{"id":"https://openalex.org/W2776860031","doi":"https://doi.org/10.1107/s0108767317096921","title":"Super resolution for X-ray scattering and biological insights from its applications to dynamic DNA replication and repair complexes","display_name":"Super resolution for X-ray scattering and biological insights from its applications to dynamic DNA replication and repair complexes","publication_year":2017,"publication_date":"2017-05-26","ids":{"openalex":"https://openalex.org/W2776860031","doi":"https://doi.org/10.1107/s0108767317096921","mag":"2776860031"},"language":"en","primary_location":{"id":"doi:10.1107/s0108767317096921","doi":"https://doi.org/10.1107/s0108767317096921","is_oa":true,"landing_page_url":"https://doi.org/10.1107/s0108767317096921","pdf_url":"http://journals.iucr.org/a/issues/2017/a1/00/a54957/a54957.pdf","source":{"id":"https://openalex.org/S4393918093","display_name":"Acta Crystallographica Section A Foundations and Advances","issn_l":"2053-2733","issn":["2053-2733"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","jufo-1","medline","norway-1","poland-200","russia-white-list-2"],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Acta Crystallographica Section A Foundations and Advances","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"http://journals.iucr.org/a/issues/2017/a1/00/a54957/a54957.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059713279","display_name":"John A. Tainer","orcid":"https://orcid.org/0000-0003-1659-2429","observed_orcids":["https://orcid.org/0000-0003-1659-2429"]},"institutions":[{"id":"https://openalex.org/I1343551460","display_name":"The University of Texas MD Anderson Cancer Center","ror":"https://ror.org/04twxam07","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1343551460"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John A. Tainer","raw_affiliation_strings":["Department of Molecular and Cellular Oncology, The University of Texas M. D. Anderson Cancer Center, Houston, TX 77030, USA","Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular and Cellular Oncology, The University of Texas M. D. Anderson Cancer Center, Houston, TX 77030, USA","institution_ids":["https://openalex.org/I1343551460"]},{"raw_affiliation_string":"Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA","institution_ids":["https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079924550","display_name":"Susan E. Tsutakawa","orcid":"https://orcid.org/0000-0002-4918-4571","observed_orcids":["https://orcid.org/0000-0002-4918-4571"]},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susan E. Tsutakawa","raw_affiliation_strings":["Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA","institution_ids":["https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042886731","display_name":"Greg L. Hura","orcid":"https://orcid.org/0000-0003-0501-8464","observed_orcids":["https://orcid.org/0000-0003-0501-8464"]},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Greg L. Hura","raw_affiliation_strings":["Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA","institution_ids":["https://openalex.org/I148283060"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032701796","display_name":"Michal Hammel","orcid":"https://orcid.org/0000-0002-5610-9289","observed_orcids":["https://orcid.org/0000-0002-5610-9289"]},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michal Hammel","raw_affiliation_strings":["Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA","institution_ids":["https://openalex.org/I148283060"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4430,"currency":"USD","value_usd":4430},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.20748454,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"73","issue":"a1","first_page":"a314","last_page":"a314"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9804999828338623,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9804999828338623,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.017999999225139618,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11183","display_name":"Advanced X-ray Imaging Techniques","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/3108","display_name":"Radiation"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biosaxs","display_name":"biological small angle X-ray scattering","score":0.875},{"id":"https://openalex.org/keywords/super-resolution","display_name":"super-resolution","score":0.6809999942779541},{"id":"https://openalex.org/keywords/dna-replication-complex","display_name":"DNA replication complex","score":0.765999972820282},{"id":"https://openalex.org/keywords/dna-repair-complexes","display_name":"DNA repair complexes","score":0.9950000047683716},{"id":"https://openalex.org/keywords/solution-conformation","display_name":"solution conformation","score":0.6660000085830688},{"id":"https://openalex.org/keywords/macromolecular-flexibility","display_name":"macromolecular flexibility","score":0.902999997138977},{"id":"https://openalex.org/keywords/conformational-states","display_name":"conformational states","score":0.7829999923706055},{"id":"https://openalex.org/keywords/macromolecular-complexes","display_name":"macromolecular complexes","score":0.843999981880188},{"id":"https://openalex.org/keywords/high-throughput-structural-biology","display_name":"high-throughput structural biology","score":0.8790000081062317}],"concepts":[{"id":"https://openalex.org/C12590798","wikidata":"https://www.wikidata.org/wiki/Q3933199","display_name":"Replication (statistics)","level":2,"score":0.7323914766311646},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.5550800561904907},{"id":"https://openalex.org/C138268822","wikidata":"https://www.wikidata.org/wiki/Q1051925","display_name":"Resolution (logic)","level":2,"score":0.5253384113311768},{"id":"https://openalex.org/C73573662","wikidata":"https://www.wikidata.org/wiki/Q130996","display_name":"DNA replication","level":3,"score":0.4893914759159088},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.3318755328655243},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3240300416946411},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.28318458795547485},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2243117094039917},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18415862321853638},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.0577051043510437},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1107/s0108767317096921","doi":"https://doi.org/10.1107/s0108767317096921","is_oa":true,"landing_page_url":"https://doi.org/10.1107/s0108767317096921","pdf_url":"http://journals.iucr.org/a/issues/2017/a1/00/a54957/a54957.pdf","source":{"id":"https://openalex.org/S4393918093","display_name":"Acta Crystallographica Section A Foundations and Advances","issn_l":"2053-2733","issn":["2053-2733"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","jufo-1","medline","norway-1","poland-200","russia-white-list-2"],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Acta Crystallographica Section A Foundations and Advances","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1107/s0108767317096921","doi":"https://doi.org/10.1107/s0108767317096921","is_oa":true,"landing_page_url":"https://doi.org/10.1107/s0108767317096921","pdf_url":"http://journals.iucr.org/a/issues/2017/a1/00/a54957/a54957.pdf","source":{"id":"https://openalex.org/S4393918093","display_name":"Acta Crystallographica Section A Foundations and Advances","issn_l":"2053-2733","issn":["2053-2733"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","jufo-1","medline","norway-1","poland-200","russia-white-list-2"],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Acta Crystallographica Section A Foundations and Advances","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2776860031.pdf","grobid_xml":"https://content.openalex.org/works/W2776860031.grobid-xml"},"referenced_works_count":6,"referenced_works":["https://openalex.org/W1984896911","https://openalex.org/W1995586409","https://openalex.org/W2130779427","https://openalex.org/W2142654956","https://openalex.org/W2145707329","https://openalex.org/W2571466096"],"related_works":["https://openalex.org/W2557253528","https://openalex.org/W4323353039","https://openalex.org/W2014268727","https://openalex.org/W2480949230","https://openalex.org/W1991363903","https://openalex.org/W2778152530","https://openalex.org/W2130779427","https://openalex.org/W2291304446","https://openalex.org/W1680631003","https://openalex.org/W3003294403"],"abstract_inverted_index":{"Biological":[0],"small":[1],"angle":[2],"X-ray":[3],"scattering":[4],"(BioSAXS)":[5],"is":[6,35],"an":[7],"under":[8,11,100],"appreciated":[9],"and":[10,22,54,62,75,96,132,150,161,169],"utilized":[12],"method":[13],"for":[14,145,157],"structural":[15,40],"analyses":[16],"that":[17,24,81,137],"accuractely":[18],"defines":[19],"solution":[20,102,136],"conformations":[21,134],"assemblies":[23],"are":[25,155],"directly":[26],"relevant":[27,156],"to":[28,31,88,122],"connecting":[29],"structures":[30],"biological":[32],"insights.":[33],"Bio-SAXS":[34],"the":[36,48],"only":[37],"true":[38],"high-throughput":[39,99],"biology":[41,139,168],"method.":[42],"It":[43],"furthermore":[44],"provides":[45],"information":[46],"on":[47,68,115],"entire":[49],"complex":[50],"including":[51],"both":[52],"ordered":[53],"flexible":[55,94],"regions":[56],"when":[57],"interpreted":[58],"with":[59,105,112],"appropriate":[60],"metrics":[61],"methods.":[63],"We":[64],"will":[65,79,109,119],"present":[66],"data":[67],"dynamic":[69],"complexes":[70],"acting":[71],"in":[72,98,135,140,166],"DNA":[73],"replication":[74],"repair.":[76],"The":[77,143],"results":[78,108],"show":[80,123],"SAXS":[82,125],"can":[83,126],"probe":[84],"at":[85],"resolutions":[86],"sufficient":[87],"distinguish":[89],"different":[90],"conformational":[91,148],"states,":[92,131],"characterize":[93],"macromolecules,":[95],"screen":[97],"most":[101],"conditions.":[103],"Methods":[104],"exemplary":[106],"experimental":[107],"be":[110,120],"considered":[111],"a":[113],"focus":[114],"interpretation":[116],"tools.":[117],"Results":[118],"presented":[121],"how":[124],"provide":[127],"accurate":[128,158],"shapes,":[129],"assembly":[130,151],"comprehensive":[133],"inform":[138],"fundamental":[141],"ways":[142],"approaches":[144],"measuring":[146],"flexibility,":[147],"changes,":[149],"processes":[152],"discussed":[153],"here":[154],"understanding,":[159],"simulation,":[160],"prediction":[162],"of":[163],"many":[164],"mechanisms":[165],"cell":[167],"nanotechnology.":[170]},"counts_by_year":[],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2018-01-05T00:00:00"}
