{"id":"https://openalex.org/W2542739367","doi":"https://doi.org/10.1371/journal.pone.0164260","title":"The Technical and Biological Reproducibility of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS) Based Typing: Employment of Bioinformatics in a Multicenter Study","display_name":"The Technical and Biological Reproducibility of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS) Based Typing: Employment of Bioinformatics in a Multicenter Study","publication_year":2016,"publication_date":"2016-10-31","ids":{"openalex":"https://openalex.org/W2542739367","doi":"https://doi.org/10.1371/journal.pone.0164260","mag":"2542739367","pmid":"https://pubmed.ncbi.nlm.nih.gov/27798637","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/5087883"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pone.0164260","doi":"https://doi.org/10.1371/journal.pone.0164260","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pone.0164260","pdf_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0164260&type=printable","source":{"id":"https://openalex.org/S202381698","display_name":"PLoS ONE","issn_l":"1932-6203","issn":["1932-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS ONE","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0164260&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019966998","display_name":"Michael Oberle","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210161075","display_name":"Kantonsspital Aarau","ror":"https://ror.org/056tb3809","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I4210161075"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Michael Oberle","raw_affiliation_strings":["Clinical Microbiology, Cantonal Hospital of Aarau, Aarau, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinical Microbiology, Cantonal Hospital of Aarau, Aarau, Switzerland","institution_ids":["https://openalex.org/I4210161075"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042732930","display_name":"Nadia Wohlwend","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210126374","display_name":"Labormedizinische Zentrum Dr Risch (Switzerland)","ror":"https://ror.org/030f5x630","country_code":"CH","type":"company","lineage":["https://openalex.org/I4210126374"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Nadia Wohlwend","raw_affiliation_strings":["Clinical Microbiology, labormedizinisches Zentrum Dr. Risch AG, Berne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinical Microbiology, labormedizinisches Zentrum Dr. Risch AG, Berne, Switzerland","institution_ids":["https://openalex.org/I4210126374"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Daniel Jonas","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I161046081","display_name":"University of Freiburg","ror":"https://ror.org/0245cg223","country_code":"DE","type":"education","lineage":["https://openalex.org/I161046081"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Daniel Jonas","raw_affiliation_strings":["Institute for Environmental Health Medicine and Hospital Infection Control, University of Freiburg, Freiburg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Environmental Health Medicine and Hospital Infection Control, University of Freiburg, Freiburg, Germany","institution_ids":["https://openalex.org/I161046081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019449593","display_name":"Florian P. Maurer","orcid":"https://orcid.org/0000-0001-8353-5964","observed_orcids":["https://orcid.org/0000-0001-8353-5964"]},"institutions":[{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Florian P. Maurer","raw_affiliation_strings":["Institute of Medical Microbiology, University of Zurich, Zurich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Microbiology, University of Zurich, Zurich, Switzerland","institution_ids":["https://openalex.org/I202697423"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006246804","display_name":"G\u00e9raldine Jost","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Geraldine Jost","raw_affiliation_strings":["Clinical Microbiology, Dianalabs, Geneva, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinical Microbiology, Dianalabs, Geneva, Switzerland","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052499187","display_name":"Sarah Tschudin\u2010Sutter","orcid":"https://orcid.org/0000-0003-4875-5368","observed_orcids":["https://orcid.org/0000-0003-4875-5368"]},"institutions":[{"id":"https://openalex.org/I2802542264","display_name":"University Hospital of Basel","ror":"https://ror.org/04k51q396","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I2802542264"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Sarah Tschudin-Sutter","raw_affiliation_strings":["Infectious Diseases and Hospital Epidemiology, University Hospital Basel, Basel, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Infectious Diseases and Hospital Epidemiology, University Hospital Basel, Basel, Switzerland","institution_ids":["https://openalex.org/I2802542264"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063103912","display_name":"Katleen Vranckx","orcid":"https://orcid.org/0000-0002-1980-9809","observed_orcids":["https://orcid.org/0000-0002-1980-9809"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Katleen Vranckx","raw_affiliation_strings":["Applied Maths NV, Sint-Martens-Latem, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Applied Maths NV, Sint-Martens-Latem, Belgium","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053893299","display_name":"Adrian Egli","orcid":"https://orcid.org/0000-0002-3564-8603","observed_orcids":["https://orcid.org/0000-0002-3564-8603"]},"institutions":[{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]},{"id":"https://openalex.org/I2802542264","display_name":"University Hospital of Basel","ror":"https://ror.org/04k51q396","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I2802542264"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Adrian Egli","raw_affiliation_strings":["Applied Microbiology Research, University of Basel, Basel Switzerland","Clinical Microbiology, University Hospital Basel, Basel, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Applied Microbiology Research, University of Basel, Basel Switzerland","institution_ids":["https://openalex.org/I1850255"]},{"raw_affiliation_string":"Clinical Microbiology, University Hospital Basel, Basel, Switzerland","institution_ids":["https://openalex.org/I2802542264"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5053893299"],"corresponding_institution_ids":["https://openalex.org/I1850255","https://openalex.org/I2802542264"],"apc_list":{"value":2382,"currency":"USD","value_usd":2382},"apc_paid":{"value":2382,"currency":"USD","value_usd":2382},"fwci":4.2818,"has_fulltext":true,"cited_by_count":41,"citation_normalized_percentile":{"value":0.93521224,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"11","issue":"10","first_page":"e0164260","last_page":"e0164260"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1308","display_name":"Clinical Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1308","display_name":"Clinical Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.8550000190734863},{"id":"https://openalex.org/keywords/extended-spectrum-beta-lactamase","display_name":"extended-spectrum beta-lactamase","score":0.9779999852180481},{"id":"https://openalex.org/keywords/antimicrobial-resistance","display_name":"antimicrobial resistance","score":0.5799999833106995},{"id":"https://openalex.org/keywords/outbreak-detection","display_name":"outbreak detection","score":0.531000018119812},{"id":"https://openalex.org/keywords/support-vector-machine-classifier","display_name":"support vector classifier","score":0.7160000205039978},{"id":"https://openalex.org/keywords/standard-operating-procedures","display_name":"standard operating procedures","score":0.5230000019073486}],"concepts":[{"id":"https://openalex.org/C9893847","wikidata":"https://www.wikidata.org/wiki/Q1425625","display_name":"Reproducibility","level":2,"score":0.8935161232948303},{"id":"https://openalex.org/C162356407","wikidata":"https://www.wikidata.org/wiki/Q180809","display_name":"Mass spectrometry","level":2,"score":0.6485811471939087},{"id":"https://openalex.org/C69738355","wikidata":"https://www.wikidata.org/wiki/Q1228929","display_name":"Linear discriminant analysis","level":2,"score":0.5036224722862244},{"id":"https://openalex.org/C75280812","wikidata":"https://www.wikidata.org/wiki/Q190382","display_name":"Matrix-assisted laser desorption/ionization","level":4,"score":0.4868006408214569},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.462945818901062},{"id":"https://openalex.org/C164866538","wikidata":"https://www.wikidata.org/wiki/Q367351","display_name":"Cluster (spacecraft)","level":2,"score":0.4609748423099518},{"id":"https://openalex.org/C40325409","wikidata":"https://www.wikidata.org/wiki/Q2360668","display_name":"Mass spectrum","level":3,"score":0.44868341088294983},{"id":"https://openalex.org/C113196181","wikidata":"https://www.wikidata.org/wiki/Q485223","display_name":"Analytical Chemistry (journal)","level":2,"score":0.42433440685272217},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.40145978331565857},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.38381630182266235},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.3389665484428406},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.32367604970932007},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3209308385848999},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2746613323688507},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2306179702281952},{"id":"https://openalex.org/C162711632","wikidata":"https://www.wikidata.org/wiki/Q905514","display_name":"Desorption","level":3,"score":0.08816593885421753},{"id":"https://openalex.org/C150394285","wikidata":"https://www.wikidata.org/wiki/Q180254","display_name":"Adsorption","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001618","descriptor_name":"beta-Lactamases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015373","descriptor_name":"Bacterial Typing Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019032","descriptor_name":"Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019032","descriptor_name":"Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D025341","descriptor_name":"Principal Component Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1371/journal.pone.0164260","doi":"https://doi.org/10.1371/journal.pone.0164260","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pone.0164260","pdf_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0164260&type=printable","source":{"id":"https://openalex.org/S202381698","display_name":"PLoS ONE","issn_l":"1932-6203","issn":["1932-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS ONE","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5087883","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5087883","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS One","raw_type":"Text"},{"id":"pmid:27798637","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27798637","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PloS one","raw_type":"Journal Article"},{"id":"pmh:oai:RePEc:plo:pone00:0164260","doi":null,"is_oa":false,"landing_page_url":"https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0164260","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:doaj.org/article:5d970134989f483197b51138f48bb1a1","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/5d970134989f483197b51138f48bb1a1","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS ONE, Vol 11, Iss 10, p e0164260 (2016)","raw_type":"article"},{"id":"pmh:oai:edoc.unibas.ch:61735","doi":null,"is_oa":false,"landing_page_url":"https://edoc.unibas.ch/61735/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401836","display_name":"edoc (University of Basel)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1850255","host_organization_name":"University of Basel","host_organization_lineage":["https://openalex.org/I1850255"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:figshare.com:article/4167423","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/The_Technical_and_Biological_Reproducibility_of_Matrix-Assisted_Laser_Desorption_Ionization-Time_of_Flight_Mass_Spectrometry_MALDI-TOF_MS_Based_Typing_Employment_of_Bioinformatics_in_a_Multicenter_Study/4167423","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.1371/journal.pone.0164260","doi":"https://doi.org/10.1371/journal.pone.0164260","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pone.0164260","pdf_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0164260&type=printable","source":{"id":"https://openalex.org/S202381698","display_name":"PLoS ONE","issn_l":"1932-6203","issn":["1932-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS ONE","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7246000170707703,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G6068708709","display_name":"Blockade of interferon-? of signalling \u2013 a novel class of adjuvants to improve vaccine-induced antibody responses","funder_award_id":"154709","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"}],"funders":[{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2542739367.pdf","grobid_xml":"https://content.openalex.org/works/W2542739367.grobid-xml"},"referenced_works_count":26,"referenced_works":["https://openalex.org/W138447727","https://openalex.org/W1135377920","https://openalex.org/W1827086298","https://openalex.org/W1830515907","https://openalex.org/W1955612312","https://openalex.org/W1989318282","https://openalex.org/W2015992367","https://openalex.org/W2021521601","https://openalex.org/W2024237409","https://openalex.org/W2025833196","https://openalex.org/W2044408675","https://openalex.org/W2055702869","https://openalex.org/W2065996241","https://openalex.org/W2069135936","https://openalex.org/W2084999955","https://openalex.org/W2090701533","https://openalex.org/W2100542521","https://openalex.org/W2114980859","https://openalex.org/W2136130619","https://openalex.org/W2137683650","https://openalex.org/W2163514057","https://openalex.org/W2166659140","https://openalex.org/W2170770672","https://openalex.org/W2221183855","https://openalex.org/W2292222250","https://openalex.org/W2318071101"],"related_works":["https://openalex.org/W7100318037","https://openalex.org/W1973556160","https://openalex.org/W2036423057","https://openalex.org/W2168086802","https://openalex.org/W1933362869","https://openalex.org/W2231562382","https://openalex.org/W1530320736","https://openalex.org/W3183618869","https://openalex.org/W7202120782","https://openalex.org/W2899716264"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,26,115],"technical,":[2],"biological,":[3],"and":[4,48,61,93,106,112,155,175,217,229,256,267],"inter-center":[5,116],"reproducibility":[6,95,108,117,231],"of":[7,12,28,194,200,232,238],"matrix-assisted":[8],"laser":[9],"desorption":[10],"ionization-time":[11],"flight":[13],"mass":[14],"spectrometry":[15],"(MALDI":[16],"TOF":[17],"MS)":[18],"typing":[19,34],"data":[20,35,85],"has":[21],"not":[22],"yet":[23],"been":[24],"explored.":[25],"aim":[27],"this":[29],"study":[30],"is":[31,241],"to":[32,132,160,164,262],"compare":[33],"from":[36,44,86,243,246],"multiple":[37],"centers":[38,97],"employing":[39],"bioinformatics":[40,258],"using":[41,98],"bacterial":[42],"strains":[43],"two":[45],"past":[46],"outbreaks":[47],"non-related":[49],"strains.":[50],"MATERIAL/METHODS:":[51],"Participants":[52],"received":[53],"twelve":[54],"extended":[55],"spectrum":[56],"betalactamase-producing":[57],"E.":[58],"coli":[59],"isolates":[60],"followed":[62],"the":[63,91,135,147,166,182,192,195,198,201,211,214,218,226,264],"same":[64,136],"standard":[65],"operating":[66],"procedure":[67],"(SOP)":[68],"including":[69],"a":[70,119,129,141,152,157,172,176,207,253,257],"full-protein":[71],"extraction":[72],"protocol.":[73],"All":[74],"laboratories":[75],"provided":[76],"visually":[77],"read":[78],"spectra":[79,244],"via":[80],"flexAnalysis":[81],"(Bruker,":[82],"Germany).":[83],"Raw":[84],"each":[87],"laboratory":[88],"allowed":[89],"calculating":[90],"technical":[92,228],"biological":[94,107,230],"between":[96,110,210],"BioNumerics":[99],"(Applied":[100],"Maths":[101],"NV,":[102],"Belgium).":[103],"RESULTS:":[104],"Technical":[105],"ranged":[109],"96.8-99.4%":[111],"47.6-94.4%,":[113],"respectively.":[114],"showed":[118,189],"comparable":[120],"clustering":[121],"among":[122],"identical":[123],"isolates.":[124],"Principal":[125],"component":[126],"analysis":[127,159,265],"indicated":[128],"higher":[130],"tendency":[131],"cluster":[133,202,216],"within":[134,191],"center.":[137],"Therefore,":[138],"we":[139,150,170,250],"used":[140,171],"discriminant":[142],"analysis,":[143],"which":[144],"completely":[145],"separated":[146],"clusters.":[148,168],"Next,":[149],"defined":[151],"reference":[153,196],"center":[154],"performed":[156],"statistical":[158],"identify":[161,165],"specific":[162,239],"peaks":[163,184],"outbreak":[167],"Finally,":[169],"classifier":[173],"algorithm":[174],"linear":[177],"support":[178],"vector":[179],"machine":[180],"on":[181,225],"determined":[183],"as":[185],"classifier.":[186],"A":[187],"validation":[188],"that":[190,252],"set":[193],"center,":[197],"identification":[199],"was":[203],"100%":[204],"correct":[205,215],"with":[206,213],"large":[208],"contrast":[209],"score":[212],"next":[219],"best":[220],"scoring":[221],"cluster.":[222],"CONCLUSIONS:":[223],"Based":[224],"sufficient":[227],"MALDI-TOF":[233],"MS":[234],"based":[235],"spectra,":[236],"detection":[237],"clusters":[240],"possible":[242],"obtained":[245],"different":[247],"centers.":[248],"However,":[249],"believe":[251],"shared":[254],"SOP":[255],"approach":[259],"are":[260],"required":[261],"make":[263],"robust":[266],"reliable.":[268]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":10},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":3}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2016-11-04T00:00:00"}
