{"id":"https://openalex.org/W2498079865","doi":"https://doi.org/10.1007/s10142-016-0507-y","title":"Comparative transcriptomics of rice plants under cold, iron, and salt stresses","display_name":"Comparative transcriptomics of rice plants under cold, iron, and salt stresses","publication_year":2016,"publication_date":"2016-07-28","ids":{"openalex":"https://openalex.org/W2498079865","doi":"https://doi.org/10.1007/s10142-016-0507-y","mag":"2498079865","pmid":"https://pubmed.ncbi.nlm.nih.gov/27468828"},"language":"en","primary_location":{"id":"doi:10.1007/s10142-016-0507-y","doi":"https://doi.org/10.1007/s10142-016-0507-y","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10142-016-0507-y","pdf_url":null,"source":{"id":"https://openalex.org/S205083708","display_name":"Functional & Integrative Genomics","issn_l":"1438-793X","issn":["1438-793X","1438-7948"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-2"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Functional & Integrative Genomics","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047506772","display_name":"Marcelo Nogueira do Amaral","orcid":"https://orcid.org/0000-0003-3180-7803","observed_orcids":["https://orcid.org/0000-0003-3180-7803"]},"institutions":[{"id":"https://openalex.org/I169248161","display_name":"Universidade Federal de Pelotas","ror":"https://ror.org/05msy9z54","country_code":"BR","type":"education","lineage":["https://openalex.org/I169248161"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Marcelo Nogueira do Amaral","raw_affiliation_strings":["Departament of Botany, Federal University of Pelotas, Pelotas, RS, Brazil. theoamaral@hotmail.com","Departament of Botany, Federal University of Pelotas, Pelotas, RS, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departament of Botany, Federal University of Pelotas, Pelotas, RS, Brazil. theoamaral@hotmail.com","institution_ids":["https://openalex.org/I169248161"]},{"raw_affiliation_string":"Departament of Botany, Federal University of Pelotas, Pelotas, RS, Brazil","institution_ids":["https://openalex.org/I169248161"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084961821","display_name":"Luis Willian Pacheco Arge","orcid":"https://orcid.org/0000-0002-0109-4809","observed_orcids":["https://orcid.org/0000-0002-0109-4809"]},"institutions":[{"id":"https://openalex.org/I169248161","display_name":"Universidade Federal de Pelotas","ror":"https://ror.org/05msy9z54","country_code":"BR","type":"education","lineage":["https://openalex.org/I169248161"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Luis Willian Pacheco Arge","raw_affiliation_strings":["Plant Breeding Center, Federal University of Pelotas, Pelotas, RS, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Plant Breeding Center, Federal University of Pelotas, Pelotas, RS, Brazil","institution_ids":["https://openalex.org/I169248161"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103129424","display_name":"Let\u00edcia Carvalho Benitez","orcid":"https://orcid.org/0000-0002-5900-1193","observed_orcids":["https://orcid.org/0000-0002-5900-1193"]},"institutions":[{"id":"https://openalex.org/I169248161","display_name":"Universidade Federal de Pelotas","ror":"https://ror.org/05msy9z54","country_code":"BR","type":"education","lineage":["https://openalex.org/I169248161"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Let\u00edcia Carvalho Benitez","raw_affiliation_strings":["Departament of Botany, Federal University of Pelotas, Pelotas, RS, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departament of Botany, Federal University of Pelotas, Pelotas, RS, Brazil","institution_ids":["https://openalex.org/I169248161"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015794226","display_name":"Rodrigo Danielowski","orcid":"https://orcid.org/0000-0002-2293-1784","observed_orcids":["https://orcid.org/0000-0002-2293-1784"]},"institutions":[{"id":"https://openalex.org/I169248161","display_name":"Universidade Federal de Pelotas","ror":"https://ror.org/05msy9z54","country_code":"BR","type":"education","lineage":["https://openalex.org/I169248161"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Rodrigo Danielowski","raw_affiliation_strings":["Plant Breeding Center, Federal University of Pelotas, Pelotas, RS, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Plant Breeding Center, Federal University of Pelotas, Pelotas, RS, Brazil","institution_ids":["https://openalex.org/I169248161"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017750707","display_name":"Solange Ferreira da Silveira Silveira","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I169248161","display_name":"Universidade Federal de Pelotas","ror":"https://ror.org/05msy9z54","country_code":"BR","type":"education","lineage":["https://openalex.org/I169248161"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Solange Ferreira da Silveira Silveira","raw_affiliation_strings":["Plant Breeding Center, Federal University of Pelotas, Pelotas, RS, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Plant Breeding Center, Federal University of Pelotas, Pelotas, RS, Brazil","institution_ids":["https://openalex.org/I169248161"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017154515","display_name":"Daniel da Rosa Farias","orcid":"https://orcid.org/0000-0003-4531-0195","observed_orcids":["https://orcid.org/0000-0003-4531-0195"]},"institutions":[{"id":"https://openalex.org/I169248161","display_name":"Universidade Federal de Pelotas","ror":"https://ror.org/05msy9z54","country_code":"BR","type":"education","lineage":["https://openalex.org/I169248161"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Daniel da Rosa Farias","raw_affiliation_strings":["Plant Breeding Center, Federal University of Pelotas, Pelotas, RS, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Plant Breeding Center, Federal University of Pelotas, Pelotas, RS, Brazil","institution_ids":["https://openalex.org/I169248161"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061487739","display_name":"Ant\u00f4nio Costa de Oliveira","orcid":"https://orcid.org/0000-0001-8835-8071","observed_orcids":["https://orcid.org/0000-0001-8835-8071","https://orcid.org/0009-0005-2006-6175"]},"institutions":[{"id":"https://openalex.org/I169248161","display_name":"Universidade Federal de Pelotas","ror":"https://ror.org/05msy9z54","country_code":"BR","type":"education","lineage":["https://openalex.org/I169248161"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Antonio Costa de Oliveira","raw_affiliation_strings":["Plant Breeding Center, Federal University of Pelotas, Pelotas, RS, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Plant Breeding Center, Federal University of Pelotas, Pelotas, RS, Brazil","institution_ids":["https://openalex.org/I169248161"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Luciano Carlos da Maia","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I169248161","display_name":"Universidade Federal de Pelotas","ror":"https://ror.org/05msy9z54","country_code":"BR","type":"education","lineage":["https://openalex.org/I169248161"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Luciano Carlos da Maia","raw_affiliation_strings":["Plant Breeding Center, Federal University of Pelotas, Pelotas, RS, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Plant Breeding Center, Federal University of Pelotas, Pelotas, RS, Brazil","institution_ids":["https://openalex.org/I169248161"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051488499","display_name":"Eug\u00eania Jacira Bolacel Braga","orcid":"https://orcid.org/0000-0001-6364-7934","observed_orcids":["https://orcid.org/0000-0001-6364-7934"]},"institutions":[{"id":"https://openalex.org/I169248161","display_name":"Universidade Federal de Pelotas","ror":"https://ror.org/05msy9z54","country_code":"BR","type":"education","lineage":["https://openalex.org/I169248161"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Eugenia Jacira Bolacel Braga","raw_affiliation_strings":["Departament of Botany, Federal University of Pelotas, Pelotas, RS, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departament of Botany, Federal University of Pelotas, Pelotas, RS, Brazil","institution_ids":["https://openalex.org/I169248161"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5047506772"],"corresponding_institution_ids":["https://openalex.org/I169248161"],"apc_list":{"value":2690,"currency":"USD","value_usd":2690},"apc_paid":null,"fwci":4.6067,"has_fulltext":false,"cited_by_count":60,"citation_normalized_percentile":{"value":0.93845746,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"16","issue":"5","first_page":"567","last_page":"579"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10014","display_name":"Plant Stress Responses and Tolerance","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10014","display_name":"Plant Stress Responses and Tolerance","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12045","display_name":"Rice Cultivation and Yield Improvement","score":0.000699999975040555,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rice","display_name":"rice","score":0.9649999737739563},{"id":"https://openalex.org/keywords/cold-stress","display_name":"cold stress","score":0.925000011920929},{"id":"https://openalex.org/keywords/iron-toxicity","display_name":"iron toxicity","score":0.8650000095367432},{"id":"https://openalex.org/keywords/salt-stress","display_name":"salt stress","score":0.8989999890327454},{"id":"https://openalex.org/keywords/abiotic-stress","display_name":"abiotic stress","score":0.8840000033378601},{"id":"https://openalex.org/keywords/differentially-expressed-genes","display_name":"differentially expressed genes","score":0.9729999899864197},{"id":"https://openalex.org/keywords/transcriptome","display_name":"transcriptome","score":0.6320000290870667},{"id":"https://openalex.org/keywords/photosynthesis","display_name":"photosynthesis","score":0.8309999704360962},{"id":"https://openalex.org/keywords/stress-tolerance","display_name":"stress tolerance","score":0.5789999961853027},{"id":"https://openalex.org/keywords/leaf-transcriptome","display_name":"leaf transcriptome","score":0.4569999873638153}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7851619124412537},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.7080594301223755},{"id":"https://openalex.org/C2778543611","wikidata":"https://www.wikidata.org/wiki/Q161426","display_name":"Oryza sativa","level":3,"score":0.6015485525131226},{"id":"https://openalex.org/C132215390","wikidata":"https://www.wikidata.org/wiki/Q461335","display_name":"Abiotic component","level":2,"score":0.547034502029419},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5375803112983704},{"id":"https://openalex.org/C183688256","wikidata":"https://www.wikidata.org/wiki/Q11982","display_name":"Photosynthesis","level":2,"score":0.521222710609436},{"id":"https://openalex.org/C129513315","wikidata":"https://www.wikidata.org/wiki/Q179615","display_name":"Salinity","level":2,"score":0.5154017210006714},{"id":"https://openalex.org/C89519541","wikidata":"https://www.wikidata.org/wiki/Q4667893","display_name":"Abiotic stress","level":3,"score":0.47903624176979065},{"id":"https://openalex.org/C93829228","wikidata":"https://www.wikidata.org/wiki/Q165963","display_name":"Plastid","level":4,"score":0.46516847610473633},{"id":"https://openalex.org/C69305403","wikidata":"https://www.wikidata.org/wiki/Q47263","display_name":"Chloroplast","level":3,"score":0.4322552978992462},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.4265681505203247},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.332681268453598},{"id":"https://openalex.org/C144027150","wikidata":"https://www.wikidata.org/wiki/Q48803","display_name":"Horticulture","level":1,"score":0.3308737277984619},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.30791175365448},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.1140986979007721}],"mesh":[{"descriptor_ui":"D003080","descriptor_name":"Cold Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007501","descriptor_name":"Iron","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":true},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D012965","descriptor_name":"Sodium Chloride","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D013312","descriptor_name":"Stress, Physiological","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1007/s10142-016-0507-y","doi":"https://doi.org/10.1007/s10142-016-0507-y","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10142-016-0507-y","pdf_url":null,"source":{"id":"https://openalex.org/S205083708","display_name":"Functional & Integrative Genomics","issn_l":"1438-793X","issn":["1438-793X","1438-7948"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-2"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Functional & Integrative Genomics","raw_type":"journal-article"},{"id":"pmid:27468828","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27468828","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Functional & integrative genomics","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","score":0.9208999872207642,"display_name":"Zero hunger"}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321091","display_name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior","ror":"https://ror.org/00x0ma614"},{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":82,"referenced_works":["https://openalex.org/W41146158","https://openalex.org/W574474175","https://openalex.org/W1010141052","https://openalex.org/W1570621366","https://openalex.org/W1577292085","https://openalex.org/W1825784315","https://openalex.org/W1912766591","https://openalex.org/W1965517336","https://openalex.org/W1968330889","https://openalex.org/W1969353942","https://openalex.org/W1977728949","https://openalex.org/W1983796374","https://openalex.org/W1985600167","https://openalex.org/W1986662234","https://openalex.org/W1987302493","https://openalex.org/W1990006026","https://openalex.org/W1993407051","https://openalex.org/W1994066207","https://openalex.org/W1994988919","https://openalex.org/W2002642563","https://openalex.org/W2003235809","https://openalex.org/W2010546094","https://openalex.org/W2023487002","https://openalex.org/W2032693311","https://openalex.org/W2060264343","https://openalex.org/W2060921077","https://openalex.org/W2065169178","https://openalex.org/W2065952478","https://openalex.org/W2071265362","https://openalex.org/W2081194716","https://openalex.org/W2084447570","https://openalex.org/W2087591311","https://openalex.org/W2093801219","https://openalex.org/W2093976158","https://openalex.org/W2094759769","https://openalex.org/W2096311553","https://openalex.org/W2097065948","https://openalex.org/W2104479785","https://openalex.org/W2107277218","https://openalex.org/W2110091268","https://openalex.org/W2110599011","https://openalex.org/W2111646009","https://openalex.org/W2112232018","https://openalex.org/W2113298484","https://openalex.org/W2114104545","https://openalex.org/W2114360920","https://openalex.org/W2117128136","https://openalex.org/W2122239627","https://openalex.org/W2122305785","https://openalex.org/W2122513369","https://openalex.org/W2122915349","https://openalex.org/W2127991402","https://openalex.org/W2128224069","https://openalex.org/W2131271579","https://openalex.org/W2134336144","https://openalex.org/W2134526812","https://openalex.org/W2140243046","https://openalex.org/W2142045253","https://openalex.org/W2144235332","https://openalex.org/W2144313523","https://openalex.org/W2146018911","https://openalex.org/W2147804965","https://openalex.org/W2148571806","https://openalex.org/W2148717014","https://openalex.org/W2152972832","https://openalex.org/W2153318923","https://openalex.org/W2153402731","https://openalex.org/W2159371301","https://openalex.org/W2159699532","https://openalex.org/W2160697532","https://openalex.org/W2161552710","https://openalex.org/W2164154943","https://openalex.org/W2168023061","https://openalex.org/W2169729420","https://openalex.org/W2170394356","https://openalex.org/W2170551349","https://openalex.org/W2171724922","https://openalex.org/W2174733918","https://openalex.org/W2189783345","https://openalex.org/W2283631437","https://openalex.org/W2395167921","https://openalex.org/W2396174061"],"related_works":["https://openalex.org/W2395167921","https://openalex.org/W2563005346","https://openalex.org/W2762977510","https://openalex.org/W1994066207","https://openalex.org/W4362666168","https://openalex.org/W2968536930","https://openalex.org/W4408294827","https://openalex.org/W1979736971","https://openalex.org/W3036714667","https://openalex.org/W2924479594"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":2}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-08-23T00:00:00"}