{"id":"https://openalex.org/W2610666136","doi":"https://doi.org/10.1101/131052","title":"Encoding and Decoding Dynamic Sensory Signals with Recurrent Neural Networks: An Application of Conceptors to Birdsongs","display_name":"Encoding and Decoding Dynamic Sensory Signals with Recurrent Neural Networks: An Application of Conceptors to Birdsongs","publication_year":2017,"publication_date":"2017-04-28","ids":{"openalex":"https://openalex.org/W2610666136","doi":"https://doi.org/10.1101/131052","mag":"2610666136"},"language":"en","primary_location":{"id":"doi:10.1101/131052","doi":"https://doi.org/10.1101/131052","is_oa":true,"landing_page_url":"https://doi.org/10.1101/131052","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2017/04/28/131052.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"volume":null,"type":"preprint","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.biorxiv.org/content/biorxiv/early/2017/04/28/131052.full.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012329126","display_name":"Richard Gast","orcid":"https://orcid.org/0000-0002-4445-0340","observed_orcids":["https://orcid.org/0000-0002-4445-0340"]},"institutions":[{"id":"https://openalex.org/I170658231","display_name":"Osnabr\u00fcck University","ror":"https://ror.org/04qmmjx98","country_code":"DE","type":"education","lineage":["https://openalex.org/I170658231"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Richard Gast","raw_affiliation_strings":["Institute of Cognitive Science, University of Osnabr\u00fcck, Osnabr\u00fcck, Lower Saxony, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Cognitive Science, University of Osnabr\u00fcck, Osnabr\u00fcck, Lower Saxony, Germany","institution_ids":["https://openalex.org/I170658231"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024883746","display_name":"Patrick Faion","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I170658231","display_name":"Osnabr\u00fcck University","ror":"https://ror.org/04qmmjx98","country_code":"DE","type":"education","lineage":["https://openalex.org/I170658231"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Patrick Faion","raw_affiliation_strings":["Institute of Cognitive Science, University of Osnabr\u00fcck, Osnabr\u00fcck, Lower Saxony, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Cognitive Science, University of Osnabr\u00fcck, Osnabr\u00fcck, Lower Saxony, Germany","institution_ids":["https://openalex.org/I170658231"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019744186","display_name":"Kai Standvoss","orcid":"https://orcid.org/0000-0002-5739-6726","observed_orcids":["https://orcid.org/0000-0002-5739-6726"]},"institutions":[{"id":"https://openalex.org/I170658231","display_name":"Osnabr\u00fcck University","ror":"https://ror.org/04qmmjx98","country_code":"DE","type":"education","lineage":["https://openalex.org/I170658231"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Kai Standvoss","raw_affiliation_strings":["Institute of Cognitive Science, University of Osnabr\u00fcck, Osnabr\u00fcck, Lower Saxony, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Cognitive Science, University of Osnabr\u00fcck, Osnabr\u00fcck, Lower Saxony, Germany","institution_ids":["https://openalex.org/I170658231"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5098384671","display_name":"Andrea Suckro","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I170658231","display_name":"Osnabr\u00fcck University","ror":"https://ror.org/04qmmjx98","country_code":"DE","type":"education","lineage":["https://openalex.org/I170658231"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andrea Suckro","raw_affiliation_strings":["Institute of Cognitive Science, University of Osnabr\u00fcck, Osnabr\u00fcck, Lower Saxony, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Cognitive Science, University of Osnabr\u00fcck, Osnabr\u00fcck, Lower Saxony, Germany","institution_ids":["https://openalex.org/I170658231"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Brian Lewis","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I170658231","display_name":"Osnabr\u00fcck University","ror":"https://ror.org/04qmmjx98","country_code":"DE","type":"education","lineage":["https://openalex.org/I170658231"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Brian Lewis","raw_affiliation_strings":["Institute of Cognitive Science, University of Osnabr\u00fcck, Osnabr\u00fcck, Lower Saxony, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Cognitive Science, University of Osnabr\u00fcck, Osnabr\u00fcck, Lower Saxony, Germany","institution_ids":["https://openalex.org/I170658231"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086183865","display_name":"Gordon Pipa","orcid":"https://orcid.org/0000-0002-3416-2652","observed_orcids":["https://orcid.org/0000-0002-3416-2652"]},"institutions":[{"id":"https://openalex.org/I170658231","display_name":"Osnabr\u00fcck University","ror":"https://ror.org/04qmmjx98","country_code":"DE","type":"education","lineage":["https://openalex.org/I170658231"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Gordon Pipa","raw_affiliation_strings":["Institute of Cognitive Science, University of Osnabr\u00fcck, Osnabr\u00fcck, Lower Saxony, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Cognitive Science, University of Osnabr\u00fcck, Osnabr\u00fcck, Lower Saxony, Germany","institution_ids":["https://openalex.org/I170658231"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I170658231"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":11,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.6039999723434448,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.6039999723434448,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10320","display_name":"Neural Networks and Applications","score":0.17980000376701355,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11665","display_name":"Animal Vocal Communication and Behavior","score":0.13819999992847443,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/recurrent-neural-networks","display_name":"recurrent neural networks","score":0.7870000004768372},{"id":"https://openalex.org/keywords/conceptors","display_name":"conceptors","score":0.8980000019073486},{"id":"https://openalex.org/keywords/bird-song","display_name":"bird song","score":0.7279999852180481},{"id":"https://openalex.org/keywords/syllable-recognition","display_name":"syllable recognition","score":0.6570000052452087},{"id":"https://openalex.org/keywords/neural-population-activity","display_name":"neural population activity","score":0.45399999618530273},{"id":"https://openalex.org/keywords/receptive-fields","display_name":"receptive fields","score":0.9150000214576721}],"concepts":[{"id":"https://openalex.org/C94487597","wikidata":"https://www.wikidata.org/wiki/Q11101","display_name":"Sensory system","level":2,"score":0.8061808347702026},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6550533175468445},{"id":"https://openalex.org/C125411270","wikidata":"https://www.wikidata.org/wiki/Q18653","display_name":"Encoding (memory)","level":2,"score":0.6156727075576782},{"id":"https://openalex.org/C31170391","wikidata":"https://www.wikidata.org/wiki/Q188619","display_name":"Hierarchy","level":2,"score":0.5690155625343323},{"id":"https://openalex.org/C57273362","wikidata":"https://www.wikidata.org/wiki/Q576722","display_name":"Decoding methods","level":2,"score":0.5407755970954895},{"id":"https://openalex.org/C66746571","wikidata":"https://www.wikidata.org/wiki/Q1134833","display_name":"ENCODE","level":3,"score":0.495597243309021},{"id":"https://openalex.org/C40743351","wikidata":"https://www.wikidata.org/wiki/Q7002049","display_name":"Neural decoding","level":3,"score":0.485676646232605},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.4287920594215393},{"id":"https://openalex.org/C2776861996","wikidata":"https://www.wikidata.org/wiki/Q241849","display_name":"Sensory processing","level":3,"score":0.4249926507472992},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4009774923324585},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3267905116081238},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.30785077810287476},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.20258918404579163},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10725539922714233},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.07274043560028076},{"id":"https://openalex.org/C34447519","wikidata":"https://www.wikidata.org/wiki/Q179522","display_name":"Market economy","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1101/131052","doi":"https://doi.org/10.1101/131052","is_oa":true,"landing_page_url":"https://doi.org/10.1101/131052","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2017/04/28/131052.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"}],"best_oa_location":{"id":"doi:10.1101/131052","doi":"https://doi.org/10.1101/131052","is_oa":true,"landing_page_url":"https://doi.org/10.1101/131052","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2017/04/28/131052.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2610666136.pdf","grobid_xml":"https://content.openalex.org/works/W2610666136.grobid-xml"},"referenced_works_count":51,"referenced_works":["https://openalex.org/W79479971","https://openalex.org/W1475870722","https://openalex.org/W1512746852","https://openalex.org/W1595747130","https://openalex.org/W1851970720","https://openalex.org/W1924770834","https://openalex.org/W1964186663","https://openalex.org/W1965248225","https://openalex.org/W1971580074","https://openalex.org/W1974838411","https://openalex.org/W1997822529","https://openalex.org/W2007126717","https://openalex.org/W2010242617","https://openalex.org/W2013160169","https://openalex.org/W2014725748","https://openalex.org/W2016661916","https://openalex.org/W2033094799","https://openalex.org/W2039888808","https://openalex.org/W2052031508","https://openalex.org/W2058947925","https://openalex.org/W2059522186","https://openalex.org/W2067056460","https://openalex.org/W2073546306","https://openalex.org/W2073601096","https://openalex.org/W2076063813","https://openalex.org/W2079150153","https://openalex.org/W2079415701","https://openalex.org/W2080579153","https://openalex.org/W2084516565","https://openalex.org/W2086593994","https://openalex.org/W2100438317","https://openalex.org/W2102224657","https://openalex.org/W2102245440","https://openalex.org/W2112312652","https://openalex.org/W2113211930","https://openalex.org/W2116533103","https://openalex.org/W2121393656","https://openalex.org/W2127135195","https://openalex.org/W2129901640","https://openalex.org/W2131352719","https://openalex.org/W2132003317","https://openalex.org/W2134888862","https://openalex.org/W2158017113","https://openalex.org/W2167488975","https://openalex.org/W2189149359","https://openalex.org/W2295883730","https://openalex.org/W2964121744","https://openalex.org/W4234338746","https://openalex.org/W4234698323","https://openalex.org/W4301900652","https://openalex.org/W6604896550"],"related_works":["https://openalex.org/W2010171068","https://openalex.org/W2105714874","https://openalex.org/W2025027094","https://openalex.org/W2138601186","https://openalex.org/W2112312652","https://openalex.org/W3216194073","https://openalex.org/W2138865186","https://openalex.org/W2587185495","https://openalex.org/W2028232749","https://openalex.org/W2947393444"],"abstract_inverted_index":{"Abstract":[0],"In":[1,92],"a":[2,25,60,67,97,101,149,168,177],"constantly":[3],"changing":[4],"environment":[5],"the":[6,36,43,87,111,126,207,213,220,225,238,244],"brain":[7,239],"has":[8,31],"to":[9,22,32,49,103,131,195,199],"make":[10],"sense":[11],"of":[12,15,39,70,75,89,114,128,156,173,191,209,215,236,246],"dynamic":[13,136],"patterns":[14,19,113],"sensory":[16,40,62,77,107,216],"input.":[17],"These":[18,143],"can":[20,145],"refer":[21],"stimuli":[23,78,108,137],"with":[24,120],"complex":[26],"and":[27,105,133,171,197,228],"hierarchical":[28,81,151],"structure":[29],"which":[30],"be":[33,50,146],"inferred":[34],"from":[35,243],"neural":[37,73,118,249],"activity":[38,112,245],"areas":[41,46],"in":[42,219],"brain.":[44,221],"Such":[45],"were":[47],"found":[48],"locally":[51],"recurrently":[52,116,247],"structured":[53],"as":[54,56,140,154],"well":[55],"hierarchically":[57],"organized":[58],"within":[59],"given":[61],"domain.":[63],"While":[64],"there":[65],"is":[66,84,185],"great":[68],"body":[69],"work":[71],"identifying":[72],"representations":[74],"various":[76],"at":[79],"different":[80,121],"levels,":[82],"less":[83],"known":[85],"about":[86],"nature":[88],"these":[90,174],"representations.":[91],"this":[93,161],"work,":[94],"we":[95,205],"propose":[96],"model":[98,130,159,211],"that":[99,224],"describes":[100],"way":[102],"encode":[104],"decode":[106],"based":[109],"on":[110,167,176,182],"multiple,":[115],"connected":[117,248],"populations":[119],"receptive":[122],"fields.":[123],"We":[124,222],"demonstrate":[125],"ability":[127],"our":[129,210],"learn":[132],"recognize":[134,196],"complex,":[135],"using":[138],"birdsongs":[139,144],"exemplary":[141],"data.":[142],"described":[147],"by":[148,163],"2-level":[150],"structure,":[152],"i.e.":[153],"sequences":[155,172],"syllables.":[157],"Our":[158],"matches":[160],"hierarchy":[162],"learning":[164,202],"single":[165],"syllables":[166,175,192],"first":[169],"level":[170],"top":[178],"level.":[179],"Model":[180],"performance":[181],"recognition":[183],"tasks":[184],"investigated":[186],"for":[187,212],"an":[188],"increasing":[189],"number":[190],"or":[193],"songs":[194],"compared":[198],"state-of-the-art":[200],"machine":[201],"approaches.":[203],"Finally,":[204],"discuss":[206],"implications":[208],"understanding":[214],"pattern":[217],"processing":[218],"conclude":[223],"employed":[226],"encoding":[227],"decoding":[229],"mechanisms":[230],"might":[231],"capture":[232],"general":[233],"computational":[234],"principles":[235],"how":[237],"extracts":[240],"relevant":[241],"information":[242],"populations.":[250]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":7}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2017-05-12T00:00:00"}
