{"id":"https://openalex.org/W2466952945","doi":"https://doi.org/10.1080/08927022.2015.1123257","title":"Models for recovering the energy landscape of conformational transitions from single-molecule pulling experiments","display_name":"Models for recovering the energy landscape of conformational transitions from single-molecule pulling experiments","publication_year":2016,"publication_date":"2016-07-05","ids":{"openalex":"https://openalex.org/W2466952945","doi":"https://doi.org/10.1080/08927022.2015.1123257","mag":"2466952945"},"language":"en","primary_location":{"id":"doi:10.1080/08927022.2015.1123257","doi":"https://doi.org/10.1080/08927022.2015.1123257","is_oa":false,"landing_page_url":"https://doi.org/10.1080/08927022.2015.1123257","pdf_url":null,"source":{"id":"https://openalex.org/S45504773","display_name":"Molecular Simulation","issn_l":"0892-7022","issn":["0892-7022","1026-7638","1029-0435"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","jufo-1","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547","https://openalex.org/P4310320449"],"host_organization_lineage_names":["Taylor & Francis","Informa"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Simulation","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084515376","display_name":"Gaurav Arya","orcid":"https://orcid.org/0000-0002-5615-0521","observed_orcids":["https://orcid.org/0000-0002-5615-0521"]},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Gaurav Arya","raw_affiliation_strings":["Department of Nano Engineering, University of California, San Diego, La Jolla, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Nano Engineering, University of California, San Diego, La Jolla, CA, USA","institution_ids":["https://openalex.org/I36258959"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5084515376"],"corresponding_institution_ids":["https://openalex.org/I36258959"],"apc_list":null,"apc_paid":null,"fwci":0.945,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.7452104,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"42","issue":"13","first_page":"1102","last_page":"1115"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10923","display_name":"Force Microscopy Techniques and Applications","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/3107","display_name":"Atomic and Molecular Physics, and Optics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10923","display_name":"Force Microscopy Techniques and Applications","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/3107","display_name":"Atomic and Molecular Physics, and Optics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.011900000274181366,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12044","display_name":"Advanced Physical and Chemical Molecular Interactions","score":0.0032999999821186066,"subfield":{"id":"https://openalex.org/subfields/1606","display_name":"Physical and Theoretical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/energy-landscape","display_name":"energy landscape","score":0.8700000047683716},{"id":"https://openalex.org/keywords/conformational-change","display_name":"conformational change","score":0.9980000257492065},{"id":"https://openalex.org/keywords/single-molecule-force-spectroscopy","display_name":"single-molecule force spectroscopy","score":0.9769999980926514},{"id":"https://openalex.org/keywords/statistical-mechanical-model","display_name":"statistical mechanical model","score":0.8700000047683716},{"id":"https://openalex.org/keywords/force-extension-curves","display_name":"force-extension curves","score":0.4050000011920929},{"id":"https://openalex.org/keywords/molecular-kinetics","display_name":"molecular kinetics","score":0.5},{"id":"https://openalex.org/keywords/intermolecular-interactions","display_name":"intermolecular interactions","score":0.7049999833106995}],"concepts":[{"id":"https://openalex.org/C119621388","wikidata":"https://www.wikidata.org/wiki/Q5377166","display_name":"Energy landscape","level":2,"score":0.8453563451766968},{"id":"https://openalex.org/C119473381","wikidata":"https://www.wikidata.org/wiki/Q49298","display_name":"Force spectroscopy","level":3,"score":0.7831853628158569},{"id":"https://openalex.org/C32909587","wikidata":"https://www.wikidata.org/wiki/Q11369","display_name":"Molecule","level":2,"score":0.6618198156356812},{"id":"https://openalex.org/C166950319","wikidata":"https://www.wikidata.org/wiki/Q245031","display_name":"Intermolecular force","level":3,"score":0.6551164388656616},{"id":"https://openalex.org/C99874945","wikidata":"https://www.wikidata.org/wiki/Q188715","display_name":"Statistical mechanics","level":2,"score":0.550399899482727},{"id":"https://openalex.org/C121864883","wikidata":"https://www.wikidata.org/wiki/Q677916","display_name":"Statistical physics","level":1,"score":0.48574715852737427},{"id":"https://openalex.org/C159467904","wikidata":"https://www.wikidata.org/wiki/Q2001702","display_name":"Chemical physics","level":1,"score":0.43094632029533386},{"id":"https://openalex.org/C2992321928","wikidata":"https://www.wikidata.org/wiki/Q170282","display_name":"Force constant","level":3,"score":0.4283412992954254},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.37995001673698425},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.37643688917160034},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.2948243021965027},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.28981316089630127},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1080/08927022.2015.1123257","doi":"https://doi.org/10.1080/08927022.2015.1123257","is_oa":false,"landing_page_url":"https://doi.org/10.1080/08927022.2015.1123257","pdf_url":null,"source":{"id":"https://openalex.org/S45504773","display_name":"Molecular Simulation","issn_l":"0892-7022","issn":["0892-7022","1026-7638","1029-0435"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","jufo-1","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547","https://openalex.org/P4310320449"],"host_organization_lineage_names":["Taylor & Francis","Informa"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Simulation","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":60,"referenced_works":["https://openalex.org/W1521042556","https://openalex.org/W1967197458","https://openalex.org/W1975353473","https://openalex.org/W1975434461","https://openalex.org/W1975830725","https://openalex.org/W1979863594","https://openalex.org/W1982454916","https://openalex.org/W1983830572","https://openalex.org/W1988715261","https://openalex.org/W1995716926","https://openalex.org/W1996583965","https://openalex.org/W1998445152","https://openalex.org/W2000069816","https://openalex.org/W2001316304","https://openalex.org/W2003240840","https://openalex.org/W2008910783","https://openalex.org/W2014852739","https://openalex.org/W2019877102","https://openalex.org/W2021820673","https://openalex.org/W2025681204","https://openalex.org/W2026221090","https://openalex.org/W2041150841","https://openalex.org/W2046511604","https://openalex.org/W2052192720","https://openalex.org/W2052566891","https://openalex.org/W2057365801","https://openalex.org/W2065907078","https://openalex.org/W2067236515","https://openalex.org/W2068849518","https://openalex.org/W2070074075","https://openalex.org/W2073623394","https://openalex.org/W2085266415","https://openalex.org/W2085756960","https://openalex.org/W2088113438","https://openalex.org/W2089747198","https://openalex.org/W2092144432","https://openalex.org/W2095577295","https://openalex.org/W2099490136","https://openalex.org/W2102375526","https://openalex.org/W2105614327","https://openalex.org/W2125692365","https://openalex.org/W2125996187","https://openalex.org/W2128607364","https://openalex.org/W2137519216","https://openalex.org/W2139770018","https://openalex.org/W2149801992","https://openalex.org/W2151431807","https://openalex.org/W2158208080","https://openalex.org/W2160208648","https://openalex.org/W2160648230","https://openalex.org/W2166035024","https://openalex.org/W2167017056","https://openalex.org/W2304821256","https://openalex.org/W2317051169","https://openalex.org/W2320450269","https://openalex.org/W2898889412","https://openalex.org/W2951980452","https://openalex.org/W3162464574","https://openalex.org/W4234347480","https://openalex.org/W4234689925"],"related_works":["https://openalex.org/W2160208648","https://openalex.org/W2412324865","https://openalex.org/W2278710703","https://openalex.org/W6966812010","https://openalex.org/W2052954614","https://openalex.org/W2046023917","https://openalex.org/W1669096957","https://openalex.org/W3097936963","https://openalex.org/W2170499975","https://openalex.org/W1581032329"],"abstract_inverted_index":{"Single-molecule":[0],"force":[1,44],"spectroscopy":[2],"is":[3],"a":[4,26,30,39,64],"powerful":[5],"experimental":[6],"technique":[7,19],"for":[8,72],"probing":[9],"intermolecular":[10],"forces":[11],"and":[12,52,80],"conformational":[13],"transitions":[14],"of":[15,25,48,55,67],"individual":[16],"molecules.":[17],"This":[18],"involves":[20],"measuring":[21],"the":[22,49,56,77],"mechanical":[23],"response":[24],"molecule":[27],"subjected":[28],"to":[29],"constant":[31],"or":[32],"time-varying":[33],"force.":[34],"Statistical":[35],"mechanics":[36],"has":[37],"played":[38],"pivotal":[40],"role":[41],"in":[42,46,83],"interpreting":[43],"measurements":[45],"terms":[47],"underlying":[50],"kinetics":[51],"energy":[53],"landscape":[54],"molecular":[57],"transition":[58],"being":[59],"studied.":[60],"Here,":[61],"we":[62],"provide":[63],"didactic":[65],"review":[66],"various":[68],"statistical\u2013mechanical":[69],"models":[70],"used":[71,82],"analysing":[73],"these":[74,85],"measurements,":[75],"emphasising":[76],"theoretical":[78],"ideas":[79],"assumptions":[81],"deriving":[84],"models.":[86]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":1}],"updated_date":"2026-10-30T12:39:25.321706","created_date":"2016-07-22T00:00:00"}