{"id":"https://openalex.org/W22879745","doi":null,"title":"The Gut Reaction: How the Intestinal Microbiota Respond to Citrobacter rodentium Colonization","display_name":"The Gut Reaction: How the Intestinal Microbiota Respond to Citrobacter rodentium Colonization","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W22879745","mag":"22879745"},"language":"en","primary_location":{"id":"pmh:oai:digitalcommons.liberty.edu:honors-1435","doi":null,"is_oa":true,"landing_page_url":"https://digitalcommons.liberty.edu/honors/421","pdf_url":"https://digitalcommons.liberty.edu/honors/421","source":{"id":"https://openalex.org/S4306400581","display_name":"Digital Commons (Liberty University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67789559","host_organization_name":"Liberty University","host_organization_lineage":["https://openalex.org/I67789559"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Senior Honors Theses","raw_type":"text"},"volume":null,"type":"article","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://digitalcommons.liberty.edu/honors/421","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028829231","display_name":"Cassandra Black","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Cassandra Black","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5028829231"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00097217,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.7544000148773193,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.7544000148773193,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10943","display_name":"Escherichia coli research studies","score":0.2401999980211258,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11288","display_name":"Clostridium difficile and Clostridium perfringens research","score":0.0006000000284984708,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gut-microbiota","display_name":"gut microbiota","score":0.9649999737739563},{"id":"https://openalex.org/keywords/citrobacter-rodentium","display_name":"Citrobacter rodentium","score":0.9890000224113464},{"id":"https://openalex.org/keywords/escherichia-coli-o157-h7","display_name":"Escherichia coli O157:H7","score":0.9409999847412109},{"id":"https://openalex.org/keywords/mouse-model","display_name":"mouse model","score":0.3790000081062317},{"id":"https://openalex.org/keywords/bacterial-colonization","display_name":"bacterial colonization","score":0.6819999814033508},{"id":"https://openalex.org/keywords/streptomycin-resistance","display_name":"streptomycin resistance","score":0.7680000066757202},{"id":"https://openalex.org/keywords/bacteroidales","display_name":"Bacteroidales","score":0.9760000109672546},{"id":"https://openalex.org/keywords/gut-microbiome-dynamics","display_name":"gut microbiome dynamics","score":0.49900001287460327},{"id":"https://openalex.org/keywords/gut-health","display_name":"gut health","score":0.5699999928474426},{"id":"https://openalex.org/keywords/pathogen-colonization","display_name":"pathogen colonization","score":0.5070000290870667}],"concepts":[{"id":"https://openalex.org/C2910319489","wikidata":"https://www.wikidata.org/wiki/Q16975761","display_name":"Citrobacter rodentium","level":3,"score":0.9771491289138794},{"id":"https://openalex.org/C2776927270","wikidata":"https://www.wikidata.org/wiki/Q815962","display_name":"Colonization","level":2,"score":0.7764450311660767},{"id":"https://openalex.org/C2775945818","wikidata":"https://www.wikidata.org/wiki/Q134081","display_name":"Citrobacter","level":5,"score":0.6298848390579224},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.5288575291633606},{"id":"https://openalex.org/C539455810","wikidata":"https://www.wikidata.org/wiki/Q739734","display_name":"Gut flora","level":2,"score":0.4914153814315796},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.47619593143463135},{"id":"https://openalex.org/C189506811","wikidata":"https://www.wikidata.org/wiki/Q5148442","display_name":"Colonisation resistance","level":3,"score":0.4568290710449219},{"id":"https://openalex.org/C2778910516","wikidata":"https://www.wikidata.org/wiki/Q380136","display_name":"Enterobacteriaceae","level":4,"score":0.2634028494358063},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.1876215934753418},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.1513502597808838},{"id":"https://openalex.org/C2776460866","wikidata":"https://www.wikidata.org/wiki/Q170065","display_name":"Pathogen","level":2,"score":0.1289977729320526},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.07255151867866516},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:digitalcommons.liberty.edu:honors-1435","doi":null,"is_oa":true,"landing_page_url":"https://digitalcommons.liberty.edu/honors/421","pdf_url":"https://digitalcommons.liberty.edu/honors/421","source":{"id":"https://openalex.org/S4306400581","display_name":"Digital Commons (Liberty University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67789559","host_organization_name":"Liberty University","host_organization_lineage":["https://openalex.org/I67789559"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Senior Honors Theses","raw_type":"text"},{"id":"mag:22879745","doi":null,"is_oa":false,"landing_page_url":"https://digitalcommons.liberty.edu/cgi/viewcontent.cgi?article=1435&context=honors","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"pmh:oai:digitalcommons.liberty.edu:honors-1435","doi":null,"is_oa":true,"landing_page_url":"https://digitalcommons.liberty.edu/honors/421","pdf_url":"https://digitalcommons.liberty.edu/honors/421","source":{"id":"https://openalex.org/S4306400581","display_name":"Digital Commons (Liberty University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67789559","host_organization_name":"Liberty University","host_organization_lineage":["https://openalex.org/I67789559"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Senior Honors Theses","raw_type":"text"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.9391000270843506,"id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W22879745.pdf","grobid_xml":"https://content.openalex.org/works/W22879745.grobid-xml"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W1231996581","https://openalex.org/W1489905965","https://openalex.org/W1538537425","https://openalex.org/W1573547148","https://openalex.org/W1899898570","https://openalex.org/W1935102007","https://openalex.org/W1967821667","https://openalex.org/W1993354706","https://openalex.org/W1998792609","https://openalex.org/W2009170813","https://openalex.org/W2009614982","https://openalex.org/W2032347305","https://openalex.org/W2048512273","https://openalex.org/W2056611623","https://openalex.org/W2065231269","https://openalex.org/W2067151270","https://openalex.org/W2073544844","https://openalex.org/W2082464084","https://openalex.org/W2096666146","https://openalex.org/W2103297591","https://openalex.org/W2107530746","https://openalex.org/W2109669785","https://openalex.org/W2110693699","https://openalex.org/W2119874529","https://openalex.org/W2125313483","https://openalex.org/W2128394626","https://openalex.org/W2128743925","https://openalex.org/W2147893409","https://openalex.org/W2150006179","https://openalex.org/W2155286505","https://openalex.org/W2158463067","https://openalex.org/W2169330513","https://openalex.org/W2328644083","https://openalex.org/W2328804149","https://openalex.org/W2409621962","https://openalex.org/W2415086269","https://openalex.org/W2472813141","https://openalex.org/W4213392178"],"related_works":["https://openalex.org/W307281676","https://openalex.org/W2067320696","https://openalex.org/W7136057736","https://openalex.org/W2893805679","https://openalex.org/W2611405455","https://openalex.org/W4385741400","https://openalex.org/W2911499487","https://openalex.org/W84161138","https://openalex.org/W4395006610","https://openalex.org/W2765937717"],"abstract_inverted_index":{"The":[0,14,140,170,194,223],"human":[1,86],"intestine":[2,105,215],"hosts":[3],"a":[4,18,113,143,152,178,237],"diverse":[5],"community":[6],"of":[7,41,51,142,146,181,196,209,234],"bacteria":[8,53],"known":[9,54],"as":[10,55,112,216],"the":[11,22,31,38,47,81,89,93,103,125,130,184,197,207,213,229],"intestinal":[12,15,126,198],"microbiota.":[13],"microbiota":[16,127,199],"have":[17,36],"symbiotic":[19],"relationship":[20],"with":[21,191],"host":[23],"organism.":[24],"Current":[25],"research":[26,111],"does":[27,78],"not":[28,79],"clearly":[29],"define":[30],"effect":[32],"these":[33],"commensal":[34],"microorganisms":[35],"on":[37,236],"overall":[39],"maintenance":[40],"gastrointestinal":[42],"health,":[43],"including":[44],"protection":[45],"from":[46],"invasion":[48],"and":[49,62,106,118,134,155,160,167,231],"pathogenesis":[50],"foreign":[52],"pathogens.":[56],"EHEC":[57,77,116,235],"O157:H7":[58],"causes":[59],"severe":[60],"sickness":[61],"can":[63],"be":[64,203],"life-threatening,":[65],"but":[66],"is":[67,75,107,135,177,189],"difficult":[68],"to":[69,101,202,228],"study":[70,221],"in":[71,109,137,157,183,212],"vivo.":[72],"One":[73],"challenge":[74],"that":[76,175],"colonize":[80,102],"preferred":[82],"animal":[83],"model":[84,114],"for":[85,115,206,219],"GI":[87],"studies:":[88],"murine":[90,94],"intestine.":[91],"However,":[92,120],"pathogen":[95],"Citrobacter":[96],"rodentium":[97,133,148,211],"has":[98,200],"been":[99],"shown":[100],"mouse":[104,162,214],"used":[108],"current":[110],"colonization":[117,131,141,208],"infection.":[119],"no":[121],"one":[122],"knows":[123],"how":[124],"respond":[128],"during":[129],"C.":[132,147,210],"addressed":[136],"this":[138,220],"thesis.":[139],"streptomycin-resistant":[144],"strain":[145],"was":[149],"observed":[150],"over":[151],"15-day":[153],"period":[154],"quantified":[156],"both":[158],"conventional":[159],"streptomycin-treated":[161,186],"models":[163],"using":[164],"genus-specific":[165],"primers":[166],"quantitative":[168],"PCR.":[169],"day":[171],"7":[172],"results":[173],"indicate":[174],"there":[176],"significant":[179],"increase":[180],"Bacteroidales":[182],"uncolonized,":[185],"model,":[187],"which":[188],"consistent":[190],"previous":[192],"studies.":[193],"characterization":[195],"yet":[201],"fully":[204],"described":[205],"data":[217],"analysis":[218],"continues.":[222],"anticipated":[224],"outcomes":[225],"may":[226],"lead":[227],"prevention":[230],"clinical":[232],"care":[233],"global":[238],"scale.":[239]},"counts_by_year":[],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
