{"id":"https://openalex.org/W2593839367","doi":"https://doi.org/10.1038/srep43583","title":"Specialized activities and expression differences for Clostridium thermocellum biofilm and planktonic cells","display_name":"Specialized activities and expression differences for Clostridium thermocellum biofilm and planktonic cells","publication_year":2017,"publication_date":"2017-02-27","ids":{"openalex":"https://openalex.org/W2593839367","doi":"https://doi.org/10.1038/srep43583","mag":"2593839367","pmid":"https://pubmed.ncbi.nlm.nih.gov/28240279","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/5327387"},"language":"en","primary_location":{"id":"doi:10.1038/srep43583","doi":"https://doi.org/10.1038/srep43583","is_oa":true,"landing_page_url":"https://doi.org/10.1038/srep43583","pdf_url":"https://www.nature.com/articles/srep43583.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.nature.com/articles/srep43583.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051625672","display_name":"Alexandru Dumitrache","orcid":"https://orcid.org/0000-0002-6359-0779","observed_orcids":["https://orcid.org/0000-0002-6359-0779"]},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexandru Dumitrache","raw_affiliation_strings":["BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002003335","display_name":"Dawn M. Klingeman","orcid":"https://orcid.org/0000-0002-4307-2560","observed_orcids":["https://orcid.org/0000-0002-4307-2560"]},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dawn M. Klingeman","raw_affiliation_strings":["BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026379461","display_name":"Jace M. Natzke","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jace Natzke","raw_affiliation_strings":["BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Miguel Rodriguez Jr","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Miguel Rodriguez Jr","raw_affiliation_strings":["BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022944441","display_name":"Richard J. Giannone","orcid":"https://orcid.org/0000-0001-8551-0138","observed_orcids":["https://orcid.org/0000-0001-8551-0138"]},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Richard J. Giannone","raw_affiliation_strings":["BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002596998","display_name":"Robert L. Hettich","orcid":"https://orcid.org/0000-0001-7708-786X","observed_orcids":["https://orcid.org/0000-0001-7708-786X"]},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert L. Hettich","raw_affiliation_strings":["BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077618789","display_name":"Brian H. Davison","orcid":"https://orcid.org/0000-0002-7408-3609","observed_orcids":["https://orcid.org/0000-0002-7408-3609"]},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brian H. Davison","raw_affiliation_strings":["BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A","institution_ids":["https://openalex.org/I1289243028"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019407143","display_name":"Steven D. Brown","orcid":"https://orcid.org/0000-0002-9281-3898","observed_orcids":["https://orcid.org/0000-0002-9281-3898"]},"institutions":[{"id":"https://openalex.org/I1289243028","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56","country_code":"US","type":"facility","lineage":["https://openalex.org/I1289243028","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I4210159294"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Steven D. Brown","raw_affiliation_strings":["BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, U.S.A","institution_ids":["https://openalex.org/I1289243028"]},{"raw_affiliation_string":"BioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, 37831, TN, U.S.A","institution_ids":["https://openalex.org/I1289243028"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5019407143"],"corresponding_institution_ids":["https://openalex.org/I1289243028"],"apc_list":{"value":2690,"currency":"USD","value_usd":2690},"apc_paid":{"value":2690,"currency":"USD","value_usd":2690},"fwci":1.5995,"has_fulltext":true,"cited_by_count":39,"citation_normalized_percentile":{"value":0.80727076,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"7","issue":"1","first_page":"43583","last_page":"43583"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10171","display_name":"Biofuel production and bioconversion","score":0.676800012588501,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10171","display_name":"Biofuel production and bioconversion","score":0.676800012588501,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10593","display_name":"Bacterial biofilms and quorum sensing","score":0.16110000014305115,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11231","display_name":"Microbial Fuel Cells and Bioremediation","score":0.03359999880194664,"subfield":{"id":"https://openalex.org/subfields/2305","display_name":"Environmental Engineering"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/clostridium-thermocellum","display_name":"Clostridium thermocellum","score":1.0},{"id":"https://openalex.org/keywords/biofilm","display_name":"biofilm","score":0.8550000190734863},{"id":"https://openalex.org/keywords/planktonic-cells","display_name":"planktonic cells","score":0.9950000047683716},{"id":"https://openalex.org/keywords/cellulose-degradation","display_name":"cellulose degradation","score":0.6819999814033508},{"id":"https://openalex.org/keywords/lignocellulosic-biomass","display_name":"lignocellulosic biomass","score":0.8510000109672546},{"id":"https://openalex.org/keywords/cell-attachment","display_name":"cell attachment","score":0.5040000081062317},{"id":"https://openalex.org/keywords/bioreactor-design","display_name":"bioreactor design","score":0.7839999794960022},{"id":"https://openalex.org/keywords/cell-division","display_name":"cell division","score":0.421999990940094},{"id":"https://openalex.org/keywords/flagellar-motility","display_name":"flagellar motility","score":0.7480000257492065},{"id":"https://openalex.org/keywords/oxidative-stress-response","display_name":"oxidative stress response","score":0.7549999952316284},{"id":"https://openalex.org/keywords/iron-sulfur-cluster-assembly","display_name":"iron-sulfur cluster assembly","score":0.7630000114440918},{"id":"https://openalex.org/keywords/nucleotide-excision-repair","display_name":"nucleotide excision repair","score":0.8529999852180481},{"id":"https://openalex.org/keywords/trna-thiolation","display_name":"tRNA thiolation","score":0.9020000100135803},{"id":"https://openalex.org/keywords/ethanol-production","display_name":"ethanol production","score":0.49900001287460327}],"concepts":[{"id":"https://openalex.org/C2776061948","wikidata":"https://www.wikidata.org/wiki/Q3681172","display_name":"Clostridium thermocellum","level":4,"score":0.8423553705215454},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.6048502922058105},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.561028778553009},{"id":"https://openalex.org/C141603559","wikidata":"https://www.wikidata.org/wiki/Q410324","display_name":"Cellulase","level":3,"score":0.4895206689834595},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.44146299362182617},{"id":"https://openalex.org/C2779251873","wikidata":"https://www.wikidata.org/wiki/Q80294","display_name":"Cellulose","level":2,"score":0.39694538712501526}],"mesh":[{"descriptor_ui":"D004734","descriptor_name":"Energy Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005285","descriptor_name":"Fermentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010933","descriptor_name":"Plankton","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D010933","descriptor_name":"Plankton","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":true},{"descriptor_ui":"D010933","descriptor_name":"Plankton","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013312","descriptor_name":"Stress, Physiological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015964","descriptor_name":"Gene Expression Regulation, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018384","descriptor_name":"Oxidative Stress","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018441","descriptor_name":"Biofilms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018533","descriptor_name":"Biomass","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D048013","descriptor_name":"Acetivibrio thermocellus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D048013","descriptor_name":"Acetivibrio thermocellus","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":true},{"descriptor_ui":"D048013","descriptor_name":"Acetivibrio thermocellus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D050260","descriptor_name":"Carbohydrate Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D050356","descriptor_name":"Lipid Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053898","descriptor_name":"Biosynthetic Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1038/srep43583","doi":"https://doi.org/10.1038/srep43583","is_oa":true,"landing_page_url":"https://doi.org/10.1038/srep43583","pdf_url":"https://www.nature.com/articles/srep43583.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5327387","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5327387","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sci Rep","raw_type":"Text"},{"id":"pmid:28240279","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28240279","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific reports","raw_type":"Journal Article"},{"id":"pmh:oai:osti.gov:1361314","doi":null,"is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1361314","pdf_url":"https://www.osti.gov/servlets/purl/1361314","source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"doi:10.1038/srep43583","doi":"https://doi.org/10.1038/srep43583","is_oa":true,"landing_page_url":"https://doi.org/10.1038/srep43583","pdf_url":"https://www.nature.com/articles/srep43583.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1026679911","display_name":null,"funder_award_id":"DE-AC05","funder_id":"https://openalex.org/F4320316892","funder_display_name":"UT-Battelle"},{"id":"https://openalex.org/G121915436","display_name":null,"funder_award_id":"DEAC05- 00OR22725","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G1645119126","display_name":null,"funder_award_id":"AC05-00OR22725","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G166562317","display_name":null,"funder_award_id":"DE-AC05- 00OR22725","funder_id":"https://openalex.org/F4320306250","funder_display_name":"Battelle"},{"id":"https://openalex.org/G203625172","display_name":null,"funder_award_id":"DE--AC05--00OR22725","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G2757267231","display_name":null,"funder_award_id":"AC05-00OR22725","funder_id":"https://openalex.org/F4320306250","funder_display_name":"Battelle"},{"id":"https://openalex.org/G2988778103","display_name":null,"funder_award_id":"DE-AC05?","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G3121793570","display_name":null,"funder_award_id":"00OR22725","funder_id":"https://openalex.org/F4320337509","funder_display_name":"Biological and Environmental Research"},{"id":"https://openalex.org/G313676650","display_name":null,"funder_award_id":"DEAC05-00OR22725","funder_id":"https://openalex.org/F4320316892","funder_display_name":"UT-Battelle"},{"id":"https://openalex.org/G4423657506","display_name":null,"funder_award_id":"AC05-00OR22725","funder_id":"https://openalex.org/F4320338287","funder_display_name":"Oak Ridge National Laboratory"},{"id":"https://openalex.org/G450780475","display_name":null,"funder_award_id":"DE\u2010AC05\u201300OR22725","funder_id":"https://openalex.org/F4320337509","funder_display_name":"Biological and Environmental Research"},{"id":"https://openalex.org/G5726405315","display_name":null,"funder_award_id":"DE-AC05","funder_id":"https://openalex.org/F4320306250","funder_display_name":"Battelle"},{"id":"https://openalex.org/G6139676266","display_name":null,"funder_award_id":"Contract DE-AC05-00OR22725","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G675320460","display_name":null,"funder_award_id":"DE-AC05-00OR22725","funder_id":"https://openalex.org/F4320338287","funder_display_name":"Oak Ridge National Laboratory"},{"id":"https://openalex.org/G8269158468","display_name":null,"funder_award_id":"AC05-00OR22725","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G8906985441","display_name":null,"funder_award_id":"00OR22725","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G8943143067","display_name":null,"funder_award_id":"AC05-00OR22725","funder_id":"https://openalex.org/F4320316892","funder_display_name":"UT-Battelle"}],"funders":[{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320306250","display_name":"Battelle","ror":"https://ror.org/01h5tnr73"},{"id":"https://openalex.org/F4320316892","display_name":"UT-Battelle","ror":"https://ror.org/04nza6677"},{"id":"https://openalex.org/F4320332359","display_name":"Office of Science","ror":"https://ror.org/00mmn6b08"},{"id":"https://openalex.org/F4320337509","display_name":"Biological and Environmental Research","ror":"https://ror.org/0114b2m14"},{"id":"https://openalex.org/F4320338287","display_name":"Oak Ridge National Laboratory","ror":"https://ror.org/01qz5mb56"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2593839367.pdf","grobid_xml":"https://content.openalex.org/works/W2593839367.grobid-xml"},"referenced_works_count":63,"referenced_works":["https://openalex.org/W1479682393","https://openalex.org/W1693348576","https://openalex.org/W1964428446","https://openalex.org/W1966022518","https://openalex.org/W1989080603","https://openalex.org/W1991518289","https://openalex.org/W1993729354","https://openalex.org/W2001339596","https://openalex.org/W2009265628","https://openalex.org/W2016480108","https://openalex.org/W2026361863","https://openalex.org/W2042407594","https://openalex.org/W2046494392","https://openalex.org/W2047285451","https://openalex.org/W2053573662","https://openalex.org/W2056463915","https://openalex.org/W2056859258","https://openalex.org/W2064615097","https://openalex.org/W2064987038","https://openalex.org/W2095621771","https://openalex.org/W2096853913","https://openalex.org/W2098627352","https://openalex.org/W2099149842","https://openalex.org/W2103188931","https://openalex.org/W2108086845","https://openalex.org/W2109541010","https://openalex.org/W2109936231","https://openalex.org/W2110256992","https://openalex.org/W2115430241","https://openalex.org/W2117022180","https://openalex.org/W2122027498","https://openalex.org/W2124830355","https://openalex.org/W2128601422","https://openalex.org/W2131923812","https://openalex.org/W2135066331","https://openalex.org/W2143007915","https://openalex.org/W2145576311","https://openalex.org/W2145951580","https://openalex.org/W2146210612","https://openalex.org/W2151208862","https://openalex.org/W2154011311","https://openalex.org/W2155988044","https://openalex.org/W2156328657","https://openalex.org/W2158340748","https://openalex.org/W2158523563","https://openalex.org/W2164393829","https://openalex.org/W2169007793","https://openalex.org/W2170901718","https://openalex.org/W2172226727","https://openalex.org/W2179438025","https://openalex.org/W2179628331","https://openalex.org/W2195150337","https://openalex.org/W2196355788","https://openalex.org/W2202243629","https://openalex.org/W2267068587","https://openalex.org/W2272197616","https://openalex.org/W2462378675","https://openalex.org/W2463195069","https://openalex.org/W2466118811","https://openalex.org/W2480010979","https://openalex.org/W2490273488","https://openalex.org/W4210960692","https://openalex.org/W4230770774"],"related_works":["https://openalex.org/W2757901365","https://openalex.org/W2064615097","https://openalex.org/W7100688495","https://openalex.org/W2137539310","https://openalex.org/W2123623505","https://openalex.org/W2026361863","https://openalex.org/W2155988044","https://openalex.org/W752337560","https://openalex.org/W2179628331","https://openalex.org/W6978011254"],"abstract_inverted_index":{"Clostridium":[0],"(Ruminiclostridium)":[1],"thermocellum":[2],"is":[3],"a":[4,29,44,118],"model":[5],"organism":[6,185],"for":[7,56,92,107,180,190,195],"its":[8],"ability":[9],"to":[10,25,34,48,172],"deconstruct":[11],"plant":[12],"biomass":[13],"and":[14,38,52,74,86,88,110,114,117,132,140,159,186],"convert":[15],"the":[16,82],"cellulose":[17,40,173],"into":[18],"ethanol.":[19],"The":[20],"bacterium":[21],"forms":[22],"biofilms":[23],"adherent":[24],"lignocellulosic":[26],"feedstocks":[27],"in":[28,32,68,142],"continuous":[30],"cell-monolayer":[31],"order":[33],"efficiently":[35],"break":[36],"down":[37],"uptake":[39],"hydrolysates.":[41],"We":[42],"developed":[43],"novel":[45],"bioreactor":[46],"design":[47],"generate":[49],"separate":[50],"sessile":[51],"planktonic":[53],"cell":[54,93,145],"populations":[55,193],"omics":[57],"studies.":[58],"Sessile":[59],"cells":[60,101,192],"had":[61,102],"significantly":[62],"greater":[63],"expression":[64,106,178],"of":[65,70,84,120,152,161,183,197],"genes":[66],"involved":[67],"catabolism":[69],"carbohydrates":[71],"by":[72,79,130,155,164],"glycolysis":[73],"pyruvate":[75],"fermentation,":[76],"ATP":[77],"generation":[78],"proton":[80],"gradient,":[81],"anabolism":[83],"proteins":[85,163],"lipids":[87],"cellular":[89],"functions":[90,182],"critical":[91,181],"division":[94],"consistent":[95],"with":[96],"substrate":[97,174],"replete":[98],"conditions.":[99],"Planktonic":[100],"notably":[103],"higher":[104],"gene":[105,177],"flagellar":[108],"motility":[109],"chemotaxis,":[111],"cellulosomal":[112],"cellulases":[113],"anchoring":[115],"scaffoldins,":[116],"range":[119],"stress":[121,128],"induced":[122],"homeostasis":[123],"mechanisms":[124],"such":[125],"as":[126],"oxidative":[127],"protection":[129],"antioxidants":[131],"flavoprotein":[133],"co-factors,":[134],"methionine":[135],"repair,":[136],"Fe-S":[137],"cluster":[138],"assembly":[139],"repair":[141,158],"redox":[143],"proteins,":[144],"growth":[146],"control":[147],"through":[148],"tRNA":[149],"thiolation,":[150],"recovery":[151],"damaged":[153],"DNA":[154],"nucleotide":[156],"excision":[157],"removal":[160],"terminal":[162],"proteases.":[165],"This":[166],"study":[167],"demonstrates":[168],"that":[169],"microbial":[170],"attachment":[171],"produces":[175],"widespread":[176],"changes":[179],"this":[184],"provides":[187],"physiological":[188],"insights":[189],"two":[191],"relevant":[194],"engineering":[196],"industrially-ready":[198],"phenotypes.":[199]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2017-03-16T00:00:00"}
