{"id":"https://openalex.org/W2259246409","doi":"https://doi.org/10.17485/ijst/2016/v9i2/84236","title":"Multiple Sequence Alignment based on Developed Genetic Algorithm","display_name":"Multiple Sequence Alignment based on Developed Genetic Algorithm","publication_year":2016,"publication_date":"2016-01-12","ids":{"openalex":"https://openalex.org/W2259246409","doi":"https://doi.org/10.17485/ijst/2016/v9i2/84236","mag":"2259246409"},"language":"en","primary_location":{"id":"doi:10.17485/ijst/2016/v9i2/84236","doi":"https://doi.org/10.17485/ijst/2016/v9i2/84236","is_oa":true,"landing_page_url":"https://doi.org/10.17485/ijst/2016/v9i2/84236","pdf_url":null,"source":{"id":"https://openalex.org/S2764746358","display_name":"Indian Journal of Science and Technology","issn_l":"0974-5645","issn":["0974-5645","0974-6846"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","norway-1"],"host_organization":"https://openalex.org/P4322615647","host_organization_name":"Indian Society for Education and Environment","host_organization_lineage":["https://openalex.org/P4322615647"],"host_organization_lineage_names":["Indian Society for Education and Environment"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Indian Journal of Science and Technology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://doi.org/10.17485/ijst/2016/v9i2/84236","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035634990","display_name":"H. Nabeel Kaghed","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210128557","display_name":"Ministry of Higher Education and Scientific Research","ror":"https://ror.org/03m5ehy13","country_code":"IQ","type":"government","lineage":["https://openalex.org/I4210128557"]},{"id":"https://openalex.org/I903614036","display_name":"Ministry of Higher Education and Scientific Research","ror":"https://ror.org/00kab6t91","country_code":"AE","type":"government","lineage":["https://openalex.org/I903614036"]}],"countries":["AE","IQ"],"is_corresponding":true,"raw_author_name":"H. Nabeel Kaghed","raw_affiliation_strings":["Ministry of Higher Education and Scientific Research, Head of Supervision and Scientific#R##N#Evaluation Apparatus, Hillah"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ministry of Higher Education and Scientific Research, Head of Supervision and Scientific#R##N#Evaluation Apparatus, Hillah","institution_ids":["https://openalex.org/I4210128557","https://openalex.org/I903614036"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057394057","display_name":"S. Eman Al\u2013Shamery","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I166455938","display_name":"University of Babylon","ror":"https://ror.org/0170edc15","country_code":"IQ","type":"education","lineage":["https://openalex.org/I166455938"]}],"countries":["IQ"],"is_corresponding":false,"raw_author_name":"S. Eman Al\u2013Shamery","raw_affiliation_strings":["Department of Software, College of Information Technology, University of Babylon, Hillah"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Software, College of Information Technology, University of Babylon, Hillah","institution_ids":["https://openalex.org/I166455938"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078261567","display_name":"Fanar Emad Khazaal Al-Khuzaie","orcid":"https://orcid.org/0000-0001-5632-6569","observed_orcids":["https://orcid.org/0000-0001-5632-6569"]},"institutions":[{"id":"https://openalex.org/I166455938","display_name":"University of Babylon","ror":"https://ror.org/0170edc15","country_code":"IQ","type":"education","lineage":["https://openalex.org/I166455938"]}],"countries":["IQ"],"is_corresponding":false,"raw_author_name":"Fanar Emad Khazaal Al-Khuzaie","raw_affiliation_strings":["Department of Software, College of Information Technology, University of Babylon, Hillah"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Software, College of Information Technology, University of Babylon, Hillah","institution_ids":["https://openalex.org/I166455938"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5035634990"],"corresponding_institution_ids":["https://openalex.org/I4210128557","https://openalex.org/I903614036"],"apc_list":null,"apc_paid":null,"fwci":0.5614,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.60912638,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":87,"max":97},"biblio":{"volume":"9","issue":"2","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.8105000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.8105000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.13729999959468842,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.03440000116825104,"subfield":{"id":"https://openalex.org/subfields/2614","display_name":"Theoretical Computer Science"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"multiple sequence alignment","score":1.0},{"id":"https://openalex.org/keywords/genetic-algorithm","display_name":"genetic algorithm","score":0.9800000190734863},{"id":"https://openalex.org/keywords/dna-sequences","display_name":"DNA sequences","score":0.7129999995231628},{"id":"https://openalex.org/keywords/protein-sequences","display_name":"protein sequences","score":0.9649999737739563},{"id":"https://openalex.org/keywords/mutation-probability","display_name":"mutation probability","score":0.7670000195503235},{"id":"https://openalex.org/keywords/crossover-operator","display_name":"crossover operator","score":0.9300000071525574},{"id":"https://openalex.org/keywords/termination-conditions","display_name":"termination conditions","score":0.824999988079071},{"id":"https://openalex.org/keywords/affine-gap-penalty","display_name":"affine gap penalty","score":0.9350000023841858},{"id":"https://openalex.org/keywords/global-alignment","display_name":"global alignment","score":0.7300000190734863},{"id":"https://openalex.org/keywords/local-sequence-alignment","display_name":"local alignment","score":0.8379999995231628},{"id":"https://openalex.org/keywords/heuristic-optimization","display_name":"heuristic optimization","score":0.5580000281333923}],"concepts":[{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.738899827003479},{"id":"https://openalex.org/C8880873","wikidata":"https://www.wikidata.org/wiki/Q187787","display_name":"Genetic algorithm","level":2,"score":0.6893713474273682},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6773055791854858},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.6519179344177246},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6255629658699036},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.5572870373725891},{"id":"https://openalex.org/C180384323","wikidata":"https://www.wikidata.org/wiki/Q16335137","display_name":"Alignment-free sequence analysis","level":5,"score":0.5347643494606018},{"id":"https://openalex.org/C311688","wikidata":"https://www.wikidata.org/wiki/Q2393193","display_name":"Time complexity","level":2,"score":0.5136839747428894},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.4811757504940033},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.4328802824020386},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.4013090133666992},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.23142114281654358},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.19072237610816956},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13811564445495605},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09918850660324097},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.09897246956825256},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.09859734773635864},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.17485/ijst/2016/v9i2/84236","doi":"https://doi.org/10.17485/ijst/2016/v9i2/84236","is_oa":true,"landing_page_url":"https://doi.org/10.17485/ijst/2016/v9i2/84236","pdf_url":null,"source":{"id":"https://openalex.org/S2764746358","display_name":"Indian Journal of Science and Technology","issn_l":"0974-5645","issn":["0974-5645","0974-6846"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","norway-1"],"host_organization":"https://openalex.org/P4322615647","host_organization_name":"Indian Society for Education and Environment","host_organization_lineage":["https://openalex.org/P4322615647"],"host_organization_lineage_names":["Indian Society for Education and Environment"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Indian Journal of Science and Technology","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.17485/ijst/2016/v9i2/84236","doi":"https://doi.org/10.17485/ijst/2016/v9i2/84236","is_oa":true,"landing_page_url":"https://doi.org/10.17485/ijst/2016/v9i2/84236","pdf_url":null,"source":{"id":"https://openalex.org/S2764746358","display_name":"Indian Journal of Science and Technology","issn_l":"0974-5645","issn":["0974-5645","0974-6846"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","norway-1"],"host_organization":"https://openalex.org/P4322615647","host_organization_name":"Indian Society for Education and Environment","host_organization_lineage":["https://openalex.org/P4322615647"],"host_organization_lineage_names":["Indian Society for Education and Environment"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Indian Journal of Science and Technology","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W97315268","https://openalex.org/W1486199311","https://openalex.org/W1486249959","https://openalex.org/W1544329015","https://openalex.org/W1583059700","https://openalex.org/W1990061958","https://openalex.org/W1997611730","https://openalex.org/W2000730583","https://openalex.org/W2018975235","https://openalex.org/W2051428465","https://openalex.org/W2077222448","https://openalex.org/W2086399422","https://openalex.org/W2087135382","https://openalex.org/W2102941368","https://openalex.org/W2128613007","https://openalex.org/W2146338925","https://openalex.org/W2155753975","https://openalex.org/W2171594876","https://openalex.org/W2264162731","https://openalex.org/W2316460735","https://openalex.org/W2996326575"],"related_works":["https://openalex.org/W2145367022","https://openalex.org/W2467173323","https://openalex.org/W2144705020","https://openalex.org/W2096156222","https://openalex.org/W11515763","https://openalex.org/W2186348071","https://openalex.org/W2188248826","https://openalex.org/W7096586550","https://openalex.org/W137913163","https://openalex.org/W1518004059"],"abstract_inverted_index":{"Background:":[0],"Multiple":[1,179,209,245],"Sequences":[2],"Alignment":[3,181,247],"(MSA)":[4],"is":[5,43,156,174],"the":[6,9,20,27,39,53,59,70,153,171,198,205],"one":[7],"of":[8,61,72,105,152,176,197],"most":[10],"important":[11],"research":[12,52],"themes":[13],"in":[14,47,58,88,120,182,220,229],"bioinformatics":[15],"as":[16,96],"well":[17],"known":[18],"that":[19,170],"Genetic":[21,237],"Algorithm":[22],"(GA)":[23],"working":[24],"on":[25,111],"finding":[26,177],"optimal":[28],"solution,":[29],"but":[30],"it":[31,190],"may":[32],"take":[33],"long":[34],"generations":[35],"to":[36,38,79,101,184],"get":[37],"solution":[40],"and":[41,66,91,136,159],"this":[42,51,118,124],"a":[44,80,126,137,160,185,217,230],"problem":[45,119],"especially":[46,228],"protein.":[48],"Methods:":[49],"In":[50,123],"dataset":[54],"has":[55],"been":[56,115,143,202],"used":[57,100,144],"form":[60],"Deoxyribonucleic":[62],"acid":[63],"(DNA)":[64],"sequences,":[65],"protein":[67],"sequences":[68,77,84],"for":[69,117,140,224],"purpose":[71,227],"global":[73],"alignment":[74,211],"all":[75],"these":[76],"belong":[78],"human.":[81],"Aligning":[82],"several":[83],"cannot":[85],"be":[86,99],"done":[87],"polynomial":[89],"time":[90,162],"therefore,":[92],"heuristic":[93],"methods":[94],"such":[95],"GA":[97,155,200],"can":[98],"found":[102],"approximate":[103],"solutions":[104],"MSA":[106],"problems.":[107],"Several":[108],"algorithms":[109,113],"based":[110],"genetic":[112,147,187,214],"have":[114,142,201],"developed":[116,146,206],"recent":[121],"years.":[122],"paper,":[125],"new":[127,133],"evaluation":[128],"process,":[129],"good":[130,161,178],"mutation":[131],"probability,":[132],"recombination":[134],"operators,":[135],"strong":[138],"condition":[139],"termination":[141],"by":[145,204,212],"algorithm.":[148],"Findings:":[149],"The":[150,166,195],"strength":[151],"proposed":[154,172],"excellent":[157],"matching":[158],"with":[163],"less":[164],"storage.":[165],"experimental":[167],"results":[168],"show":[169],"algorithm":[173,188,215],"capable":[175],"Sequence":[180,240,243,246],"contrast":[183],"traditional":[186,199],"while":[189],"uses":[191],"low":[192],"computational":[193],"complexity.":[194],"weaknesses":[196],"solved":[203],"GA.":[207],"Applications:":[208],"sequence":[210],"using":[213],"plays":[216],"vital":[218],"role":[219],"our":[221],"day-to-day":[222],"life":[223],"various":[225],"biological":[226],"clinical":[231],"laboratory.":[232],"Keywords:":[233],"Affine":[234],"Gap":[235],"Penalty,":[236],"Algorithm,":[238],"Global":[239],"Alignment,":[241,244],"Local":[242]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}