{"id":"https://openalex.org/W2767587403","doi":"https://doi.org/10.1038/s41467-017-01683-1","title":"Shaping bacterial population behavior through computer-interfaced control of individual cells","display_name":"Shaping bacterial population behavior through computer-interfaced control of individual cells","publication_year":2017,"publication_date":"2017-11-10","ids":{"openalex":"https://openalex.org/W2767587403","doi":"https://doi.org/10.1038/s41467-017-01683-1","mag":"2767587403","pmid":"https://pubmed.ncbi.nlm.nih.gov/29142298","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/5688142"},"language":"en","primary_location":{"id":"doi:10.1038/s41467-017-01683-1","doi":"https://doi.org/10.1038/s41467-017-01683-1","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41467-017-01683-1","pdf_url":"https://www.nature.com/articles/s41467-017-01683-1.pdf","source":{"id":"https://openalex.org/S64187185","display_name":"Nature Communications","issn_l":"2041-1723","issn":["2041-1723"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Communications","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.nature.com/articles/s41467-017-01683-1.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081014991","display_name":"Remy Chait","orcid":"https://orcid.org/0000-0003-0876-3187","observed_orcids":["https://orcid.org/0000-0003-0876-3187"]},"institutions":[{"id":"https://openalex.org/I157556583","display_name":"Institute of Science and Technology Austria","ror":"https://ror.org/03gnh5541","country_code":"AT","type":"education","lineage":["https://openalex.org/I157556583"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Remy Chait","raw_affiliation_strings":["Institute of Science and Technology Austria, Klosterneuburg, 3400, Austria","IST Austria - Institute of Science and Technology [Klosterneuburg, Austria] (IST Austria Am Campus 1 3400 Klosterneuburg Austria - Austria)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Science and Technology Austria, Klosterneuburg, 3400, Austria","institution_ids":["https://openalex.org/I157556583"]},{"raw_affiliation_string":"IST Austria - Institute of Science and Technology [Klosterneuburg, Austria] (IST Austria Am Campus 1 3400 Klosterneuburg Austria - Austria)","institution_ids":["https://openalex.org/I157556583"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015991909","display_name":"Jakob Ruess","orcid":"https://orcid.org/0000-0003-1615-3282","observed_orcids":["https://orcid.org/0000-0003-1615-3282"]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I157556583","display_name":"Institute of Science and Technology Austria","ror":"https://ror.org/03gnh5541","country_code":"AT","type":"education","lineage":["https://openalex.org/I157556583"]},{"id":"https://openalex.org/I4210126360","display_name":"Centre Inria de Saclay","ror":"https://ror.org/0315e5x55","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210126360"]},{"id":"https://openalex.org/I4405260123","display_name":"LIFEWARE: Computational systems biology and optimization","ror":"https://ror.org/039v8sa14","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210126360","https://openalex.org/I4405260123"]}],"countries":["AT","FR"],"is_corresponding":false,"raw_author_name":"Jakob Ruess","raw_affiliation_strings":["Inria Saclay, Ile-de-France, Palaiseau, 91120, France","Institut Pasteur, 75724, Paris Cedex 15, France","Institute of Science and Technology Austria, Klosterneuburg, 3400, Austria","IP - Institut Pasteur [Paris] (25-28, rue du docteur Roux, 75724 Paris cedex 15 - France)","IST Austria - Institute of Science and Technology [Klosterneuburg, Austria] (IST Austria Am Campus 1 3400 Klosterneuburg Austria - Austria)","Lifeware - Computational systems biology and optimization (France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Inria Saclay, Ile-de-France, Palaiseau, 91120, France","institution_ids":["https://openalex.org/I4210126360"]},{"raw_affiliation_string":"Institut Pasteur, 75724, Paris Cedex 15, France","institution_ids":["https://openalex.org/I157536573"]},{"raw_affiliation_string":"Institute of Science and Technology Austria, Klosterneuburg, 3400, Austria","institution_ids":["https://openalex.org/I157556583"]},{"raw_affiliation_string":"IP - Institut Pasteur [Paris] (25-28, rue du docteur Roux, 75724 Paris cedex 15 - France)","institution_ids":["https://openalex.org/I157536573"]},{"raw_affiliation_string":"IST Austria - Institute of Science and Technology [Klosterneuburg, Austria] (IST Austria Am Campus 1 3400 Klosterneuburg Austria - Austria)","institution_ids":["https://openalex.org/I157556583"]},{"raw_affiliation_string":"Lifeware - Computational systems biology and optimization (France)","institution_ids":["https://openalex.org/I4405260123"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037272887","display_name":"Tobias Bergmiller","orcid":"https://orcid.org/0000-0001-5396-4346","observed_orcids":["https://orcid.org/0000-0001-5396-4346"]},"institutions":[{"id":"https://openalex.org/I157556583","display_name":"Institute of Science and Technology Austria","ror":"https://ror.org/03gnh5541","country_code":"AT","type":"education","lineage":["https://openalex.org/I157556583"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Tobias Bergmiller","raw_affiliation_strings":["Institute of Science and Technology Austria, Klosterneuburg, 3400, Austria","IST Austria - Institute of Science and Technology [Klosterneuburg, Austria] (IST Austria Am Campus 1 3400 Klosterneuburg Austria - Austria)"],"raw_orcid":"https://orcid.org/0000-0001-5396-4346","affiliations":[{"raw_affiliation_string":"Institute of Science and Technology Austria, Klosterneuburg, 3400, Austria","institution_ids":["https://openalex.org/I157556583"]},{"raw_affiliation_string":"IST Austria - Institute of Science and Technology [Klosterneuburg, Austria] (IST Austria Am Campus 1 3400 Klosterneuburg Austria - Austria)","institution_ids":["https://openalex.org/I157556583"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027436146","display_name":"Ga\u0161per Tka\u010dik","orcid":"https://orcid.org/0000-0002-6699-1455","observed_orcids":["https://orcid.org/0000-0002-6699-1455"]},"institutions":[{"id":"https://openalex.org/I157556583","display_name":"Institute of Science and Technology Austria","ror":"https://ror.org/03gnh5541","country_code":"AT","type":"education","lineage":["https://openalex.org/I157556583"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Ga\u0161per Tka\u010dik","raw_affiliation_strings":["Institute of Science and Technology Austria, Klosterneuburg, 3400, Austria","IST Austria - Institute of Science and Technology [Klosterneuburg, Austria] (IST Austria Am Campus 1 3400 Klosterneuburg Austria - Austria)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Science and Technology Austria, Klosterneuburg, 3400, Austria","institution_ids":["https://openalex.org/I157556583"]},{"raw_affiliation_string":"IST Austria - Institute of Science and Technology [Klosterneuburg, Austria] (IST Austria Am Campus 1 3400 Klosterneuburg Austria - Austria)","institution_ids":["https://openalex.org/I157556583"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5046318185","display_name":"C\u0103lin C. Guet","orcid":"https://orcid.org/0000-0001-6220-2052","observed_orcids":["https://orcid.org/0000-0001-6220-2052"]},"institutions":[{"id":"https://openalex.org/I157556583","display_name":"Institute of Science and Technology Austria","ror":"https://ror.org/03gnh5541","country_code":"AT","type":"education","lineage":["https://openalex.org/I157556583"]}],"countries":["AT"],"is_corresponding":true,"raw_author_name":"C\u0103lin C. Guet","raw_affiliation_strings":["Institute of Science and Technology Austria, Klosterneuburg, 3400, Austria. calin@ist.ac.at","IST Austria - Institute of Science and Technology [Klosterneuburg, Austria] (IST Austria Am Campus 1 3400 Klosterneuburg Austria - Austria)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Science and Technology Austria, Klosterneuburg, 3400, Austria. calin@ist.ac.at","institution_ids":["https://openalex.org/I157556583"]},{"raw_affiliation_string":"IST Austria - Institute of Science and Technology [Klosterneuburg, Austria] (IST Austria Am Campus 1 3400 Klosterneuburg Austria - Austria)","institution_ids":["https://openalex.org/I157556583"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5046318185"],"corresponding_institution_ids":["https://openalex.org/I157556583"],"apc_list":{"value":6990,"currency":"USD","value_usd":6990},"apc_paid":{"value":4440,"currency":"EUR","value_usd":4788},"fwci":3.9941,"has_fulltext":true,"cited_by_count":105,"citation_normalized_percentile":{"value":0.95391465,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"8","issue":"1","first_page":"1535","last_page":"1535"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9193999767303467,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9193999767303467,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.032499998807907104,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10593","display_name":"Bacterial biofilms and quorum sensing","score":0.019999999552965164,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.9660000205039978},{"id":"https://openalex.org/keywords/antibiotic-perturbation","display_name":"antibiotic perturbation","score":0.9480000138282776},{"id":"https://openalex.org/keywords/bacterial-communication","display_name":"bacterial communication","score":0.6600000262260437},{"id":"https://openalex.org/keywords/synthetic-biology","display_name":"synthetic biology","score":0.3179999887943268}],"concepts":[{"id":"https://openalex.org/C50738837","wikidata":"https://www.wikidata.org/wiki/Q781492","display_name":"Optogenetics","level":2,"score":0.7257192134857178},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.697608470916748},{"id":"https://openalex.org/C191908910","wikidata":"https://www.wikidata.org/wiki/Q862838","display_name":"Synthetic biology","level":2,"score":0.5868960618972778},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5376580357551575},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.46504533290863037},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.45423856377601624},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.4310700297355652},{"id":"https://openalex.org/C2775945657","wikidata":"https://www.wikidata.org/wiki/Q381442","display_name":"Structuring","level":2,"score":0.4233919084072113},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.4209117591381073},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4046889543533325},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.3400208353996277},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.28796762228012085},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.1932438611984253},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18844720721244812},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C10138342","wikidata":"https://www.wikidata.org/wiki/Q43015","display_name":"Finance","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D005828","descriptor_name":"Genetics, Population","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015964","descriptor_name":"Gene Expression Regulation, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D062308","descriptor_name":"Optogenetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":9,"locations":[{"id":"doi:10.1038/s41467-017-01683-1","doi":"https://doi.org/10.1038/s41467-017-01683-1","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41467-017-01683-1","pdf_url":"https://www.nature.com/articles/s41467-017-01683-1.pdf","source":{"id":"https://openalex.org/S64187185","display_name":"Nature Communications","issn_l":"2041-1723","issn":["2041-1723"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Communications","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:4603752","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5688142","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmid:29142298","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29142298","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature communications","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5688142","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC5688142/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nat Commun","raw_type":"Text"},{"id":"pmh:oai:HAL:hal-01669883v1","doi":null,"is_oa":true,"landing_page_url":"https://inria.hal.science/hal-01669883","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4405252976","host_organization_name":"Centre pour la Communication Scientifique Directe","host_organization_lineage":["https://openalex.org/I4405252976"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nature Communications, 2017, 8 (1), pp.1535. &#x27E8;10.1038/s41467-017-01683-1&#x27E9;","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:RePEc:nat:natcom:v:8:y:2017:i:1:d:10.1038_s41467-017-01683-1","doi":null,"is_oa":false,"landing_page_url":"https://www.nature.com/articles/s41467-017-01683-1","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:1fadea4a2a1341e78b4f878004e369cc","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/1fadea4a2a1341e78b4f878004e369cc","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nature Communications, Vol 8, Iss 1, Pp 1-11 (2017)","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/29752892","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/journal_contribution/Shaping_bacterial_population_behavior_through_computer-interfaced_control_of_individual_cells/29752892","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:ore.exeter.ac.uk:10871/36470","doi":null,"is_oa":true,"landing_page_url":"http://hdl.handle.net/10871/36470","pdf_url":null,"source":{"id":"https://openalex.org/S4306401998","display_name":"Open Research Exeter (University of Exeter)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I23923803","host_organization_name":"University of Exeter","host_organization_lineage":["https://openalex.org/I23923803"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1038/s41467-017-01683-1","doi":"https://doi.org/10.1038/s41467-017-01683-1","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41467-017-01683-1","pdf_url":"https://www.nature.com/articles/s41467-017-01683-1.pdf","source":{"id":"https://openalex.org/S64187185","display_name":"Nature Communications","issn_l":"2041-1723","issn":["2041-1723"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Communications","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1536877525","display_name":null,"funder_award_id":"FWF P28844","funder_id":"https://openalex.org/F4320321181","funder_display_name":"Austrian Science Fund"},{"id":"https://openalex.org/G3207356259","display_name":null,"funder_award_id":"2007\u20132013","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G393177772","display_name":null,"funder_award_id":"FP7 2007-2013","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5217321011","display_name":"Biophysics of information processing in gene regulation","funder_award_id":"P28844","funder_id":"https://openalex.org/F4320321181","funder_display_name":"Austrian Science Fund"},{"id":"https://openalex.org/G5545594079","display_name":"Des mod\u00e8les de population aux populations de mod\u00e8les: observation, mod\u00e9lisation et contr\u00f4le de l'expression g\u00e9nique au niveau de la cellule unique","funder_award_id":"ANR-10-BINF-0006","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G5702163051","display_name":null,"funder_award_id":"FP7/2007","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G6658030547","display_name":"International IST Postdoctoral Fellowship Programme","funder_award_id":"291734","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G7240651115","display_name":null,"funder_award_id":"ANR-10","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G7428494302","display_name":null,"funder_award_id":"ANR-16-CE12","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G8807832921","display_name":"Computer aided Control of Gene Expression","funder_award_id":"ANR-16-CE12-0025","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G8907879167","display_name":"Mixed-Effects Models of Intracellular Processes: Methods, Tools and Applications","funder_award_id":"ANR-16-CE33-0018","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320315473","display_name":"Institute of Science and Technology Austria","ror":"https://ror.org/03gnh5541"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320321181","display_name":"Austrian Science Fund","ror":"https://ror.org/013tf3c58"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2767587403.pdf","grobid_xml":"https://content.openalex.org/works/W2767587403.grobid-xml"},"referenced_works_count":54,"referenced_works":["https://openalex.org/W1494581922","https://openalex.org/W1503248986","https://openalex.org/W1557270760","https://openalex.org/W1938292773","https://openalex.org/W1963836821","https://openalex.org/W1973577260","https://openalex.org/W1973943921","https://openalex.org/W1974927036","https://openalex.org/W1979723177","https://openalex.org/W1980774547","https://openalex.org/W1991780313","https://openalex.org/W1994794118","https://openalex.org/W1994918274","https://openalex.org/W1996666978","https://openalex.org/W2009265628","https://openalex.org/W2019032212","https://openalex.org/W2026148048","https://openalex.org/W2026413400","https://openalex.org/W2028287684","https://openalex.org/W2030945597","https://openalex.org/W2044085601","https://openalex.org/W2057013484","https://openalex.org/W2070876566","https://openalex.org/W2074472034","https://openalex.org/W2076505260","https://openalex.org/W2079593650","https://openalex.org/W2081970839","https://openalex.org/W2101937561","https://openalex.org/W2103600799","https://openalex.org/W2106411386","https://openalex.org/W2111967267","https://openalex.org/W2114228460","https://openalex.org/W2119435255","https://openalex.org/W2125108766","https://openalex.org/W2125448515","https://openalex.org/W2126818364","https://openalex.org/W2127240867","https://openalex.org/W2132828256","https://openalex.org/W2137753785","https://openalex.org/W2140405224","https://openalex.org/W2144821695","https://openalex.org/W2149035803","https://openalex.org/W2166751342","https://openalex.org/W2170290922","https://openalex.org/W2268587872","https://openalex.org/W2295190630","https://openalex.org/W2323723611","https://openalex.org/W2507618556","https://openalex.org/W2531578105","https://openalex.org/W2575126330","https://openalex.org/W2607462092","https://openalex.org/W2804461679","https://openalex.org/W4232357596","https://openalex.org/W7098852363"],"related_works":["https://openalex.org/W2065833295","https://openalex.org/W4291954805","https://openalex.org/W1988544600","https://openalex.org/W2126818364","https://openalex.org/W4296966548","https://openalex.org/W6983230758","https://openalex.org/W3034855607","https://openalex.org/W2522649981","https://openalex.org/W3192639106","https://openalex.org/W7165772690"],"abstract_inverted_index":{"Bacteria":[0],"in":[1,23,70,99,114],"groups":[2],"vary":[3],"individually,":[4],"and":[5,10,27,38,53,84,117,138,146],"interact":[6],"with":[7,56,136],"other":[8],"bacteria":[9],"the":[11,31,128],"environment":[12],"to":[13,144],"produce":[14],"population-level":[15],"patterns":[16],"of":[17,63,96,133,140],"gene":[18,51,97],"expression.":[19],"Investigating":[20],"such":[21],"behavior":[22],"detail":[24],"requires":[25],"measuring":[26],"controlling":[28],"populations":[29],"at":[30],"single-cell":[32],"level":[33],"alongside":[34],"precisely":[35],"specified":[36],"interactions":[37],"environmental":[39],"characteristics.":[40],"Here":[41],"we":[42],"present":[43],"an":[44],"automated,":[45],"programmable":[46],"platform":[47,77],"that":[48,81],"combines":[49],"image-based":[50],"expression":[52,59,98],"growth":[54],"measurements":[55],"on-line":[57],"optogenetic":[58],"control":[60,95,106,139],"for":[61,130],"hundreds":[62],"individual":[64,83,101,123,142],"Escherichia":[65],"coli":[66],"cells":[67,143],"over":[68],"days,":[69],"a":[71],"dynamically":[72],"adjustable":[73],"environment.":[74],"This":[75],"integrated":[76],"broadly":[78],"enables":[79],"experiments":[80],"bridge":[82],"population":[85,90,149],"behaviors.":[86],"We":[87],"demonstrate:":[88],"(i)":[89],"structuring":[91],"by":[92],"independent":[93],"closed-loop":[94],"many":[100,141],"cells,":[102,116],"(ii)":[103],"cell-cell":[104],"variation":[105],"during":[107],"antibiotic":[108],"perturbation,":[109],"(iii)":[110],"hybrid":[111],"bio-digital":[112],"circuits":[113],"single":[115],"freely":[118],"specifiable":[119],"digital":[120],"communication":[121],"between":[122],"bacteria.":[124],"These":[125],"examples":[126],"showcase":[127],"potential":[129],"real-time":[131],"integration":[132],"theoretical":[134],"models":[135],"measurement":[137],"investigate":[145],"engineer":[147],"microbial":[148],"behavior.":[150]},"counts_by_year":[{"year":2026,"cited_by_count":9},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":22},{"year":2021,"cited_by_count":14},{"year":2020,"cited_by_count":19},{"year":2019,"cited_by_count":15},{"year":2018,"cited_by_count":7}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2017-11-17T00:00:00"}
