{"id":"https://openalex.org/W2282010896","doi":null,"title":"Transcriptomics of Iron Limitation in Phaeocystis antarctica","display_name":"Transcriptomics of Iron Limitation in Phaeocystis antarctica","publication_year":2014,"publication_date":"2014-06-08","ids":{"openalex":"https://openalex.org/W2282010896","mag":"2282010896"},"language":"en","primary_location":{"id":"pmh:oai:epic.awi.de:35933","doi":null,"is_oa":true,"landing_page_url":"https://epic.awi.de/id/eprint/35933/1/Mariam_MScThesis_20140601.pdf","pdf_url":"https://epic.awi.de/id/eprint/35933/1/Mariam_MScThesis_20140601.pdf","source":{"id":"https://openalex.org/S4306400378","display_name":"Helmholtz-Zentrum f\u00fcr Polar-und Meeresforschung (Alfred-Wegener-Institut)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2799732068","host_organization_name":"Royal Prince Alfred Hospital","host_organization_lineage":["https://openalex.org/I2799732068"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Thesis"},"volume":null,"type":"dissertation","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://epic.awi.de/id/eprint/35933/1/Mariam_MScThesis_20140601.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042746629","display_name":"Mariam R. Rizkallah","orcid":"https://orcid.org/0000-0001-7341-0447","observed_orcids":["https://orcid.org/0000-0001-7341-0447"]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Mariam Reyad Rizkallah Issak","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5042746629"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10032","display_name":"Marine Plankton and Biogeochemistry","score":0.8695999979972839,"subfield":{"id":"https://openalex.org/subfields/1910","display_name":"Oceanography"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10032","display_name":"Marine Plankton and Biogeochemistry","score":0.8695999979972839,"subfield":{"id":"https://openalex.org/subfields/1910","display_name":"Oceanography"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11418","display_name":"Plant Micronutrient Interactions and Effects","score":0.026799999177455902,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10452","display_name":"Iron Metabolism and Disorders","score":0.013100000098347664,"subfield":{"id":"https://openalex.org/subfields/2720","display_name":"Hematology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phaeocystis-antarctica","display_name":"Phaeocystis antarctica","score":0.9990000128746033},{"id":"https://openalex.org/keywords/iron-limitation","display_name":"iron limitation","score":0.9929999709129333},{"id":"https://openalex.org/keywords/iron-fertilization","display_name":"iron fertilization","score":0.8230000138282776},{"id":"https://openalex.org/keywords/transcriptome","display_name":"transcriptome","score":0.7070000171661377},{"id":"https://openalex.org/keywords/differential-gene-expression","display_name":"differential gene expression","score":0.8069999814033508},{"id":"https://openalex.org/keywords/phytoplankton-adaptation","display_name":"phytoplankton adaptation","score":0.7229999899864197},{"id":"https://openalex.org/keywords/southern-ocean","display_name":"Southern Ocean","score":0.6050000190734863},{"id":"https://openalex.org/keywords/ross-sea","display_name":"Ross Sea","score":0.7310000061988831},{"id":"https://openalex.org/keywords/photosystem-ii","display_name":"photosystem II","score":0.5479999780654907},{"id":"https://openalex.org/keywords/reactive-oxygen-species-defense","display_name":"reactive oxygen species defense","score":0.9890000224113464},{"id":"https://openalex.org/keywords/phytoplankton-blooms","display_name":"phytoplankton blooms","score":0.6259999871253967},{"id":"https://openalex.org/keywords/sulfur-emissions","display_name":"sulfur emissions","score":0.5789999961853027},{"id":"https://openalex.org/keywords/carbon-cycle","display_name":"carbon cycle","score":0.6700000166893005}],"concepts":[{"id":"https://openalex.org/C2780892065","wikidata":"https://www.wikidata.org/wiki/Q184755","display_name":"Phytoplankton","level":3,"score":0.7961217761039734},{"id":"https://openalex.org/C182626311","wikidata":"https://www.wikidata.org/wiki/Q1312789","display_name":"Iron fertilization","level":4,"score":0.7523459196090698},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.6086644530296326},{"id":"https://openalex.org/C183688256","wikidata":"https://www.wikidata.org/wiki/Q11982","display_name":"Photosynthesis","level":2,"score":0.5135815143585205},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4951240122318268},{"id":"https://openalex.org/C155567681","wikidata":"https://www.wikidata.org/wiki/Q2987425","display_name":"Bloom","level":2,"score":0.4512171745300293},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.3669529855251312},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.31952810287475586},{"id":"https://openalex.org/C142796444","wikidata":"https://www.wikidata.org/wiki/Q181394","display_name":"Nutrient","level":2,"score":0.24979937076568604},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.18100672960281372}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:epic.awi.de:35933","doi":null,"is_oa":true,"landing_page_url":"https://epic.awi.de/id/eprint/35933/1/Mariam_MScThesis_20140601.pdf","pdf_url":"https://epic.awi.de/id/eprint/35933/1/Mariam_MScThesis_20140601.pdf","source":{"id":"https://openalex.org/S4306400378","display_name":"Helmholtz-Zentrum f\u00fcr Polar-und Meeresforschung (Alfred-Wegener-Institut)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2799732068","host_organization_name":"Royal Prince Alfred Hospital","host_organization_lineage":["https://openalex.org/I2799732068"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Thesis"},{"id":"mag:2282010896","doi":null,"is_oa":false,"landing_page_url":"http://dar.aucegypt.edu/handle/10526/3980","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"pmh:oai:epic.awi.de:35933","doi":null,"is_oa":true,"landing_page_url":"https://epic.awi.de/id/eprint/35933/1/Mariam_MScThesis_20140601.pdf","pdf_url":"https://epic.awi.de/id/eprint/35933/1/Mariam_MScThesis_20140601.pdf","source":{"id":"https://openalex.org/S4306400378","display_name":"Helmholtz-Zentrum f\u00fcr Polar-und Meeresforschung (Alfred-Wegener-Institut)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2799732068","host_organization_name":"Royal Prince Alfred Hospital","host_organization_lineage":["https://openalex.org/I2799732068"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Thesis"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320325655","display_name":"American University in Cairo","ror":"https://ror.org/0176yqn58"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2282010896.pdf","grobid_xml":"https://content.openalex.org/works/W2282010896.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W3007130266","https://openalex.org/W2896647011","https://openalex.org/W2734507554","https://openalex.org/W2517972796","https://openalex.org/W2119311989","https://openalex.org/W2888609786","https://openalex.org/W4385423373","https://openalex.org/W2936711265","https://openalex.org/W4282839684","https://openalex.org/W959343067"],"abstract_inverted_index":{"Phytoplankton,":[0],"the":[1,5,36,42,62,73,83,90,132,139,170,198,257,261,305,333],"hidden":[2],"trees":[3],"of":[4,12,35,75,134,141,202,227,264],"ocean,":[6],"are":[7,151,332],"responsible":[8],"for":[9],"nearly":[10],"half":[11],"global":[13,63,104],"oxygen":[14,274],"production.":[15],"Phytoplankton":[16],"growth":[17,327],"and":[18,56,82,124,165,179,218,242,248,260,277,294,339],"productivity":[19],"in":[20,103,117,147,269,313,317],"high-nitrate":[21],"low-chlorophyll":[22],"(HNLC)":[23],"regions":[24,40],"have":[25],"been":[26,88,284,300],"demonstrated":[27],"to":[28,52,71,79,92,100,121,169,256,280,297,342],"be":[29],"limited":[30],"by":[31],"iron":[32,80,122,128,142,163,166,181,253,316,330,343],"availability.":[33],"One":[34],"most":[37],"important":[38,98],"HNLC":[39],"is":[41,96,311,345],"Southern":[43],"Ocean,":[44],"as":[45,112],"it":[46],"regulates":[47],"Earth":[48],"system":[49],"climate":[50],"due":[51,99],"its":[53,58,76,101,237,329,340],"unique":[54],"hydrography":[55],"consequently":[57],"phytoplankton":[59,119,337],"assemblage":[60,78],"drives":[61],"carbon":[64,247,293],"cycle.":[65],"Iron":[66,322],"fertilization":[67],"experiments":[68],"were":[69,189],"conducted":[70],"understand":[72],"response":[74],"photosynthetic":[77,238],"addition,":[81,287],"nanoflagellate":[84],"Phaeocystis":[85],"antarctica":[86,95,110,146,158,235,310,326],"has":[87,283,299],"reported":[89,200,262],"first":[91,199],"bloom.":[93],"P.":[94,109,145,157,203,234,309,325],"ecologically":[97],"contribution":[102],"sulfur":[105],"gases":[106],"emissions.":[107],"Thus,":[108],"fits":[111],"an":[113,213],"ideal":[114],"model":[115],"organism":[116],"understanding":[118],"adaptation":[120,341],"limitation":[123,164,344],"functional":[125],"changes":[126],"following":[127],"addition.":[129,182],"\\n":[130,232],"\\nHere":[131],"results":[133],"a":[135,148,219,225,288,318],"transcriptomic":[136],"study":[137],"assessing":[138],"effect":[140],"repletion":[143],"on":[144],"time-series":[149],"manner":[150],"firstly":[152],"reported.":[153],"A":[154,267],"Ross":[155],"Sea-endemic":[156],"clone":[159],"was":[160,167,173,210],"acclimated":[161],"under":[162],"supplemented":[168],"cultures.":[171],"RNA":[172],"extracted":[174],"at":[175,207,212],"5":[176],"time-points":[177],"before":[178],"after":[180,252],"The":[183],"generated":[184],"389,846,414":[185],"paired-end":[186],"Illumina":[187],"reads":[188],"de":[190],"novo":[191],"assembled":[192],"into":[193],"~88,000":[194],"putative":[195],"genes,":[196],"providing":[197],"transcriptome":[201],"antarctica.":[204],"Differential":[205],"expression":[206,270],"each":[208],"time-point":[209],"inferred":[211],"adjusted":[214],"p-value":[215],"\u2264":[216],"0.001":[217],"log":[220],"fold-change":[221],"\u2265":[222],"5,":[223],"revealing":[224],"total":[226],"2,367":[228],"differentially":[229],"expressed":[230],"genes.":[231],"\\nIron-limited":[233],"recovered":[236],"fitness,":[239],"colony-forming":[240],"ability,":[241],"chlorophyll":[243],"a,":[244],"particulate":[245],"organic":[246],"nitrogen":[249,295],"contents":[250],"shortly":[251],"addition":[254],"comparable":[255],"replete":[258],"control":[259],"values":[263],"healthy":[265],"cells.":[266],"shift":[268,290],"from":[271,291],"iron-economic":[272],"reactive":[273],"species":[275,338],"defense":[276],"photosystem":[278],"II":[279],"iron-dependent":[281],"alternatives":[282],"observed.":[285,301],"In":[286],"metabolic":[289],"structural":[292],"reallocation":[296],"anabolism":[298],"Transcriptomic":[302],"data":[303],"supports":[304],"previous":[306],"studies":[307],"that":[308],"successful":[312],"utilizing":[314],"bound":[315],"reductive":[319],"non-ligand-dependent":[320],"mechanism.":[321],"levels":[323],"limits":[324],"yet":[328],"requirements":[331],"lowest":[334],"among":[335],"all":[336],"well-established.":[346]},"counts_by_year":[{"year":2020,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
