{"id":"https://openalex.org/W2525222162","doi":null,"title":"The eco-genomics of phytoplankton: an outlook on the future","display_name":"The eco-genomics of phytoplankton: an outlook on the future","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W2525222162","mag":"2525222162"},"language":"en","primary_location":{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/406052f1-b246-4440-bf5b-d702c0843561","doi":null,"is_oa":false,"landing_page_url":"https://research.birmingham.ac.uk/en/publications/406052f1-b246-4440-bf5b-d702c0843561","pdf_url":null,"source":{"id":"https://openalex.org/S4306402634","display_name":"University of Birmingham Research Portal (University of Birmingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I79619799","host_organization_name":"University of Birmingham","host_organization_lineage":["https://openalex.org/I79619799"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Amato, A & Orsini, L 2011, The eco-genomics of phytoplankton : An outlook on the future. in Marine Phytoplankton. Nova Science Publishers Inc, pp. 327-344.","raw_type":"bookPart"},"volume":null,"type":"book-chapter","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086207036","display_name":"Alberto Amato","orcid":"https://orcid.org/0000-0002-9126-5535","observed_orcids":["https://orcid.org/0000-0002-9126-5535"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alberto Amato","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-9126-5535","affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5059686572","display_name":"Luisa Orsini","orcid":"https://orcid.org/0000-0002-1716-5624","observed_orcids":["https://orcid.org/0000-0002-1716-5624"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Luisa Orsini","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-1716-5624","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11879","display_name":"Protist diversity and phylogeny","score":0.6987000107765198,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11879","display_name":"Protist diversity and phylogeny","score":0.6987000107765198,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.09709999710321426,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10032","display_name":"Marine Plankton and Biogeochemistry","score":0.05730000138282776,"subfield":{"id":"https://openalex.org/subfields/1910","display_name":"Oceanography"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phytoplankton","display_name":"phytoplankton","score":0.7919999957084656},{"id":"https://openalex.org/keywords/eukaryotic-phytoplankton","display_name":"eukaryotic phytoplankton","score":0.8539999723434448},{"id":"https://openalex.org/keywords/functional-genomics","display_name":"functional genomics","score":0.8320000171661377},{"id":"https://openalex.org/keywords/phytoplankton-diversity","display_name":"phytoplankton diversity","score":0.6759999990463257},{"id":"https://openalex.org/keywords/everything-is-everywhere-hypothesis","display_name":"everything is everywhere hypothesis","score":0.6470000147819519},{"id":"https://openalex.org/keywords/gene-flow","display_name":"gene flow","score":0.7900000214576721},{"id":"https://openalex.org/keywords/bottom-up-control","display_name":"bottom-up control","score":0.8180000185966492},{"id":"https://openalex.org/keywords/extended-phenotype","display_name":"extended phenotype","score":0.8629999756813049},{"id":"https://openalex.org/keywords/mesocosm-studies","display_name":"mesocosm experiment","score":0.7519999742507935},{"id":"https://openalex.org/keywords/bloom-forming-phytoplankton","display_name":"bloom-forming phytoplankton","score":0.8809999823570251},{"id":"https://openalex.org/keywords/toxin-metabolism","display_name":"toxin metabolism","score":0.753000020980835},{"id":"https://openalex.org/keywords/cell-death","display_name":"cell death","score":0.6000000238418579},{"id":"https://openalex.org/keywords/marine-ecosystem-functioning","display_name":"marine ecosystem functioning","score":0.45399999618530273}],"concepts":[{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.641347348690033},{"id":"https://openalex.org/C2780892065","wikidata":"https://www.wikidata.org/wiki/Q184755","display_name":"Phytoplankton","level":3,"score":0.6019768118858337},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.37340086698532104},{"id":"https://openalex.org/C39432304","wikidata":"https://www.wikidata.org/wiki/Q188847","display_name":"Environmental science","level":0,"score":0.36900195479393005},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.3400760293006897},{"id":"https://openalex.org/C505870484","wikidata":"https://www.wikidata.org/wiki/Q180538","display_name":"Fishery","level":1,"score":0.3289305567741394},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.2835608720779419},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.22716164588928223},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.18772059679031372},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1362074315547943},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09600865840911865},{"id":"https://openalex.org/C142796444","wikidata":"https://www.wikidata.org/wiki/Q181394","display_name":"Nutrient","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/406052f1-b246-4440-bf5b-d702c0843561","doi":null,"is_oa":false,"landing_page_url":"https://research.birmingham.ac.uk/en/publications/406052f1-b246-4440-bf5b-d702c0843561","pdf_url":null,"source":{"id":"https://openalex.org/S4306402634","display_name":"University of Birmingham Research Portal (University of Birmingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I79619799","host_organization_name":"University of Birmingham","host_organization_lineage":["https://openalex.org/I79619799"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Amato, A & Orsini, L 2011, The eco-genomics of phytoplankton : An outlook on the future. in Marine Phytoplankton. Nova Science Publishers Inc, pp. 327-344.","raw_type":"bookPart"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/50f73d2b-dd38-410b-8758-d1caf6a0f929","doi":null,"is_oa":false,"landing_page_url":"https://research.birmingham.ac.uk/en/publications/50f73d2b-dd38-410b-8758-d1caf6a0f929","pdf_url":null,"source":{"id":"https://openalex.org/S4306402634","display_name":"University of Birmingham Research Portal (University of Birmingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I79619799","host_organization_name":"University of Birmingham","host_organization_lineage":["https://openalex.org/I79619799"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Amato, A & Orsini, L 2009, The eco-genomics of phytoplankton : An outlook on the future. in Marine Phytoplankton. Nova Science Publishers Inc, pp. 327-343.","raw_type":"bookPart"},{"id":"mag:2525222162","doi":null,"is_oa":false,"landing_page_url":"https://lirias.kuleuven.be/handle/123456789/292458","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":1.0,"id":"https://metadata.un.org/sdg/14","display_name":"Life below water"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":155,"referenced_works":["https://openalex.org/W388573471","https://openalex.org/W1500048837","https://openalex.org/W1506571333","https://openalex.org/W1527401178","https://openalex.org/W1530832870","https://openalex.org/W1533897363","https://openalex.org/W1586285096","https://openalex.org/W1588782085","https://openalex.org/W1604142172","https://openalex.org/W1611803685","https://openalex.org/W1655596520","https://openalex.org/W1671158507","https://openalex.org/W1679993712","https://openalex.org/W1803940008","https://openalex.org/W1926221956","https://openalex.org/W1935435917","https://openalex.org/W1936774573","https://openalex.org/W1953102743","https://openalex.org/W1969055273","https://openalex.org/W1969194646","https://openalex.org/W1971238809","https://openalex.org/W1972848138","https://openalex.org/W1973102751","https://openalex.org/W1976732441","https://openalex.org/W1979456940","https://openalex.org/W1979637090","https://openalex.org/W1983914643","https://openalex.org/W1985721789","https://openalex.org/W1989035209","https://openalex.org/W1990833423","https://openalex.org/W1996208047","https://openalex.org/W1997419850","https://openalex.org/W1998997506","https://openalex.org/W1999830514","https://openalex.org/W2000786883","https://openalex.org/W2005308364","https://openalex.org/W2005316323","https://openalex.org/W2007633637","https://openalex.org/W2011429915","https://openalex.org/W2013332594","https://openalex.org/W2016927947","https://openalex.org/W2018204894","https://openalex.org/W2019700662","https://openalex.org/W2022134547","https://openalex.org/W2025366392","https://openalex.org/W2027459589","https://openalex.org/W2027553174","https://openalex.org/W2027921745","https://openalex.org/W2028971364","https://openalex.org/W2029100467","https://openalex.org/W2034001718","https://openalex.org/W2034645728","https://openalex.org/W2036577945","https://openalex.org/W2036777972","https://openalex.org/W2036815970","https://openalex.org/W2037045595","https://openalex.org/W2037084529","https://openalex.org/W2040080614","https://openalex.org/W2041731317","https://openalex.org/W2042913559","https://openalex.org/W2044151730","https://openalex.org/W2047225262","https://openalex.org/W2048713961","https://openalex.org/W2048795083","https://openalex.org/W2048805913","https://openalex.org/W2049424645","https://openalex.org/W2052912186","https://openalex.org/W2054096803","https://openalex.org/W2054674745","https://openalex.org/W2055498706","https://openalex.org/W2056372653","https://openalex.org/W2057003548","https://openalex.org/W2059433007","https://openalex.org/W2061721807","https://openalex.org/W2062350075","https://openalex.org/W2064609248","https://openalex.org/W2066356526","https://openalex.org/W2070474003","https://openalex.org/W2071626387","https://openalex.org/W2072727078","https://openalex.org/W2077206072","https://openalex.org/W2077571765","https://openalex.org/W2078501578","https://openalex.org/W2079392245","https://openalex.org/W2082215781","https://openalex.org/W2083245751","https://openalex.org/W2087023915","https://openalex.org/W2091371199","https://openalex.org/W2091816721","https://openalex.org/W2092953210","https://openalex.org/W2095419807","https://openalex.org/W2095568636","https://openalex.org/W2096295128","https://openalex.org/W2098660239","https://openalex.org/W2099553504","https://openalex.org/W2102237978","https://openalex.org/W2103184791","https://openalex.org/W2103740336","https://openalex.org/W2104216356","https://openalex.org/W2105613642","https://openalex.org/W2106329638","https://openalex.org/W2108013961","https://openalex.org/W2108849492","https://openalex.org/W2108927741","https://openalex.org/W2112875967","https://openalex.org/W2113452058","https://openalex.org/W2114797031","https://openalex.org/W2115004610","https://openalex.org/W2118166105","https://openalex.org/W2119260195","https://openalex.org/W2119577108","https://openalex.org/W2120159490","https://openalex.org/W2120833001","https://openalex.org/W2121621417","https://openalex.org/W2122698931","https://openalex.org/W2122847517","https://openalex.org/W2123085724","https://openalex.org/W2123298206","https://openalex.org/W2126051943","https://openalex.org/W2128788810","https://openalex.org/W2129163149","https://openalex.org/W2132028145","https://openalex.org/W2132582054","https://openalex.org/W2132919650","https://openalex.org/W2135374784","https://openalex.org/W2136668140","https://openalex.org/W2137227625","https://openalex.org/W2143210178","https://openalex.org/W2145047694","https://openalex.org/W2145573696","https://openalex.org/W2147585044","https://openalex.org/W2148316715","https://openalex.org/W2148857684","https://openalex.org/W2149213980","https://openalex.org/W2150802969","https://openalex.org/W2153069919","https://openalex.org/W2153085302","https://openalex.org/W2153745071","https://openalex.org/W2155025987","https://openalex.org/W2157339489","https://openalex.org/W2157959648","https://openalex.org/W2158214141","https://openalex.org/W2162709121","https://openalex.org/W2164435125","https://openalex.org/W2164713942","https://openalex.org/W2167705142","https://openalex.org/W2322480672","https://openalex.org/W2322946827","https://openalex.org/W2333589139","https://openalex.org/W2334377694","https://openalex.org/W2471442937","https://openalex.org/W2526574910","https://openalex.org/W2897687196","https://openalex.org/W3183999039","https://openalex.org/W4255057798"],"related_works":["https://openalex.org/W2792969633","https://openalex.org/W2131954855","https://openalex.org/W7096499598","https://openalex.org/W2503248049","https://openalex.org/W2328453077","https://openalex.org/W66810076","https://openalex.org/W6906698469","https://openalex.org/W3094892466","https://openalex.org/W2131510658","https://openalex.org/W4400894700"],"abstract_inverted_index":{"The":[0],"community":[1,149,218,324],"structure":[2],"and":[3,18,33,73,102,122,223,325],"functioning":[4,124],"of":[5,23,58,69,76,79,81,139,200,213,238,244,262],"marine":[6,34,48,231,269],"ecosystems":[7,126,232,265,270],"is":[8,127,151,192],"stronglydependent":[9],"on":[10,37,47],"eukaryotic":[11],"phytoplankton,":[12],"which":[13,163],"dominates":[14],"the":[15,56,63,67,74,118,123,132,158,188,214,221,257,274,283],"modern":[16],"oceans":[17],"isresponsible":[19],"for":[20,174,208],"most":[21],"flux":[22],"organic":[24],"matter.":[25],"Most":[26],"importantly,":[27],"higher":[28,305],"trophic":[29,306],"levels":[30,243],"suchas":[31],"fish":[32],"mammals":[35],"depend":[36],"short":[38],"food":[39],"chains":[40],"driven":[41],"by":[42,241,282,286],"bloom-formingphytoplankton.":[43],"Past":[44],"genetic":[45,71,295],"work":[46],"phytoplankton":[49,82,116,201,217,287,294],"has":[50],"mainly":[51],"focused":[52],"ondescriptive":[53],"studies,":[54],"inferring":[55],"extent":[57],"biodiversity":[59,121],"at":[60,148],"or":[61],"below":[62],"species":[64,83],"level.":[65],"Morerecently,":[66],"development":[68],"new":[70,211],"tools":[72],"sequence":[75],"full":[77],"genomes":[78],"ahandful":[80],"allowed":[84],"a":[85,136,175,196,209,236,301],"breakthrough":[86],"in":[87,113,143,247,293],"functional":[88],"genomics":[89],"anddeveloped":[90],"insights":[91],"into":[92],"key":[93],"ecological":[94],"processes,":[95],"such":[96],"as":[97,178,235,271,280],"toxin":[98],"metabolism,":[99],"cell":[100],"mortalityprocesses,":[101],"DMSO":[103],"metabolism.While":[104],"these":[105],"latter":[106],"results":[107],"represent":[108],"an":[109],"encouraging":[110],"step":[111],"forward":[112],"our":[114],"understandingof":[115],"communities,":[117,202],"link":[119],"between":[120,251],"ofpelagic":[125],"still":[128],"missing.":[129],"To":[130],"interpret":[131],"biological":[133],"processes":[134],"drivingbiodiversity,":[135],"mechanistic":[137],"understanding":[138],"single":[140],"gene":[141,249],"effects":[142],"natural":[144,168],"populationsand":[145],"their":[146,181],"feedback":[147],"level":[150],"required.":[152],"This":[153,206,254,308],"can":[154],"be":[155],"achieved":[156],"with":[157],"help":[159],"ofmesocosms":[160],"(controlled":[161],"environments),":[162],"scale":[164],"up":[165],"nicely":[166],"to":[167,268,299,304,322],"environments.Marine":[169],"phytoplanktons":[170],"have":[171,316,323],"been":[172],"considered":[173],"long":[176],"time":[177],"geneticallyhomogeneous":[179],"throughout":[180],"distributional":[182],"range.":[183],"However,":[184],"recent":[185],"evidence":[186],"hasquestioned":[187],"idea":[189],"that":[190,230,256,291,314,318],"everything":[191],"everywhere,":[193],"suggesting":[194],"instead":[195],"spatial":[197,224],"andtemporal":[198],"compartmentalization":[199,225],"despite":[203],"elevated":[204],"geneflow.":[205],"calls":[207],"completely":[210],"view":[212],"'once-thought":[215],"simple'":[216],"dynamics.":[219],"First,":[220],"temporal":[222],"ofphytoplankton":[226],"communities":[227,239],"strongly":[228],"suggests":[229,290],"should":[233],"beconsidered":[234],"group":[237],"connected":[240],"different":[242],"dispersal,":[245],"whichtranslates":[246],"differential":[248],"flow":[250,259],"partially-isolated":[252],"communities.":[253],"wouldsuggest":[255],"dispersal-gene":[258],"paradox":[260],"typical":[261],"standing":[263],"aquatic":[264],"maybe":[266],"applicable":[267],"well.":[272],"Secondly,":[273],"striking":[275],"bottom-up":[276],"effect":[277,303],"inmarine":[278],"ecosystems,":[279],"demonstrated":[281],"control":[284],"operated":[285],"onzooplankton":[288],"demography,":[289],"changes":[292],"diversity":[296],"canbe":[297],"expected":[298],"induce":[300],"chain":[302],"levels.":[307],"concept,":[309],"known":[310],"as'extended":[311],"phenotype',":[312],"predicts":[313],"genes":[315],"phenotypes":[317],"extend":[319],"beyond":[320],"theindividual":[321],"ecosystem":[326],"consequences.":[327]},"counts_by_year":[],"updated_date":"2026-11-11T12:16:26.678958","created_date":"2016-10-07T00:00:00"}