"value":0.93899703,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"11","issue":"12","first_page":"e0006113","last_page":"e0006113"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11934","display_name":"Syphilis Diagnosis and Treatment","score":0.9413999915122986,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11934","display_name":"Syphilis Diagnosis and Treatment","score":0.9413999915122986,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10428","display_name":"Reproductive tract infections research","score":0.010099999606609344,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11688","display_name":"Microbial infections and disease research","score":0.005799999926239252,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/yaws","display_name":"yaws","score":0.843999981880188},{"id":"https://openalex.org/keywords/treponema-pallidum-subsp-pertenue","display_name":"Treponema pallidum subsp. pertenue","score":1.0},{"id":"https://openalex.org/keywords/multilocus-sequence-typing","display_name":"multilocus sequence typing","score":0.9959999918937683},{"id":"https://openalex.org/keywords/bacterial-typing","display_name":"strain typing","score":0.7089999914169312},{"id":"https://openalex.org/keywords/molecular-epidemiology","display_name":"molecular epidemiology","score":0.7990000247955322},{"id":"https://openalex.org/keywords/neglected-tropical-diseases","display_name":"neglected tropical diseases","score":0.796999990940094},{"id":"https://openalex.org/keywords/yaws-eradication","display_name":"yaws eradication","score":0.9100000262260437},{"id":"https://openalex.org/keywords/lihir-island","display_name":"Lihir Island","score":0.9399999976158142},{"id":"https://openalex.org/keywords/historical-isolates","display_name":"historical isolates","score":0.4959999918937683},{"id":"https://openalex.org/keywords/strain-differentiation","display_name":"strain differentiation","score":0.3799999952316284},{"id":"https://openalex.org/keywords/transmission-dynamics","display_name":"transmission dynamics","score":0.6359999775886536}],"concepts":[{"id":"https://openalex.org/C2780187896","wikidata":"https://www.wikidata.org/wiki/Q134745","display_name":"Treponema","level":4,"score":0.8633311986923218},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8588930368423462},{"id":"https://openalex.org/C77434933","wikidata":"https://www.wikidata.org/wiki/Q4043440","display_name":"Multilocus sequence typing","level":4,"score":0.8372620344161987},{"id":"https://openalex.org/C2781209916","wikidata":"https://www.wikidata.org/wiki/Q3215756","display_name":"Typing","level":2,"score":0.6780615448951721},{"id":"https://openalex.org/C2777474118","wikidata":"https://www.wikidata.org/wiki/Q1345671","display_name":"Tropical disease","level":3,"score":0.4798390567302704},{"id":"https://openalex.org/C190612196","wikidata":"https://www.wikidata.org/wiki/Q180502","display_name":"Parasitology","level":2,"score":0.4764443039894104},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.4345254898071289},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.39467138051986694},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.389736145734787},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.3511143922805786},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.2595328688621521},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.22117456793785095},{"id":"https://openalex.org/C2776983459","wikidata":"https://www.wikidata.org/wiki/Q41083","display_name":"Syphilis","level":3,"score":0.1812703013420105},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.07228627800941467},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C3013748606","wikidata":"https://www.wikidata.org/wiki/Q15787","display_name":"Human immunodeficiency virus (HIV)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002648","descriptor_name":"Child","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003906","descriptor_name":"Developing Countries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010219","descriptor_name":"Papua New Guinea","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014210","descriptor_name":"Treponema pallidum","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D014210","descriptor_name":"Treponema pallidum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014210","descriptor_name":"Treponema pallidum","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D015001","descriptor_name":"Yaws","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D015001","descriptor_name":"Yaws","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058885","descriptor_name":"Multilocus Sequence Typing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":8,"locations":[{"id":"doi:10.1371/journal.pntd.0006113","doi":"https://doi.org/10.1371/journal.pntd.0006113","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pntd.0006113","pdf_url":"https://journals.plos.org/plosntds/article/file?id=10.1371/journal.pntd.0006113&type=printable","source":{"id":"https://openalex.org/S46544255","display_name":"PLoS neglected tropical diseases","issn_l":"1935-2727","issn":["1935-2727","1935-2735"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-2","ki-jl-1","medline","norway-1","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Neglected Tropical Diseases","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:4689587","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5760108","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:5760108","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5760108","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Negl Trop Dis","raw_type":"Text"},{"id":"pmid:29281641","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29281641","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS neglected tropical diseases","raw_type":"Journal Article"},{"id":"pmh:oai:jupiter.its.unimelb.edu.au:11343/270662","doi":null,"is_oa":true,"landing_page_url":"https://hdl.handle.net/11343/270662","pdf_url":"http://hdl.handle.net/11343/270662","source":{"id":"https://openalex.org/S4377196259","display_name":"Minerva Access (University of Melbourne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I165779595","host_organization_name":"The University of Melbourne","host_organization_lineage":["https://openalex.org/I165779595"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:e0512393f1bf457fb3ba63eacc44edd2","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/e0512393f1bf457fb3ba63eacc44edd2","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Neglected Tropical Diseases, Vol 11, Iss 12, p e0006113 (2017)","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/20708593","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/journal_contribution/Development_of_a_Multilocus_Sequence_Typing_MLST_scheme_for_Treponema_pallidum_subsp_pertenue_Application_to_yaws_in_Lihir_Island_Papua_New_Guinea/20708593","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:figshare.com:article/5735811","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Development_of_a_Multilocus_Sequence_Typing_MLST_scheme_for_i_Treponema_pallidum_i_subsp_i_pertenue_i_Application_to_yaws_in_Lihir_Island_Papua_New_Guinea/5735811","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.1371/journal.pntd.0006113","doi":"https://doi.org/10.1371/journal.pntd.0006113","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pntd.0006113","pdf_url":"https://journals.plos.org/plosntds/article/file?id=10.1371/journal.pntd.0006113&type=printable","source":{"id":"https://openalex.org/S46544255","display_name":"PLoS neglected tropical diseases","issn_l":"1935-2727","issn":["1935-2727","1935-2735"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-2","ki-jl-1","medline","norway-1","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS Neglected Tropical Diseases","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.9391000270843506}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1247293174","display_name":"Treponema pallidum:Pathogenesis-associated molecules","funder_award_id":"R01AI042143","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2779564321.pdf","grobid_xml":"https://content.openalex.org/works/W2779564321.grobid-xml"},"referenced_works_count":56,"referenced_works":["https://openalex.org/W1483247593","https://openalex.org/W1505451689","https://openalex.org/W1582810658","https://openalex.org/W1601074126","https://openalex.org/W1980388270","https://openalex.org/W1982085796","https://openalex.org/W1990875551","https://openalex.org/W1995835920","https://openalex.org/W1995860488","https://openalex.org/W2000081191","https://openalex.org/W2004417344","https://openalex.org/W2011376578","https://openalex.org/W2016492626","https://openalex.org/W2021820761","https://openalex.org/W2038499944","https://openalex.org/W2041319776","https://openalex.org/W2043937846","https://openalex.org/W2049757748","https://openalex.org/W2058022364","https://openalex.org/W2065168934","https://openalex.org/W2070969196","https://openalex.org/W2072207486","https://openalex.org/W2072827868","https://openalex.org/W2081438866","https://openalex.org/W2083118512","https://openalex.org/W2086175385","https://openalex.org/W2103719941","https://openalex.org/W2113425181","https://openalex.org/W2123851577","https://openalex.org/W2135851587","https://openalex.org/W2136537149","https://openalex.org/W2139731381","https://openalex.org/W2144594468","https://openalex.org/W2164220424","https://openalex.org/W2170052461","https://openalex.org/W2256827449","https://openalex.org/W2311203695","https://openalex.org/W2316335359","https://openalex.org/W2319095734","https://openalex.org/W2319377630","https://openalex.org/W2331446903","https://openalex.org/W2332733322","https://openalex.org/W2395445624","https://openalex.org/W2395844065","https://openalex.org/W2416064999","https://openalex.org/W2462625281","https://openalex.org/W2480737494","https://openalex.org/W2592346369","https://openalex.org/W2605326115","https://openalex.org/W2605598171","https://openalex.org/W2741706903","https://openalex.org/W2752728395","https://openalex.org/W3024033082","https://openalex.org/W4211191365","https://openalex.org/W4237708457","https://openalex.org/W6671397699"],"related_works":["https://openalex.org/W2891208816","https://openalex.org/W4390495136","https://openalex.org/W7039323204","https://openalex.org/W2117395945","https://openalex.org/W2766483476","https://openalex.org/W2896736307","https://openalex.org/W2168998644","https://openalex.org/W4403802011","https://openalex.org/W4386702720","https://openalex.org/W2075826938"],"abstract_inverted_index":{"BACKGROUND:":[0],"Yaws":[1],"is":[2,274],"a":[3,32,49,96,106,139,260],"neglected":[4],"tropical":[5,27],"disease,":[6],"caused":[7],"by":[8,38],"Treponema":[9,101],"pallidum":[10,59,79,83,146,271],"subsp.":[11,60,80,147,272],"pertenue.":[12],"The":[13],"disease":[14,63],"causes":[15],"chronic":[16],"lesions,":[17],"primarily":[18],"in":[19,23,26,114,223,267],"young":[20],"children":[21],"living":[22],"remote":[24],"villages":[25],"climates.":[28],"As":[29],"part":[30],"of":[31,57,75,77,98,108,153,166,219,253,280,284],"global":[33],"yaws":[34,111,188,201,254,285,291],"eradication":[35,292],"campaign":[36,293],"initiated":[37],"the":[39,92,144,163,167,190,277,290],"World":[40],"Health":[41],"Organization,":[42],"we":[43],"sought":[44],"to":[45,53,86,137,161,184,263,294],"develop":[46],"and":[47,65,82,132,194,226,237,251,288],"evaluate":[48],"molecular":[50,214,249],"typing":[51,168,179,250],"method":[52,181,257],"distinguish":[54],"different":[55],"strains":[56,76],"T.":[58,78,145,270],"pertenue":[61,81,148,273],"for":[62],"control":[64],"epidemiological":[66,265],"purposes.":[67],"METHODS":[68],"AND":[69],"PRINCIPAL":[70],"FINDINGS:":[71],"Published":[72],"genome":[73],"sequences":[74],"were":[84,120,134,158,216,221,239],"compared":[85],"identify":[87],"polymorphic":[88],"genetic":[89],"loci":[90],"among":[91,143,228],"strains.":[93,255],"DNA":[94,195],"from":[95,110,196,200],"number":[97],"existing":[99,185],"historical":[100,186,229],"isolates,":[102],"as":[103,105],"well":[104],"subset":[107],"samples":[109,149,211,225],"patients":[112,202],"collected":[113],"Lihir":[115,204,242],"Island,":[116,205],"Papua":[117,206],"New":[118,207],"Guinea,":[119],"analyzed":[121],"using":[122,170],"these":[123,126,154],"targets.":[124],"From":[125],"data,":[127],"three":[128,155],"genes":[129,157],"(tp0548,":[130],"tp0136":[131],"tp0326)":[133],"ultimately":[135],"selected":[136,160],"give":[138],"high":[140],"discriminating":[141,164],"capability":[142,165],"tested.":[150],"Intragenic":[151],"regions":[152,268],"target":[156],"then":[159],"enhance":[162],"scheme":[169],"short":[171],"readily":[172],"amplifiable":[173],"loci.":[174],"This":[175,245,256],"3-gene":[176],"multilocus":[177],"sequence":[178],"(MLST)":[180],"was":[182],"applied":[183],"human":[187],"strains,":[189],"Fribourg-Blanc":[191],"simian":[192],"isolate,":[193],"194":[197],"lesion":[198],"swabs":[199],"on":[203,241],"Guinea.":[208],"Among":[209],"all":[210],"tested,":[212],"fourteen":[213],"types":[215,234],"identified,":[217],"seven":[218,227],"which":[220],"found":[222],"patient":[224],"isolates":[230],"or":[231],"DNA.":[232],"Three":[233],"(JG8,":[235],"TD6,":[236],"SE7)":[238],"predominant":[240],"Island.":[243],"CONCLUSIONS:":[244],"MLST":[246],"approach":[247],"allows":[248],"differentiation":[252],"could":[258],"be":[259],"useful":[261],"tool":[262],"complement":[264],"studies":[266],"where":[269],"prevalent":[275],"with":[276],"overall":[278],"goals":[279],"improving":[281],"our":[282],"understanding":[283],"transmission":[286],"dynamics":[287],"helping":[289],"succeed.":[295]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":10}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2018-01-05T00:00:00"}
