{"id":"https://openalex.org/W2487296304","doi":null,"title":"In silico analysis of the NBS protein family in Ectocarpus siliculosus","display_name":"In silico analysis of the NBS protein family in Ectocarpus siliculosus","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W2487296304","mag":"2487296304"},"language":"en","primary_location":{"id":"mag:2487296304","doi":null,"is_oa":false,"landing_page_url":"http://nopr.niscair.res.in/bitstream/123456789/16535/1/IJBT%2012%281%29%2098-102.pdf","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},"volume":null,"type":"article","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5014954056","display_name":"Niaz Mahmood","orcid":"https://orcid.org/0000-0003-4018-5516","observed_orcids":["https://orcid.org/0000-0003-4018-5516"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Niaz Mahmood","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-4018-5516","affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5021026285","display_name":"Mahdi Muhammad Moosa","orcid":"https://orcid.org/0000-0002-2823-3178","observed_orcids":["https://orcid.org/0000-0002-2823-3178"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mahdi Muhammad Moosa","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-2823-3178","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10076","display_name":"Plant-Microbe Interactions and Immunity","score":0.4372999966144562,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10076","display_name":"Plant-Microbe Interactions and Immunity","score":0.4372999966144562,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.06870000064373016,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.03290000185370445,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ectocarpus-siliculosus","display_name":"Ectocarpus siliculosus","score":0.9850000143051147},{"id":"https://openalex.org/keywords/brown-algae","display_name":"brown algae","score":0.9900000095367432},{"id":"https://openalex.org/keywords/domain-organization","display_name":"domain organization","score":0.6859999895095825},{"id":"https://openalex.org/keywords/disruptive-selection","display_name":"diversifying selection","score":0.7580000162124634},{"id":"https://openalex.org/keywords/protein-evolution","display_name":"protein evolution","score":0.7369999885559082},{"id":"https://openalex.org/keywords/conserved-motifs","display_name":"conserved motifs","score":0.6299999952316284}],"concepts":[{"id":"https://openalex.org/C522721590","wikidata":"https://www.wikidata.org/wiki/Q184573","display_name":"Brown algae","level":3,"score":0.6562861800193787},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.6289383769035339},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.619703471660614},{"id":"https://openalex.org/C171897839","wikidata":"https://www.wikidata.org/wiki/Q417841","display_name":"Protein family","level":3,"score":0.5048137307167053},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.42279738187789917},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.39912280440330505},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.39012932777404785},{"id":"https://openalex.org/C559758991","wikidata":"https://www.wikidata.org/wiki/Q37868","display_name":"Algae","level":2,"score":0.33935239911079407},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.2180095613002777}],"mesh":[],"locations_count":1,"locations":[{"id":"mag:2487296304","doi":null,"is_oa":false,"landing_page_url":"http://nopr.niscair.res.in/bitstream/123456789/16535/1/IJBT%2012%281%29%2098-102.pdf","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W1592870802","https://openalex.org/W1973328229","https://openalex.org/W1992312974","https://openalex.org/W2024645073","https://openalex.org/W2049631853","https://openalex.org/W2050821290","https://openalex.org/W2050870561","https://openalex.org/W2058795503","https://openalex.org/W2068422180","https://openalex.org/W2071769268","https://openalex.org/W2090995108","https://openalex.org/W2091448229","https://openalex.org/W2097706568","https://openalex.org/W2100420410","https://openalex.org/W2100464143","https://openalex.org/W2125121305","https://openalex.org/W2133126366","https://openalex.org/W2137015675","https://openalex.org/W2140177375","https://openalex.org/W2145091349","https://openalex.org/W2150148265","https://openalex.org/W2164836215","https://openalex.org/W2169123200"],"related_works":["https://openalex.org/W2042544948","https://openalex.org/W4319216506","https://openalex.org/W1989581558","https://openalex.org/W7099880555","https://openalex.org/W7095897759","https://openalex.org/W1990148380","https://openalex.org/W1971900314","https://openalex.org/W7148849945","https://openalex.org/W4404364061","https://openalex.org/W2140177375"],"abstract_inverted_index":{"Nucleotide-binding":[0],"site":[1],"(NBS)":[2],"domain":[3,82],"containing":[4],"proteins":[5,43,57,70,150],"belong":[6],"to":[7,93,136],"one":[8],"of":[9,15,55,66,87,95,109,119,128,139],"the":[10,31,39,48,53,88,107,116,126,140,153],"most":[11],"well":[12],"characterized":[13],"family":[14,90],"proteins;":[16],"they":[17],"are":[18,44,91,100],"found":[19,147],"in":[20,58,164],"almost":[21],"all":[22],"higher":[23],"eukaryotes.":[24],"Extensive":[25],"studies":[26,37],"have":[27,159],"been":[28],"done":[29],"on":[30,38,79],"plant":[32,96],"NBS":[33,42,56,69,141],"proteins,":[34],"but":[35],"similar":[36,92],"brown":[40,60],"algae":[41],"not":[45],"available.":[46],"In":[47],"present":[49],"study,":[50],"authors":[51],"examined":[52],"diversity":[54,146],"model":[59],"algae,":[61],"Ectocarpus":[62],"siliculosus.":[63],"A":[64],"total":[65],"twenty":[67],"six":[68],"were":[71],"identified":[72],"and":[73],"classified":[74],"into":[75],"different":[76],"subfamilies":[77],"based":[78],"their":[80,165],"distinct":[81],"organizations.":[83],"Although":[84],"many":[85],"characteristics":[86],"protein":[89],"those":[94],"species,":[97],"several":[98],"features":[99],"quite":[101],"distinct.":[102],"One":[103],"such":[104],"characteristic":[105],"is":[106,125],"presence":[108,127],"tetratrico":[110],"peptide":[111],"repeat":[112],"(TPR)":[113],"motifs":[114,134],"at":[115],"C-terminal":[117],"ends":[118],"these":[120,149],"proteins.":[121],"Another":[122],"interesting":[123],"finding":[124],"two":[129],"E.":[130],"siliculosus":[131],"specific":[132],"conserved":[133],"leading":[135],"novel":[137],"combination":[138],"domain.":[142],"The":[143],"remarkable":[144],"structural":[145],"among":[148],"further":[151],"strengthens":[152],"idea":[154],"that":[155],"diversifying":[156],"selection":[157],"may":[158],"played":[160],"an":[161],"important":[162],"role":[163],"evolution.":[166]},"counts_by_year":[{"year":2017,"cited_by_count":1}],"updated_date":"2025-11-06T04:12:42.849631","created_date":"2016-08-23T00:00:00"}