{"id":"https://openalex.org/W2751471683","doi":null,"title":"Regulation of ARF16-2 by microRNA160 During Soybean Root Nodule Development","display_name":"Regulation of ARF16-2 by microRNA160 During Soybean Root Nodule Development","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2751471683","mag":"2751471683"},"language":"en","primary_location":{"id":"pmh:oai:openprairie.sdstate.edu:etd-2870","doi":null,"is_oa":true,"landing_page_url":"https://openprairie.sdstate.edu/etd/1736","pdf_url":"https://openprairie.sdstate.edu/etd/1736","source":{"id":"https://openalex.org/S4377196457","display_name":"Open PRAIRIE (South Dakota State University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I177156846","host_organization_name":"South Dakota State University","host_organization_lineage":["https://openalex.org/I177156846"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Electronic Theses and Dissertations","raw_type":"text"},"volume":null,"type":"article","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://openprairie.sdstate.edu/etd/1736","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085156093","display_name":"Spencer Schreier","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Spencer Schreier","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5085156093"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11470","display_name":"Legume Nitrogen Fixing Symbiosis","score":0.9028000235557556,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11470","display_name":"Legume Nitrogen Fixing Symbiosis","score":0.9028000235557556,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.09459999948740005,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12475","display_name":"Plant Parasitism and Resistance","score":0.000699999975040555,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/soybean-root-nodules","display_name":"soybean root nodules","score":0.8820000290870667},{"id":"https://openalex.org/keywords/root-nodule-formation","display_name":"root nodule formation","score":0.8500000238418579},{"id":"https://openalex.org/keywords/auxin-response-factor","display_name":"auxin response factor","score":0.8429999947547913},{"id":"https://openalex.org/keywords/auxin-sensitivity","display_name":"auxin sensitivity","score":0.6890000104904175},{"id":"https://openalex.org/keywords/nitrogen-fixation","display_name":"nitrogen fixation","score":0.625},{"id":"https://openalex.org/keywords/transcriptional-regulation","display_name":"transcriptional regulation","score":0.6869999766349792},{"id":"https://openalex.org/keywords/protein-dna-interactions","display_name":"protein-DNA interactions","score":0.875},{"id":"https://openalex.org/keywords/heterodimerization","display_name":"heterodimerization","score":0.7680000066757202},{"id":"https://openalex.org/keywords/post-transcriptional-regulation","display_name":"post-transcriptional regulation","score":0.8029999732971191},{"id":"https://openalex.org/keywords/lateral-root-primordium","display_name":"lateral root primordium","score":0.652999997138977}],"concepts":[{"id":"https://openalex.org/C2776731575","wikidata":"https://www.wikidata.org/wiki/Q2916245","display_name":"Nodule (geology)","level":2,"score":0.5459384918212891},{"id":"https://openalex.org/C171078966","wikidata":"https://www.wikidata.org/wiki/Q111029","display_name":"Root (linguistics)","level":2,"score":0.4906436502933502},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.302362322807312},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.21994131803512573},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.16880035400390625},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.09582674503326416}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:openprairie.sdstate.edu:etd-2870","doi":null,"is_oa":true,"landing_page_url":"https://openprairie.sdstate.edu/etd/1736","pdf_url":"https://openprairie.sdstate.edu/etd/1736","source":{"id":"https://openalex.org/S4377196457","display_name":"Open PRAIRIE (South Dakota State University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I177156846","host_organization_name":"South Dakota State University","host_organization_lineage":["https://openalex.org/I177156846"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Electronic Theses and Dissertations","raw_type":"text"},{"id":"mag:2751471683","doi":null,"is_oa":false,"landing_page_url":"https://openprairie.sdstate.edu/cgi/viewcontent.cgi?article=2870&context=etd","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"pmh:oai:openprairie.sdstate.edu:etd-2870","doi":null,"is_oa":true,"landing_page_url":"https://openprairie.sdstate.edu/etd/1736","pdf_url":"https://openprairie.sdstate.edu/etd/1736","source":{"id":"https://openalex.org/S4377196457","display_name":"Open PRAIRIE (South Dakota State University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I177156846","host_organization_name":"South Dakota State University","host_organization_lineage":["https://openalex.org/I177156846"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Electronic Theses and Dissertations","raw_type":"text"},"sustainable_development_goals":[{"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2","score":0.6875}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2751471683.pdf","grobid_xml":"https://content.openalex.org/works/W2751471683.grobid-xml"},"referenced_works_count":51,"referenced_works":["https://openalex.org/W1900359431","https://openalex.org/W1927713886","https://openalex.org/W1967179012","https://openalex.org/W1972633502","https://openalex.org/W1994814273","https://openalex.org/W2004214591","https://openalex.org/W2007255918","https://openalex.org/W2018824767","https://openalex.org/W2031199055","https://openalex.org/W2032634972","https://openalex.org/W2035989432","https://openalex.org/W2042139142","https://openalex.org/W2053025657","https://openalex.org/W2061389896","https://openalex.org/W2062863670","https://openalex.org/W2072017031","https://openalex.org/W2073311353","https://openalex.org/W2073730073","https://openalex.org/W2077404754","https://openalex.org/W2078369877","https://openalex.org/W2084189977","https://openalex.org/W2086654822","https://openalex.org/W2090769787","https://openalex.org/W2091622541","https://openalex.org/W2092321617","https://openalex.org/W2099021728","https://openalex.org/W2107576033","https://openalex.org/W2109354542","https://openalex.org/W2109446031","https://openalex.org/W2117287206","https://openalex.org/W2124774553","https://openalex.org/W2136767988","https://openalex.org/W2137652453","https://openalex.org/W2140733984","https://openalex.org/W2140899738","https://openalex.org/W2144036506","https://openalex.org/W2144526182","https://openalex.org/W2148387676","https://openalex.org/W2150076499","https://openalex.org/W2150477724","https://openalex.org/W2154743430","https://openalex.org/W2158957969","https://openalex.org/W2160648204","https://openalex.org/W2162808103","https://openalex.org/W2168871861","https://openalex.org/W2170657163","https://openalex.org/W2214037330","https://openalex.org/W2329878148","https://openalex.org/W2401562190","https://openalex.org/W2555572024","https://openalex.org/W4252255850"],"related_works":["https://openalex.org/W2140798588","https://openalex.org/W2136196762","https://openalex.org/W2045381135","https://openalex.org/W3108114056","https://openalex.org/W2006155982","https://openalex.org/W2940373641","https://openalex.org/W2168178601","https://openalex.org/W2392719499","https://openalex.org/W2017492927","https://openalex.org/W2085411815"],"abstract_inverted_index":{"Soybean":[0],"is":[1,86,161,191,303],"an":[2,44],"excellent":[3],"candidate":[4],"for":[5,32,63,343],"sustainable":[6,36],"agriculture":[7,37],"due":[8],"to":[9,19,39,47,73,123,231,239,264,270,276,290,309,346],"its":[10,316],"production":[11],"of":[12,79,113,135,140,199,212,222,293,301,337,349],"nutritious,":[13],"versatile":[14],"beans":[15],"and":[16,35,49,68,82,132,149,166,177,196,305],"the":[17,70,109,114,129,194,241,247,271,297],"ability":[18,72],"form":[20,285],"symbiotic":[21],"organs":[22],"called":[23],"root":[24,41,55,172,175,197],"nodules":[25,42],"that":[26,159,188,274,282,325],"perform":[27],"nitrogen":[28,52,65],"fixation.":[29],"As":[30],"demand":[31],"both":[33],"yield":[34],"continue":[38],"increase,":[40],"offer":[43],"attractive":[45],"alternative":[46,254],"expensive":[48],"environmentally":[50],"harmful":[51],"fertilizers.":[53],"Understanding":[54],"nodule":[56,80,106,217,228,319],"formation":[57],"may":[58],"open":[59],"genetic":[60],"engineering":[61],"avenues":[62],"optimizing":[64],"fixation":[66],"performance":[67],"transferring":[69],"nodule-formation":[71],"other":[74],"plants.":[75],"A":[76,321],"major":[77],"determinant":[78],"numbers":[81],"quality":[83],"in":[84,142,164,193,215],"soybean":[85,143],"microRNA":[87],"160":[88],"(miR160),":[89],"which":[90],"dictates":[91],"developmental":[92],"stage-specific":[93],"auxin":[94,99],"sensitivity":[95],"by":[96,127,145,225,315],"targeting":[97],"repressor":[98],"response":[100],"factor":[101],"(ARF)":[102],"transcription":[103],"factors":[104],"during":[105,227,318],"development.":[107,320],"However,":[108],"specific":[110],"downstream":[111,312],"targets":[112,126],"miR160-ARF":[115],"signaling":[116],"module":[117],"remain":[118],"unknown.":[119],"This":[120],"project":[121],"seeks":[122],"resolve":[124],"these":[125],"evaluating":[128],"cellular,":[130],"spatiotemporal,":[131],"DNAbinding":[133],"activity":[134,317],"ARF16-2":[136,160,182,235,283,302],"(a":[137],"key":[138,311],"target":[139,294],"miR160":[141,226],"nodules),":[144],"confocal":[146],"microscopy,":[147],"DamID-Seq,":[148],"protein-DNA":[150,322],"interaction":[151],"studies.":[152],"ARF16-2promoter:GUS":[153],"or":[154,184,257],"tdT":[155,185,213],"transcriptional":[156],"fusions":[157,186,208],"revealed":[158],"transcriptionally":[162],"active":[163,192],"dividing":[165],"differentiating":[167],"tissues":[168],"such":[169],"as":[170,250,266,278,335],"primary":[171],"tips,":[173],"lateral":[174],"primordium,":[176],"emerging":[178],"nodules.":[179,201],"In":[180,259],"addition,":[181,260],"promoter:GUS":[183],"show":[187,209],"this":[189,338],"gene":[190],"parenchyma":[195],"stele":[198],"mature":[200,216],"Interestingly,":[202],"ARF16-":[203,261],"2":[204,262],"promoter:16-2":[205],"CDS:tdT":[206],"translational":[207],"a":[210,267,330],"reduction":[211],"signal":[214],"tissues,":[218],"underscoring":[219],"post-transcriptional":[220],"regulation":[221],"ARF16-2,":[223],"likely":[224],"maturation.":[229],"Compared":[230],"known":[232],"activator":[233,251,272,288],"ARFs,":[234,252],"does":[236],"not":[237],"appear":[238,275],"bind":[240],"conserved":[242],"AuxRE":[243],"TGTCTC":[244],"motif":[245],"with":[246,287],"same":[248],"affinity":[249],"suggesting":[253],"binding":[255,299,323],"sites":[256],"functionality.":[258],"appears":[263],"function":[265],"monomer":[268],"compared":[269],"ARFs":[273,289],"act":[277],"dimers.":[279],"We":[280],"hypothesize":[281],"might":[284],"heterodimers":[286],"reduce":[291],"transactivation":[292],"genes.":[295],"When":[296],"genomic":[298],"profile":[300],"identified":[304],"evaluated,":[306],"we":[307],"expect":[308],"identify":[310],"genes":[313],"affected":[314],"assay":[324],"can":[326],"be":[327,341],"performed":[328],"using":[329],"simple":[331],"UV":[332],"trans-illuminator":[333],"developed":[334],"part":[336],"research":[339],"could":[340],"accessible":[342],"teaching":[344],"labs":[345],"demonstrate":[347],"specificity":[348],"bio-molecular":[350],"interactions.":[351]},"counts_by_year":[],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2017-09-15T00:00:00"}