{"id":"https://openalex.org/W2269979508","doi":"https://doi.org/10.1186/s12870-016-0726-3","title":"Transcriptomic, proteomic and metabolic changes in Arabidopsis thaliana leaves after the onset of illumination","display_name":"Transcriptomic, proteomic and metabolic changes in Arabidopsis thaliana leaves after the onset of illumination","publication_year":2016,"publication_date":"2016-02-11","ids":{"openalex":"https://openalex.org/W2269979508","doi":"https://doi.org/10.1186/s12870-016-0726-3","mag":"2269979508","pmid":"https://pubmed.ncbi.nlm.nih.gov/26865323","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/4750186"},"language":"en","primary_location":{"id":"doi:10.1186/s12870-016-0726-3","doi":"https://doi.org/10.1186/s12870-016-0726-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12870-016-0726-3","pdf_url":"https://bmcplantbiol.biomedcentral.com/counter/pdf/10.1186/s12870-016-0726-3","source":{"id":"https://openalex.org/S6444338","display_name":"BMC Plant Biology","issn_l":"1471-2229","issn":["1471-2229"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","jufo-1","ki-jl-1","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Plant Biology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcplantbiol.biomedcentral.com/counter/pdf/10.1186/s12870-016-0726-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Chao Liang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Chao Liang","raw_affiliation_strings":["School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. liangchao_1979@hotmail.com","School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. liangchao_1979@hotmail.com","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016711754","display_name":"Shifeng Cheng","orcid":"https://orcid.org/0000-0003-1617-1747","observed_orcids":["https://orcid.org/0000-0003-1617-1747"]},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Shifeng Cheng","raw_affiliation_strings":["School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. chengshf@genomics.cn","School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. chengshf@genomics.cn","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101847394","display_name":"Youjun Zhang","orcid":"https://orcid.org/0000-0003-1052-0256","observed_orcids":["https://orcid.org/0000-0003-1052-0256"]},"institutions":[{"id":"https://openalex.org/I4210105972","display_name":"Max Planck Institute of Molecular Plant Physiology","ror":"https://ror.org/01fbde567","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210105972"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Youjun Zhang","raw_affiliation_strings":["Max Planck Institute of Molecular Plant Physiology, Am M\u00fchlenberg 1, 14476, Potsdam-Golm, Germany. YOZhang@mpimp-golm.mpg.de","Max Planck Institute of Molecular Plant Physiology, Am M\u00fchlenberg 1, 14476, Potsdam-Golm, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Max Planck Institute of Molecular Plant Physiology, Am M\u00fchlenberg 1, 14476, Potsdam-Golm, Germany. YOZhang@mpimp-golm.mpg.de","institution_ids":["https://openalex.org/I4210105972"]},{"raw_affiliation_string":"Max Planck Institute of Molecular Plant Physiology, Am M\u00fchlenberg 1, 14476, Potsdam-Golm, Germany","institution_ids":["https://openalex.org/I4210105972"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080744549","display_name":"Yuzhe Sun","orcid":"https://orcid.org/0000-0002-1891-7883","observed_orcids":["https://orcid.org/0000-0002-1891-7883"]},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Yuzhe Sun","raw_affiliation_strings":["School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. yzsun@hku.hk","School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. yzsun@hku.hk","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082852942","display_name":"Alisdair Robert Fernie","orcid":"https://orcid.org/0000-0001-9000-335X","observed_orcids":["https://orcid.org/0000-0001-9000-335X"]},"institutions":[{"id":"https://openalex.org/I4210105972","display_name":"Max Planck Institute of Molecular Plant Physiology","ror":"https://ror.org/01fbde567","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210105972"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alisdair R. Fernie","raw_affiliation_strings":["Max Planck Institute of Molecular Plant Physiology, Am M\u00fchlenberg 1, 14476, Potsdam-Golm, Germany. Fernie@mpimp-golm.mpg.de","Max Planck Institute of Molecular Plant Physiology, Am M\u00fchlenberg 1, 14476, Potsdam-Golm, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Max Planck Institute of Molecular Plant Physiology, Am M\u00fchlenberg 1, 14476, Potsdam-Golm, Germany. Fernie@mpimp-golm.mpg.de","institution_ids":["https://openalex.org/I4210105972"]},{"raw_affiliation_string":"Max Planck Institute of Molecular Plant Physiology, Am M\u00fchlenberg 1, 14476, Potsdam-Golm, Germany","institution_ids":["https://openalex.org/I4210105972"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082653594","display_name":"Kang Kang","orcid":"https://orcid.org/0000-0002-7992-282X","observed_orcids":["https://orcid.org/0000-0002-7992-282X"]},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Kang Kang","raw_affiliation_strings":["School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. kkang@connect.hku.hk","School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. kkang@connect.hku.hk","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006091846","display_name":"Gianni Panagiotou","orcid":"https://orcid.org/0000-0001-9393-124X","observed_orcids":["https://orcid.org/0000-0001-9393-124X","https://orcid.org/0000-0003-0128-3076"]},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Gianni Panagiotou","raw_affiliation_strings":["School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. gipa@hku.hk","School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. gipa@hku.hk","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103168266","display_name":"Clive Lo","orcid":"https://orcid.org/0000-0002-1995-3843","observed_orcids":["https://orcid.org/0000-0002-1995-3843","https://orcid.org/0000-0001-5382-6170"]},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Clive Lo","raw_affiliation_strings":["School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. clivelo@hku.hk","School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. clivelo@hku.hk","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052671919","display_name":"Boon Leong Lim","orcid":"https://orcid.org/0000-0002-2720-2353","observed_orcids":["https://orcid.org/0000-0002-2720-2353"]},"institutions":[{"id":"https://openalex.org/I177725633","display_name":"Chinese University of Hong Kong","ror":"https://ror.org/00t33hh48","country_code":"HK","type":"education","lineage":["https://openalex.org/I177725633"]},{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":true,"raw_author_name":"Boon Leong Lim","raw_affiliation_strings":["School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. bllim@hku.hk","State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Shatin, Hong Kong, China. bllim@hku.hk","State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Shatin, Hong Kong, China"],"raw_orcid":"https://orcid.org/0000-0002-2720-2353","affiliations":[{"raw_affiliation_string":"School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China. bllim@hku.hk","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Shatin, Hong Kong, China. bllim@hku.hk","institution_ids":["https://openalex.org/I177725633"]},{"raw_affiliation_string":"State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Shatin, Hong Kong, China","institution_ids":["https://openalex.org/I177725633"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5052671919"],"corresponding_institution_ids":["https://openalex.org/I177725633","https://openalex.org/I889458895"],"apc_list":{"value":3090,"currency":"USD","value_usd":3090},"apc_paid":{"value":3090,"currency":"USD","value_usd":3090},"fwci":1.7964,"has_fulltext":true,"cited_by_count":44,"citation_normalized_percentile":{"value":0.84566694,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"16","issue":"1","first_page":"43","last_page":"43"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10303","display_name":"Photosynthetic Processes and Mechanisms","score":0.9223999977111816,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10303","display_name":"Photosynthetic Processes and Mechanisms","score":0.9223999977111816,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11268","display_name":"Light effects on plants","score":0.0714000016450882,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11882","display_name":"Plant biochemistry and biosynthesis","score":0.0012000000569969416,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/arabidopsis-thaliana","display_name":"Arabidopsis thaliana","score":0.843999981880188},{"id":"https://openalex.org/keywords/post-transcriptional-regulation","display_name":"post-transcriptional regulation","score":0.9959999918937683},{"id":"https://openalex.org/keywords/chloroplast-electron-transport","display_name":"chloroplast electron transport","score":0.640999972820282},{"id":"https://openalex.org/keywords/mitochondrial-respiratory-chain","display_name":"mitochondrial respiratory chain","score":0.6000000238418579},{"id":"https://openalex.org/keywords/calvin-cycle","display_name":"Calvin cycle","score":0.890999972820282},{"id":"https://openalex.org/keywords/carbohydrate-metabolism","display_name":"carbohydrate metabolism","score":0.9549999833106995},{"id":"https://openalex.org/keywords/tricarboxylic-acid-cycle","display_name":"TCA cycle","score":0.9120000004768372},{"id":"https://openalex.org/keywords/glycolysis","display_name":"glycolysis","score":0.7620000243186951},{"id":"https://openalex.org/keywords/plant-metabolism","display_name":"plant metabolism","score":0.3009999990463257}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9433574676513672},{"id":"https://openalex.org/C2775988993","wikidata":"https://www.wikidata.org/wiki/Q158695","display_name":"Arabidopsis thaliana","level":4,"score":0.7773630619049072},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.7536285519599915},{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.5355455875396729},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.404655396938324},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.3548731207847595},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2904794216156006},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20184442400932312},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.17758497595787048},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.10637375712394714}],"mesh":[{"descriptor_ui":"D008027","descriptor_name":"Light","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000528","qualifier_name":"radiation effects","is_major_topic":true},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018515","descriptor_name":"Plant Leaves","qualifier_ui":"Q000528","qualifier_name":"radiation effects","is_major_topic":true},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12870-016-0726-3","doi":"https://doi.org/10.1186/s12870-016-0726-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12870-016-0726-3","pdf_url":"https://bmcplantbiol.biomedcentral.com/counter/pdf/10.1186/s12870-016-0726-3","source":{"id":"https://openalex.org/S6444338","display_name":"BMC Plant Biology","issn_l":"1471-2229","issn":["1471-2229"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","jufo-1","ki-jl-1","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Plant Biology","raw_type":"journal-article"},{"id":"pmid:26865323","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26865323","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC plant biology","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4750186","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC4750186/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Plant Biol","raw_type":"Text"},{"id":"pmh:oai:hub.hku.hk:10722/227646","doi":null,"is_oa":false,"landing_page_url":"http://hdl.handle.net/10722/227646","pdf_url":null,"source":{"id":"https://openalex.org/S4377196271","display_name":"The HKU Scholars Hub (University of Hong Kong)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I889458895","host_organization_name":"University of Hong Kong","host_organization_lineage":["https://openalex.org/I889458895"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:pure.mpg.de:item_2253186","doi":null,"is_oa":false,"landing_page_url":"https://hdl.handle.net/11858/00-001M-0000-0029-C811-D","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Plant Biology","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/s12870-016-0726-3","doi":"https://doi.org/10.1186/s12870-016-0726-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12870-016-0726-3","pdf_url":"https://bmcplantbiol.biomedcentral.com/counter/pdf/10.1186/s12870-016-0726-3","source":{"id":"https://openalex.org/S6444338","display_name":"BMC Plant Biology","issn_l":"1471-2229","issn":["1471-2229"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","jufo-1","ki-jl-1","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Plant Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1293779221","display_name":null,"funder_award_id":"HKU 772012M","funder_id":"https://openalex.org/F4320321592","funder_display_name":"Research Grants Council, University Grants Committee"},{"id":"https://openalex.org/G3635460510","display_name":null,"funder_award_id":"201011159168","funder_id":"https://openalex.org/F4320322170","funder_display_name":"University of Hong Kong"}],"funders":[{"id":"https://openalex.org/F4320321592","display_name":"Research Grants Council, University Grants Committee","ror":"https://ror.org/00djwmt25"},{"id":"https://openalex.org/F4320322170","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86"},{"id":"https://openalex.org/F4320326427","display_name":"Innovation and Technology Fund","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2269979508.pdf","grobid_xml":"https://content.openalex.org/works/W2269979508.grobid-xml"},"referenced_works_count":58,"referenced_works":["https://openalex.org/W1519056532","https://openalex.org/W1539528380","https://openalex.org/W1549912426","https://openalex.org/W1591074079","https://openalex.org/W1594343721","https://openalex.org/W1891475544","https://openalex.org/W1965286936","https://openalex.org/W1992243278","https://openalex.org/W1995880781","https://openalex.org/W1998674709","https://openalex.org/W2000720330","https://openalex.org/W2006317824","https://openalex.org/W2012932442","https://openalex.org/W2014662834","https://openalex.org/W2016634464","https://openalex.org/W2020916135","https://openalex.org/W2024976844","https://openalex.org/W2031825920","https://openalex.org/W2051750514","https://openalex.org/W2056790503","https://openalex.org/W2070734611","https://openalex.org/W2082115497","https://openalex.org/W2091097968","https://openalex.org/W2097341408","https://openalex.org/W2103221638","https://openalex.org/W2106356097","https://openalex.org/W2109103837","https://openalex.org/W2112614454","https://openalex.org/W2119411158","https://openalex.org/W2120016245","https://openalex.org/W2128635872","https://openalex.org/W2128927770","https://openalex.org/W2130110013","https://openalex.org/W2132825995","https://openalex.org/W2139215966","https://openalex.org/W2144544631","https://openalex.org/W2147338745","https://openalex.org/W2149781053","https://openalex.org/W2151346683","https://openalex.org/W2154026614","https://openalex.org/W2154431984","https://openalex.org/W2157406319","https://openalex.org/W2157997018","https://openalex.org/W2158761292","https://openalex.org/W2159482845","https://openalex.org/W2162547778","https://openalex.org/W2162607489","https://openalex.org/W2162772639","https://openalex.org/W2162999029","https://openalex.org/W2167432290","https://openalex.org/W2167576612","https://openalex.org/W2170949754","https://openalex.org/W2171356375","https://openalex.org/W2179410440","https://openalex.org/W2418116501","https://openalex.org/W4294216483","https://openalex.org/W6717443692","https://openalex.org/W7098400432"],"related_works":["https://openalex.org/W7136248560","https://openalex.org/W6958751508","https://openalex.org/W6939903554","https://openalex.org/W2258928506","https://openalex.org/W7136469936","https://openalex.org/W124198304","https://openalex.org/W1891475544","https://openalex.org/W6977778836","https://openalex.org/W7136406932","https://openalex.org/W7099732935"],"abstract_inverted_index":{"BACKGROUND:":[0],"Light":[1],"plays":[2],"an":[3],"important":[4],"role":[5],"in":[6,38,68,111,168,185,204,248],"plant":[7,169,179,249],"growth":[8],"and":[9,29,40,47,76,132,154,189,194,206,224,236],"development.":[10],"In":[11],"this":[12],"study,":[13],"the":[14,33,69,88,91,95,102,112,120,149,158,163,183,222,225,232,246],"impact":[15],"of":[16,20,55,63,71,90,104,119,130,157,165,209,219,221],"light":[17],"on":[18,61],"physiology":[19,250],"20-d-old":[21],"Arabidopsis":[22],"leaves":[23],"was":[24],"examined":[25],"through":[26],"transcriptomic,":[27],"proteomic":[28],"metabolomic":[30],"analysis.":[31],"Since":[32],"energy-generating":[34],"electron":[35],"transport":[36],"chains":[37],"chloroplasts":[39],"mitochondria":[41],"are":[42,114,123,199],"encoded":[43,93,134],"by":[44,94,135],"both":[45],"nuclear":[46,105],"organellar":[48,64],"genomes,":[49],"sequencing":[50],"total":[51],"RNA":[52],"after":[53],"removal":[54],"ribosomal":[56],"RNAs":[57],"provides":[58,174,240],"essential":[59],"information":[60],"transcription":[62,89,103],"genomes.":[65],"The":[66,128,217],"changes":[67,184,203,247],"levels":[70],"ADP,":[72],"ATP,":[73],"NADP(+),":[74],"NADPH":[75],"41":[77],"metabolites":[78,191],"upon":[79,192,215,251],"illumination":[80,193,252],"were":[81],"also":[82],"quantified.":[83],"RESULTS:":[84],"Upon":[85],"illumination,":[86],"while":[87],"genes":[92,106],"plastid":[96],"genome":[97],"did":[98],"not":[99,141],"change":[100],"significantly,":[101],"encoding":[107],"different":[108],"functional":[109],"complexes":[110],"photosystem":[113,159],"differentially":[115],"regulated":[116],"whereas":[117],"members":[118],"same":[121],"complex":[122],"co-regulated":[124],"with":[125],"each":[126],"other.":[127],"abundance":[129],"mRNAs":[131],"proteins":[133],"all":[136],"three":[137],"genomes":[138],"are,":[139],"however,":[140],"always":[142],"positively":[143],"correlated.":[144],"One":[145],"such":[146],"example":[147],"is":[148],"negative":[150],"correlation":[151],"between":[152,202],"mRNA":[153],"protein":[155,207],"abundances":[156,208],"components,":[160],"which":[161,177],"reflects":[162],"importance":[164],"post-transcriptional":[166],"regulation":[167],"physiology.":[170],"CONCLUSION:":[171],"This":[172],"study":[173],"systems-wide":[175],"datasets":[176],"allow":[178],"researchers":[180],"to":[181,195,245,257],"examine":[182],"leaf":[186],"transcriptomes,":[187],"proteomes":[188],"key":[190],"determine":[196],"whether":[197],"there":[198],"any":[200],"correlations":[201],"transcript":[205],"a":[210,241],"particular":[211],"gene":[212],"or":[213],"pathway":[214],"illumination.":[216],"integration":[218],"data":[220],"organelles":[223],"photosystems,":[226],"Calvin-Benson":[227],"cycle,":[228],"carbohydrate":[229],"metabolism,":[230],"glycolysis,":[231],"tricarboxylic":[233],"acid":[234],"cycle":[235],"respiratory":[237],"chain,":[238],"thereby":[239],"more":[242],"complete":[243],"picture":[244],"than":[253],"has":[254],"been":[255],"attained":[256],"date.":[258]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":1}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2016-06-24T00:00:00"}