{"id":"https://openalex.org/W2399319331","doi":null,"title":"The influence of similarity between concepts in evolving biomedical ontologies for mapping adaptation.","display_name":"The influence of similarity between concepts in evolving biomedical ontologies for mapping adaptation.","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W2399319331","mag":"2399319331","pmid":"https://pubmed.ncbi.nlm.nih.gov/25160339"},"language":"en","primary_location":{"id":"pmid:25160339","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25160339","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":"Comparative Study"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://inria.hal.science/hal-01020913","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081590498","display_name":"J\u00falio Cesar dos Reis","orcid":"https://orcid.org/0000-0002-9545-2098","observed_orcids":["https://orcid.org/0000-0002-9545-2098","https://orcid.org/0000-0001-9543-8715"]},"institutions":[{"id":"https://openalex.org/I4405264519","display_name":"Centre de recherche public Henri-Tudor","ror":"https://ror.org/02689jc25","country_code":"LU","type":"nonprofit","lineage":["https://openalex.org/I4405264519"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Julio Cesar Dos Reis","raw_affiliation_strings":["Public Research Centre Henri Tudor, Luxembourg","Centre de Recherche Public Henri Tudor [Technoport]","Donn\u00e9es et Connaissances Massives et H\u00e9t\u00e9rog\u00e8nes (LRI)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Public Research Centre Henri Tudor, Luxembourg","institution_ids":["https://openalex.org/I4405264519"]},{"raw_affiliation_string":"Centre de Recherche Public Henri Tudor [Technoport]","institution_ids":["https://openalex.org/I4405264519"]},{"raw_affiliation_string":"Donn\u00e9es et Connaissances Massives et H\u00e9t\u00e9rog\u00e8nes (LRI)","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112987596","display_name":"Duy Dinh","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4405264519","display_name":"Centre de recherche public Henri-Tudor","ror":"https://ror.org/02689jc25","country_code":"LU","type":"nonprofit","lineage":["https://openalex.org/I4405264519"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Duy Dinh","raw_affiliation_strings":["Public Research Centre Henri Tudor, Luxembourg","Centre de Recherche Public Henri Tudor [Technoport]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Public Research Centre Henri Tudor, Luxembourg","institution_ids":["https://openalex.org/I4405264519"]},{"raw_affiliation_string":"Centre de Recherche Public Henri Tudor [Technoport]","institution_ids":["https://openalex.org/I4405264519"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014631662","display_name":"C\u00e9dric Pruski","orcid":"https://orcid.org/0000-0002-2103-0431","observed_orcids":["https://orcid.org/0000-0002-2103-0431"]},"institutions":[{"id":"https://openalex.org/I4405264519","display_name":"Centre de recherche public Henri-Tudor","ror":"https://ror.org/02689jc25","country_code":"LU","type":"nonprofit","lineage":["https://openalex.org/I4405264519"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"C\u00e9dric Pruski","raw_affiliation_strings":["Public Research Centre Henri Tudor, Luxembourg","Centre de Recherche Public Henri Tudor [Technoport]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Public Research Centre Henri Tudor, Luxembourg","institution_ids":["https://openalex.org/I4405264519"]},{"raw_affiliation_string":"Centre de Recherche Public Henri Tudor [Technoport]","institution_ids":["https://openalex.org/I4405264519"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000618048","display_name":"Marcos Da Silveira","orcid":"https://orcid.org/0000-0002-2604-3645","observed_orcids":["https://orcid.org/0000-0002-2604-3645"]},"institutions":[{"id":"https://openalex.org/I4405264519","display_name":"Centre de recherche public Henri-Tudor","ror":"https://ror.org/02689jc25","country_code":"LU","type":"nonprofit","lineage":["https://openalex.org/I4405264519"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Marcos Da Silveira","raw_affiliation_strings":["Public Research Centre Henri Tudor, Luxembourg","Centre de Recherche Public Henri Tudor [Technoport]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Public Research Centre Henri Tudor, Luxembourg","institution_ids":["https://openalex.org/I4405264519"]},{"raw_affiliation_string":"Centre de Recherche Public Henri Tudor [Technoport]","institution_ids":["https://openalex.org/I4405264519"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025441331","display_name":"Chantal Reynaud-Dela\u00eetre","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I102197404","display_name":"Universit\u00e9 Paris-Sud","ror":"https://ror.org/028rypz17","country_code":"FR","type":"education","lineage":["https://openalex.org/I102197404","https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4210144804","display_name":"Laboratoire de Recherche en Informatique","ror":"https://ror.org/04e3ktk27","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I277688954","https://openalex.org/I4210144804","https://openalex.org/I4210159245"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Chantal Reynaud-Dela\u00eetre","raw_affiliation_strings":["LRI, University of Paris-Sud XI, France","Donn\u00e9es et Connaissances Massives et H\u00e9t\u00e9rog\u00e8nes (LRI)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LRI, University of Paris-Sud XI, France","institution_ids":["https://openalex.org/I102197404","https://openalex.org/I4210144804"]},{"raw_affiliation_string":"Donn\u00e9es et Connaissances Massives et H\u00e9t\u00e9rog\u00e8nes (LRI)","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.154,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.59086584,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":93},"biblio":{"volume":"205","issue":null,"first_page":"1003","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/2718","display_name":"Health Informatics"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/2718","display_name":"Health Informatics"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.00430000014603138,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T14330","display_name":"Library Science and Information Systems","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biomedical-ontologies","display_name":"biomedical ontologies","score":0.9589999914169312},{"id":"https://openalex.org/keywords/ontology-evolution","display_name":"ontology evolution","score":0.902999997138977},{"id":"https://openalex.org/keywords/ontology-mapping","display_name":"ontology mapping","score":0.628000020980835},{"id":"https://openalex.org/keywords/ontology-versioning","display_name":"ontology versioning","score":0.593999981880188}],"concepts":[{"id":"https://openalex.org/C139807058","wikidata":"https://www.wikidata.org/wiki/Q352374","display_name":"Adaptation (eye)","level":2,"score":0.7879698872566223},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7214394807815552},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.7193834185600281},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7174180746078491},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.7053951621055603},{"id":"https://openalex.org/C28719098","wikidata":"https://www.wikidata.org/wiki/Q44946","display_name":"Point (geometry)","level":2,"score":0.4986443519592285},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.45052438974380493},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3778957724571228},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.23736783862113953},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1007814109325409},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.09896552562713623},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08517211675643921},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.06307810544967651},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014175","descriptor_name":"Translating","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D038801","descriptor_name":"International Classification of Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039061","descriptor_name":"Systematized Nomenclature of Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062527","descriptor_name":"Meaningful Use","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"pmid:25160339","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25160339","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":"Comparative Study"},{"id":"pmh:oai:HAL:hal-01020913v1","doi":null,"is_oa":true,"landing_page_url":"https://inria.hal.science/hal-01020913","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4405252976","host_organization_name":"Centre pour la Communication Scientifique Directe","host_organization_lineage":["https://openalex.org/I4405252976"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"European Medical Informatics Conference (MIE), Aug 2014, Istanbul, Turkey","raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":{"id":"pmh:oai:HAL:hal-01020913v1","doi":null,"is_oa":true,"landing_page_url":"https://inria.hal.science/hal-01020913","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4405252976","host_organization_name":"Centre pour la Communication Scientifique Directe","host_organization_lineage":["https://openalex.org/I4405252976"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"European Medical Informatics Conference (MIE), Aug 2014, Istanbul, Turkey","raw_type":"info:eu-repo/semantics/conferenceObject"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2507905585","https://openalex.org/W2114311629","https://openalex.org/W4387766302","https://openalex.org/W2399299451","https://openalex.org/W2023669837","https://openalex.org/W66241193","https://openalex.org/W4293542688","https://openalex.org/W7097167180","https://openalex.org/W3043268840","https://openalex.org/W7096021661"],"abstract_inverted_index":{"Biomedical":[0],"ontologies":[1],"continuously":[2],"evolve":[3],"which":[4],"demands":[5],"maintain":[6],"associated":[7],"mappings":[8,41],"up-to-date.":[9],"This":[10],"article":[11],"studies":[12],"whether":[13],"similarity":[14],"calculated":[15],"between":[16,43],"values":[17],"of":[18,39,53],"concept":[19],"attributes":[20],"issued":[21],"from":[22],"successive":[23],"ontology":[24],"versions":[25],"plays":[26],"a":[27],"role":[28],"in":[29],"deciding":[30],"mapping":[31,57],"adaptation":[32],"actions.":[33],"We":[34],"empirically":[35],"analyse":[36],"the":[37,51],"evolution":[38],"official":[40],"established":[42],"large":[44],"biomedical":[45],"ontologies.":[46],"The":[47],"results":[48],"point":[49],"out":[50],"relevance":[52],"this":[54],"factor":[55],"for":[56],"adaptation.":[58]},"counts_by_year":[{"year":2015,"cited_by_count":1}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2016-06-24T00:00:00"}
