{"id":"https://openalex.org/W2254821137","doi":null,"title":"Vapors, fluorescence and bioluminescence: New approaches and insights into plant and microbial processes in the rhizosphere","display_name":"Vapors, fluorescence and bioluminescence: New approaches and insights into plant and microbial processes in the rhizosphere","publication_year":2008,"publication_date":"2008-01-01","ids":{"openalex":"https://openalex.org/W2254821137","mag":"2254821137"},"language":"en","primary_location":{"id":"pmh:oai:digitalcommons.lib.uconn.edu:dissertations-4609","doi":null,"is_oa":false,"landing_page_url":"https://digitalcommons.lib.uconn.edu/dissertations/AAI3293717","pdf_url":null,"source":{"id":"https://openalex.org/S4306401180","display_name":"OpenCommons at University of Connecticut (University of Connecticut)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I140172145","host_organization_name":"University of Connecticut","host_organization_lineage":["https://openalex.org/I140172145"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Doctoral Dissertations","raw_type":"text"},"volume":null,"type":"dissertation","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035611884","display_name":"Patrick M. Herron","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Patrick M. Herron","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5035611884"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10004","display_name":"Soil Carbon and Nitrogen Dynamics","score":0.9682999849319458,"subfield":{"id":"https://openalex.org/subfields/1111","display_name":"Soil Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10004","display_name":"Soil Carbon and Nitrogen Dynamics","score":0.9682999849319458,"subfield":{"id":"https://openalex.org/subfields/1111","display_name":"Soil Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10076","display_name":"Plant-Microbe Interactions and Immunity","score":0.01510000042617321,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.005400000140070915,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rhizosphere","display_name":"rhizosphere","score":0.9729999899864197},{"id":"https://openalex.org/keywords/soil-microbial-activity","display_name":"soil microbial activity","score":0.9610000252723694},{"id":"https://openalex.org/keywords/microbial-growth-efficiency","display_name":"microbial growth efficiency","score":0.9599999785423279},{"id":"https://openalex.org/keywords/soil-water-potential","display_name":"soil water potential","score":0.7440000176429749},{"id":"https://openalex.org/keywords/whole-cell-biosensors","display_name":"whole-cell biosensors","score":0.6919999718666077},{"id":"https://openalex.org/keywords/pantoea-agglomerans","display_name":"Pantoea agglomerans","score":0.953000009059906},{"id":"https://openalex.org/keywords/pseudomonas-putida","display_name":"Pseudomonas putida","score":0.9279999732971191},{"id":"https://openalex.org/keywords/maize","display_name":"maize","score":0.6190000176429749},{"id":"https://openalex.org/keywords/carbon-availability","display_name":"carbon availability","score":0.8970000147819519},{"id":"https://openalex.org/keywords/soil-moisture","display_name":"soil moisture","score":0.3529999852180481},{"id":"https://openalex.org/keywords/soil-carbon-and-nitrogen-cycling","display_name":"soil carbon and nitrogen cycling","score":0.45500001311302185}],"concepts":[{"id":"https://openalex.org/C5176359","wikidata":"https://www.wikidata.org/wiki/Q179924","display_name":"Bioluminescence","level":2,"score":0.907822847366333},{"id":"https://openalex.org/C86626682","wikidata":"https://www.wikidata.org/wiki/Q1124578","display_name":"Rhizosphere","level":3,"score":0.8321546316146851},{"id":"https://openalex.org/C91881484","wikidata":"https://www.wikidata.org/wiki/Q191807","display_name":"Fluorescence","level":2,"score":0.4210605323314667},{"id":"https://openalex.org/C107872376","wikidata":"https://www.wikidata.org/wiki/Q321355","display_name":"Environmental chemistry","level":1,"score":0.41966700553894043},{"id":"https://openalex.org/C183696295","wikidata":"https://www.wikidata.org/wiki/Q2487696","display_name":"Biochemical engineering","level":1,"score":0.4093775749206543},{"id":"https://openalex.org/C39432304","wikidata":"https://www.wikidata.org/wiki/Q188847","display_name":"Environmental science","level":0,"score":0.4020217955112457},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.38747936487197876},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.37551504373550415},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.3367965817451477},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.23872989416122437},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.12045201659202576},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.05615738034248352},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:digitalcommons.lib.uconn.edu:dissertations-4609","doi":null,"is_oa":false,"landing_page_url":"https://digitalcommons.lib.uconn.edu/dissertations/AAI3293717","pdf_url":null,"source":{"id":"https://openalex.org/S4306401180","display_name":"OpenCommons at University of Connecticut (University of Connecticut)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I140172145","host_organization_name":"University of Connecticut","host_organization_lineage":["https://openalex.org/I140172145"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Doctoral Dissertations","raw_type":"text"},{"id":"pmh:oai:opencommons.uconn.edu:dissertations-4609","doi":null,"is_oa":false,"landing_page_url":"https://opencommons.uconn.edu/dissertations/AAI3293717","pdf_url":null,"source":{"id":"https://openalex.org/S4306401180","display_name":"OpenCommons at University of Connecticut (University of Connecticut)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I140172145","host_organization_name":"University of Connecticut","host_organization_lineage":["https://openalex.org/I140172145"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Doctoral Dissertations","raw_type":"text"},{"id":"mag:2254821137","doi":null,"is_oa":false,"landing_page_url":"http://digitalcommons.uconn.edu/dissertations/AAI3293717","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2154913496","https://openalex.org/W2011828785","https://openalex.org/W2099887168","https://openalex.org/W4413006481","https://openalex.org/W7095853009","https://openalex.org/W2046523632","https://openalex.org/W2216777542","https://openalex.org/W2985623412","https://openalex.org/W6992889403","https://openalex.org/W3118574074"],"abstract_inverted_index":{"Soil":[0],"microbial":[1,64,95,126,164],"activity":[2,65],"controls":[3],"the":[4,11,67,78,101,115,175,251,265,285,293,299],"decomposition":[5],"of":[6,13,23,33,69,119,169,206,219,240,245],"organic":[7],"material":[8],"and":[9,25,40,74,111,117,121,171,222,298],"ultimately":[10],"recycling":[12],"key":[14],"nutrients":[15],"up":[16],"into":[17,87],"higher":[18],"trophic":[19],"levels.":[20],"The":[21,196,228,261],"availability":[22,93,118,173,283,320],"water":[24,70,92,170,215,235,254],"energy":[26,282],"(carbon)":[27],"in":[28,58,123,129,142,174,182,193,214,225,253,284],"soils":[29,37,88],"are":[30,38],"critical":[31],"determinants":[32],"this":[34],"activity.":[35],"Yet":[36],"biologically":[39],"structurally":[41],"complex":[42],"systems":[43],"that":[44,185,210,301],"present":[45],"significant":[46],"technical":[47],"hurdles":[48],"to":[49,61,89,147,166,189,212,257,274,279,315],"studying":[50],"these":[51],"processes.":[52],"We":[53],"have":[54],"applied":[55,163],"novel":[56],"methodologies":[57],"three":[59],"experiments":[60],"understand":[62],"soil":[63,143,149,234,267],"at":[66],"intersections":[68],"availability,":[71],"root":[72],"activity,":[73],"carbon":[75,110,120,172,319],"availability.":[76],"In":[77],"first":[79],"experiment,":[80],"we":[81,162,277],"injected":[82],"isotopically-labeled":[83],"acetic":[84],"acid":[85,136],"vapor":[86],"test":[90,131],"whether":[91],"influenced":[94],"growth":[96,127],"efficiency":[97,102],"(MGE).":[98],"MGE":[99],"is":[100],"with":[103],"which":[104],"microbes":[105],"build":[106],"biomass":[107],"from":[108,145,243,308],"assimilated":[109],"fundamentally":[112],"binds":[113],"together":[114],"immobilization":[116],"nitrogen":[122],"soil.":[124,227],"Interestingly,":[125],"efficiencies":[128],"our":[130],"cores,":[132],"determined":[133],"using":[134],"13C-acetic":[135],"gaseous":[137],"injections,":[138],"did":[139],"not":[140],"vary":[141],"ranging":[144],"9.7%":[146],"20.7%":[148],"moisture;":[150],"they":[151],"hovered":[152],"around":[153,321],"47%.":[154],"To":[155],"study":[156,167],"how":[157],"roots":[158,323],"were":[159,179],"influencing":[160],"processes,":[161],"biosensors":[165,178],"patterns":[168],"rhizosphere.":[176,286],"Microbial":[177],"tested":[180],"extensively":[181],"liquid":[183],"cultures":[184],"demonstrated":[186],"their":[187],"ability":[188],"produce":[190],"reliable":[191],"reports":[192],"nonsterile":[194,226],"soils.":[195],"biosensor,":[197],"Pantoea":[198],"agglomerans":[199],"BRT98":[200],"hosted":[201],"a":[202,207,238,275,290,304],"reporter":[203],"system":[204],"consisting":[205],"proU-GFP":[208,229],"construct":[209],"responded":[211],"variation":[213],"potential":[216,255],"(a":[217],"function":[218,239],"both":[220],"osmotic":[221],"matric":[223],"potentials)":[224],"microbiosensor":[230],"reported":[231],"more":[232],"negative":[233],"potentials":[236],"as":[237,272,325,327],"axial":[241],"distance":[242],"tips":[244],"Zea":[246],"mays":[247],"L.":[248],"roots,":[249],"reflecting":[250],"gradient":[252],"hypothesized":[256],"develop":[258],"during":[259],"transpiration.":[260],"second":[262],"biosensor":[263],"used":[264],"common":[266],"bacterium":[268],"Pseudomonas":[269],"putida":[270],"KT2440":[271],"host":[273],"plasmid":[276],"developed":[278],"report":[280,317],"on":[281,318],"Plasmid":[287],"pZKH2":[288],"contains":[289],"fusion":[291],"between":[292],"strong":[294],"constitutive":[295],"promoter":[296],"nptII":[297],"genes":[300],"enocode":[302],"for":[303,324],"light-emitting":[305],"reaction,":[306],"luxCDABE,":[307],"Vibrio":[309],"fischeri.":[310],"Biosensor":[311],"KT2440/pZKH2":[312],"was":[313],"able":[314],"continuously":[316],"plant":[322],"long":[326],"six":[328],"days.":[329],"^":[330]},"counts_by_year":[],"updated_date":"2026-10-27T15:51:10.671819","created_date":"2016-06-24T00:00:00"}