{"id":"https://openalex.org/W2613235306","doi":"https://doi.org/10.1186/s40793-017-0242-6","title":"High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk","display_name":"High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk","publication_year":2017,"publication_date":"2017-05-08","ids":{"openalex":"https://openalex.org/W2613235306","doi":"https://doi.org/10.1186/s40793-017-0242-6","mag":"2613235306","pmid":"https://pubmed.ncbi.nlm.nih.gov/28491240","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/5422911"},"language":"en","primary_location":{"id":"doi:10.1186/s40793-017-0242-6","doi":"https://doi.org/10.1186/s40793-017-0242-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s40793-017-0242-6","pdf_url":"https://environmentalmicrobiome.biomedcentral.com/track/pdf/10.1186/s40793-017-0242-6","source":{"id":"https://openalex.org/S174963459","display_name":"Standards in Genomic Sciences","issn_l":"1944-3277","issn":["1944-3277"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","poland-70"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Standards in Genomic Sciences","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://environmentalmicrobiome.biomedcentral.com/track/pdf/10.1186/s40793-017-0242-6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043285694","display_name":"Sivan Laviad\u2010Shitrit","orcid":"https://orcid.org/0000-0002-0911-3453","observed_orcids":["https://orcid.org/0000-0002-0911-3453"]},"institutions":[{"id":"https://openalex.org/I91203450","display_name":"University of Haifa","ror":"https://ror.org/02f009v59","country_code":"IL","type":"education","lineage":["https://openalex.org/I91203450"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Sivan Laviad-Shitrit","raw_affiliation_strings":["Department of Evolutionary and Environmental Biology, Faculty of Natural Sciences, University of Haifa, Haifa, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Evolutionary and Environmental Biology, Faculty of Natural Sciences, University of Haifa, Haifa, Israel","institution_ids":["https://openalex.org/I91203450"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056895519","display_name":"Markus G\u00f6ker","orcid":"https://orcid.org/0000-0002-5144-6200","observed_orcids":["https://orcid.org/0000-0002-5144-6200"]},"institutions":[{"id":"https://openalex.org/I7935750","display_name":"Leibniz Institute DSMZ \u2013 German Collection of Microorganisms and Cell Cultures","ror":"https://ror.org/02tyer376","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I7935750"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Markus G\u00f6ker","raw_affiliation_strings":["Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany","institution_ids":["https://openalex.org/I7935750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016953798","display_name":"Marcel Huntemann","orcid":"https://orcid.org/0000-0002-1284-3748","observed_orcids":["https://orcid.org/0000-0002-1284-3748"]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marcel Huntemann","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026153785","display_name":"Alicia Clum","orcid":"https://orcid.org/0000-0002-5004-3362","observed_orcids":["https://orcid.org/0000-0002-5004-3362"]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alicia Clum","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091437166","display_name":"Manoj Pillay","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Manoj Pillay","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038974860","display_name":"Krishna Palaniappan","orcid":"https://orcid.org/0000-0003-4484-7505","observed_orcids":["https://orcid.org/0000-0003-4484-7505"]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Krishnaveni Palaniappan","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058400793","display_name":"Neha Jacob Varghese","orcid":"https://orcid.org/0000-0003-0580-0675","observed_orcids":["https://orcid.org/0000-0003-0580-0675"]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Neha Varghese","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003954917","display_name":"Natalia Mikhailova","orcid":"https://orcid.org/0000-0002-9800-2586","observed_orcids":["https://orcid.org/0000-0002-9800-2586"]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Natalia Mikhailova","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011397248","display_name":"Dimitrios Stamatis","orcid":"https://orcid.org/0000-0003-2355-3452","observed_orcids":["https://orcid.org/0000-0003-2355-3452"]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dimitrios Stamatis","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050966078","display_name":"T. B. K. Reddy","orcid":"https://orcid.org/0000-0002-0871-5567","observed_orcids":["https://orcid.org/0000-0002-0871-5567"]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"T. B. K. Reddy","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047824262","display_name":"Chris G. Daum","orcid":"https://orcid.org/0000-0003-3895-5892","observed_orcids":["https://orcid.org/0000-0003-3895-5892"]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chris Daum","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023134115","display_name":"Nicole Shapiro","orcid":"https://orcid.org/0000-0002-5405-7761","observed_orcids":["https://orcid.org/0000-0002-5405-7761"]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nicole Shapiro","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079693902","display_name":"Victor M Markowitz","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Victor Markowitz","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085966412","display_name":"Natalia Ivanova","orcid":"https://orcid.org/0000-0002-5802-9485","observed_orcids":["https://orcid.org/0000-0002-5802-9485"]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Natalia Ivanova","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006298901","display_name":"Tanja Woyke","orcid":"https://orcid.org/0000-0002-9485-5637","observed_orcids":["https://orcid.org/0000-0002-9485-5637"]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tanja Woyke","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000733670","display_name":"Hans\u2010Peter Klenk","orcid":"https://orcid.org/0000-0001-6758-8150","observed_orcids":["https://orcid.org/0000-0001-6758-8150","https://orcid.org/0000-0003-0586-162X"]},"institutions":[{"id":"https://openalex.org/I84884186","display_name":"Newcastle University","ror":"https://ror.org/01kj2bm70","country_code":"GB","type":"education","lineage":["https://openalex.org/I84884186"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Hans-Peter Klenk","raw_affiliation_strings":["School of Biology, Newcastle University, Newcastle upon Tyne, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biology, Newcastle University, Newcastle upon Tyne, UK","institution_ids":["https://openalex.org/I84884186"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023696415","display_name":"Nikos C. Kyrpides","orcid":"https://orcid.org/0000-0002-6131-0462","observed_orcids":["https://orcid.org/0000-0002-6131-0462"]},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nikos C. Kyrpides","raw_affiliation_strings":["Department of Energy Joint Genome Institute, Walnut Creek, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Energy Joint Genome Institute, Walnut Creek, CA, USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059671410","display_name":"Malka Halpern","orcid":"https://orcid.org/0000-0002-3407-2198","observed_orcids":["https://orcid.org/0000-0002-3407-2198"]},"institutions":[{"id":"https://openalex.org/I91203450","display_name":"University of Haifa","ror":"https://ror.org/02f009v59","country_code":"IL","type":"education","lineage":["https://openalex.org/I91203450"]}],"countries":["IL"],"is_corresponding":true,"raw_author_name":"Malka Halpern","raw_affiliation_strings":["Department of Biology and Environment, Faculty of Natural Sciences, University of Haifa, Oranim, Tivon, Israel","Department of Evolutionary and Environmental Biology, Faculty of Natural Sciences, University of Haifa, Haifa, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology and Environment, Faculty of Natural Sciences, University of Haifa, Oranim, Tivon, Israel","institution_ids":["https://openalex.org/I91203450"]},{"raw_affiliation_string":"Department of Evolutionary and Environmental Biology, Faculty of Natural Sciences, University of Haifa, Haifa, Israel","institution_ids":["https://openalex.org/I91203450"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5059671410"],"corresponding_institution_ids":["https://openalex.org/I91203450"],"apc_list":{"value":2145,"currency":"USD","value_usd":2145},"apc_paid":{"value":2145,"currency":"USD","value_usd":2145},"fwci":0.1983,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.46845558,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"12","issue":"1","first_page":"31","last_page":"31"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9692000150680542,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9692000150680542,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12824","display_name":"Infections and bacterial resistance","score":0.00860000029206276,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13849","display_name":"Enterobacteriaceae and Cronobacter Research","score":0.005100000184029341,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/flavobacteriaceae","display_name":"Flavobacteriaceae","score":0.9070000052452087},{"id":"https://openalex.org/keywords/bacteroidetes","display_name":"Bacteroidetes","score":0.9259999990463257},{"id":"https://openalex.org/keywords/draft-genome-sequence","display_name":"draft genome sequence","score":0.8479999899864197},{"id":"https://openalex.org/keywords/genome-annotation","display_name":"genome annotation","score":0.902999997138977},{"id":"https://openalex.org/keywords/raw-cow-milk","display_name":"raw cow milk","score":0.8500000238418579},{"id":"https://openalex.org/keywords/psychrotolerant-bacteria","display_name":"psychrotolerant bacteria","score":0.9670000076293945},{"id":"https://openalex.org/keywords/proteolytic-bacteria","display_name":"proteolytic bacteria","score":0.7710000276565552},{"id":"https://openalex.org/keywords/lipolytic-bacteria","display_name":"lipolytic bacteria","score":0.9980000257492065},{"id":"https://openalex.org/keywords/type-strain","display_name":"type strain","score":0.574999988079071}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8548131585121155},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6773823499679565},{"id":"https://openalex.org/C2775992197","wikidata":"https://www.wikidata.org/wiki/Q513631","display_name":"Raw milk","level":2,"score":0.6091184616088867},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.5740753412246704},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5172786712646484},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5069708824157715},{"id":"https://openalex.org/C18949551","wikidata":"https://www.wikidata.org/wiki/Q740578","display_name":"Sequence assembly","level":5,"score":0.4606807827949524},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.4342724680900574},{"id":"https://openalex.org/C2776335241","wikidata":"https://www.wikidata.org/wiki/Q5458145","display_name":"Flavobacteriaceae","level":5,"score":0.43059366941452026},{"id":"https://openalex.org/C2777385719","wikidata":"https://www.wikidata.org/wiki/Q1061265","display_name":"Bacteroidetes","level":4,"score":0.3882834315299988},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.28412947058677673},{"id":"https://openalex.org/C31903555","wikidata":"https://www.wikidata.org/wiki/Q1637030","display_name":"Food science","level":1,"score":0.12820705771446228},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[],"locations_count":8,"locations":[{"id":"doi:10.1186/s40793-017-0242-6","doi":"https://doi.org/10.1186/s40793-017-0242-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s40793-017-0242-6","pdf_url":"https://environmentalmicrobiome.biomedcentral.com/track/pdf/10.1186/s40793-017-0242-6","source":{"id":"https://openalex.org/S174963459","display_name":"Standards in Genomic Sciences","issn_l":"1944-3277","issn":["1944-3277"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","poland-70"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Standards in Genomic Sciences","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5422911","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5422911","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Stand Genomic Sci","raw_type":"Text"},{"id":"pmid:28491240","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28491240","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Standards in genomic sciences","raw_type":"Case Reports"},{"id":"pmh:oai:escholarship.org:ark:/13030/qt4b48v7v8","doi":null,"is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/4b48v7v8","pdf_url":"https://escholarship.org/content/qt4b48v7v8/qt4b48v7v8.pdf","source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Environmental Microbiome, vol 12, iss 1","raw_type":"article"},{"id":"pmh:oai:osti.gov:1379843","doi":null,"is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1379843","pdf_url":"https://www.osti.gov/servlets/purl/1379843","source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:doaj.org/article:914d600130d34330b8844ee73e06d623","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/914d600130d34330b8844ee73e06d623","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Standards in Genomic Sciences, Vol 12, Iss 1, Pp 1-7 (2017)","raw_type":"article"},{"id":"pmh:oai:escholarship.org/ark:/13030/qt4b48v7v8","doi":null,"is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/4b48v7v8","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Standards in genomic sciences, vol 12, iss 1","raw_type":"article"},{"id":"pmh:qt4b48v7v8","doi":null,"is_oa":false,"landing_page_url":"http://www.escholarship.org/uc/item/4b48v7v8","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Laviad-Shitrit, S; G\u00c3\u00b6ker, M; Huntemann, M; Clum, A; Pillay, M; Palaniappan, K; \u00c2\u00a0et al.(2017). High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482<sup>T</sup>, isolated from raw cow milk. Standards in Genomic Sciences, 12(1). doi: 10.1186/s40793-017-0242-6. Lawrence Berkeley National Laboratory: Lawrence Berkeley National Laboratory. Retrieved from: http://www.escholarship.org/uc/item/4b48v7v8","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s40793-017-0242-6","doi":"https://doi.org/10.1186/s40793-017-0242-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s40793-017-0242-6","pdf_url":"https://environmentalmicrobiome.biomedcentral.com/track/pdf/10.1186/s40793-017-0242-6","source":{"id":"https://openalex.org/S174963459","display_name":"Standards in Genomic Sciences","issn_l":"1944-3277","issn":["1944-3277"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","poland-70"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Standards in Genomic Sciences","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1286236842","display_name":null,"funder_award_id":"-AC02-05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G1772975908","display_name":null,"funder_award_id":"HO 930/5-1","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G3083819904","display_name":null,"funder_award_id":"05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G3685081974","display_name":null,"funder_award_id":"DE-AC02-05CH11231","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G419881185","display_name":null,"funder_award_id":"DEAC02\u201305CH11231","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G42916606","display_name":null,"funder_award_id":"DE AC02 05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G4501827968","display_name":null,"funder_award_id":"AC02-05CH11231","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G498139845","display_name":null,"funder_award_id":"DE-AC02","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G6534364045","display_name":null,"funder_award_id":"GZ: HO 930/5-1","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G6652958823","display_name":null,"funder_award_id":"05CH11231","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G7205239661","display_name":null,"funder_award_id":"AC02-05CH11231","funder_id":"https://openalex.org/F4320316170","funder_display_name":"Joint Genome Institute"},{"id":"https://openalex.org/G834277795","display_name":null,"funder_award_id":"DE\u2013AC02\u201305CH11231","funder_id":"https://openalex.org/F4320316170","funder_display_name":"Joint Genome Institute"},{"id":"https://openalex.org/G969889393","display_name":null,"funder_award_id":"DE-AC02-","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"}],"funders":[{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320316170","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337"},{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320332359","display_name":"Office of Science","ror":"https://ror.org/00mmn6b08"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2613235306.pdf","grobid_xml":"https://content.openalex.org/works/W2613235306.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1968266927","https://openalex.org/W1977730635","https://openalex.org/W1985283768","https://openalex.org/W1991056282","https://openalex.org/W2009000877","https://openalex.org/W2022986961","https://openalex.org/W2025020367","https://openalex.org/W2054418251","https://openalex.org/W2066361251","https://openalex.org/W2076663520","https://openalex.org/W2091922579","https://openalex.org/W2103017472","https://openalex.org/W2116206245","https://openalex.org/W2118374783","https://openalex.org/W2121587014","https://openalex.org/W2132926880","https://openalex.org/W2137516483","https://openalex.org/W2138988050","https://openalex.org/W2139118683","https://openalex.org/W2141052558","https://openalex.org/W2143485490","https://openalex.org/W2147673562","https://openalex.org/W2149429041","https://openalex.org/W2151692850","https://openalex.org/W2151736966","https://openalex.org/W2153798806","https://openalex.org/W2158859864","https://openalex.org/W2160969485","https://openalex.org/W2163920698","https://openalex.org/W2166865790","https://openalex.org/W2169737456","https://openalex.org/W2208035321","https://openalex.org/W2214186913","https://openalex.org/W2518886366","https://openalex.org/W2783007483","https://openalex.org/W3021587187","https://openalex.org/W4205346837","https://openalex.org/W4243977291","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2118374783","https://openalex.org/W7098480088","https://openalex.org/W2076663520","https://openalex.org/W4205505149","https://openalex.org/W2969333439","https://openalex.org/W7204816879","https://openalex.org/W7099350598","https://openalex.org/W2129624624","https://openalex.org/W2016124161","https://openalex.org/W2153798806"],"abstract_inverted_index":{"Abstract":[0],"Chryseobacterium":[1],"bovis":[2,26,97],"DSM":[3],"19482T":[4],"(Hantsis-Zacharov":[5],"et":[6],"al.,":[7],"Int":[8],"J":[9],"Syst":[10],"Evol":[11],"Microbiol":[12],"58:1024-1028,":[13],"2008)":[14],"is":[15,27,79,84,99],"a":[16,28,33],"Gram-negative,":[17],"rod":[18],"shaped,":[19],"non-motile,":[20],"facultative":[21],"anaerobe,":[22],"chemoorganotroph":[23],"bacterium.":[24],"C.":[25,96],"member":[29],"of":[30,62,101,105],"the":[31,36,60,67,102,110],"Flavobacteriaceae,":[32],"family":[34],"within":[35],"phylum":[37],"Bacteroidetes.":[38],"It":[39,87],"was":[40],"isolated":[41],"when":[42],"psychrotolerant":[43],"bacterial":[44],"communities":[45],"in":[46],"raw":[47],"milk":[48],"and":[49,52,71,91],"their":[50],"proteolytic":[51],"lipolytic":[53],"traits":[54],"were":[55],"studied.":[56],"Here":[57],"we":[58],"describe":[59],"features":[61],"this":[63],"organism,":[64],"together":[65],"with":[66],"draft":[68],"genome":[69,98],"sequence":[70],"annotation.":[72],"The":[73,81,95],"DNA":[74],"G":[75],"+":[76],"C":[77],"content":[78],"38.19%.":[80],"chromosome":[82],"length":[83],"3,346,045":[85],"bp.":[86],"encodes":[88],"3236":[89],"proteins":[90],"105":[92],"RNA":[93],"genes.":[94],"part":[100],"Genomic":[103],"Encyclopedia":[104],"Type":[106],"Strains,":[107],"Phase":[108],"I:":[109],"one":[111],"thousand":[112],"microbial":[113],"genomes":[114],"study.":[115]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-11-06T12:05:46.655746","created_date":"2017-05-19T00:00:00"}