{"id":"https://openalex.org/W2211024906","doi":null,"title":"Transgenic assays for the analysis of DNA repair in plants","display_name":"Transgenic assays for the analysis of DNA repair in plants","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W2211024906","mag":"2211024906"},"language":"en","primary_location":{"id":"pmh:oai:www.uleth.ca:10133/263","doi":null,"is_oa":true,"landing_page_url":"http://hdl.handle.net/10133/263","pdf_url":"http://hdl.handle.net/10133/263","source":{"id":"https://openalex.org/S4306401508","display_name":"Open ULeth Scholarship (OPUS) (University of Lethbridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I107949126","host_organization_name":"University of Lethbridge","host_organization_lineage":["https://openalex.org/I107949126"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Thesis"},"volume":null,"type":"dissertation","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://hdl.handle.net/10133/263","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5105935352","display_name":"Yaroslav Ilnytskyy","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Yaroslav Ilnytskyy","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5105935352"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10123","display_name":"DNA Repair Mechanisms","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10123","display_name":"DNA Repair Mechanisms","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12828","display_name":"Plant Genetic and Mutation Studies","score":0.00039999998989515007,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-repair","display_name":"DNA repair","score":0.8420000076293945},{"id":"https://openalex.org/keywords/double-strand-break-repair","display_name":"DNA double-strand break repair","score":0.9769999980926514},{"id":"https://openalex.org/keywords/homologous-recombination","display_name":"homologous recombination","score":0.8659999966621399},{"id":"https://openalex.org/keywords/genetically-modified-plants","display_name":"transgenic plants","score":0.7059999704360962},{"id":"https://openalex.org/keywords/ultraviolet-radiation","display_name":"ultraviolet radiation","score":0.5609999895095825},{"id":"https://openalex.org/keywords/atm","display_name":"ATM","score":0.8679999709129333},{"id":"https://openalex.org/keywords/base-excision-repair","display_name":"base excision repair","score":0.890999972820282},{"id":"https://openalex.org/keywords/nucleotide-excision-repair","display_name":"nucleotide excision repair","score":0.984000027179718},{"id":"https://openalex.org/keywords/dna-mismatch-repair","display_name":"DNA mismatch repair","score":0.9309999942779541},{"id":"https://openalex.org/keywords/non-homologous-end-joining","display_name":"non-homologous end joining","score":0.9380000233650208},{"id":"https://openalex.org/keywords/single-strand-annealing","display_name":"single-strand annealing","score":0.7770000100135803},{"id":"https://openalex.org/keywords/synthesis-dependent-strand-annealing","display_name":"synthesis-dependent strand annealing","score":0.8130000233650208}],"concepts":[{"id":"https://openalex.org/C102230213","wikidata":"https://www.wikidata.org/wiki/Q430117","display_name":"Transgene","level":3,"score":0.5061489939689636},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4853323996067047},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4668712317943573},{"id":"https://openalex.org/C122172344","wikidata":"https://www.wikidata.org/wiki/Q1503477","display_name":"Genetically modified crops","level":4,"score":0.46519243717193604},{"id":"https://openalex.org/C134935766","wikidata":"https://www.wikidata.org/wiki/Q210538","display_name":"DNA repair","level":3,"score":0.4367803931236267},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.42326128482818604},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.3782529830932617},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.358387291431427},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.12735313177108765}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:www.uleth.ca:10133/263","doi":null,"is_oa":true,"landing_page_url":"http://hdl.handle.net/10133/263","pdf_url":"http://hdl.handle.net/10133/263","source":{"id":"https://openalex.org/S4306401508","display_name":"Open ULeth Scholarship (OPUS) (University of Lethbridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I107949126","host_organization_name":"University of Lethbridge","host_organization_lineage":["https://openalex.org/I107949126"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Thesis"},{"id":"mag:2211024906","doi":null,"is_oa":false,"landing_page_url":"https://opus.uleth.ca/bitstream/10133/263/3/MR17402.pdf","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"pmh:oai:www.uleth.ca:10133/263","doi":null,"is_oa":true,"landing_page_url":"http://hdl.handle.net/10133/263","pdf_url":"http://hdl.handle.net/10133/263","source":{"id":"https://openalex.org/S4306401508","display_name":"Open ULeth Scholarship (OPUS) (University of Lethbridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I107949126","host_organization_name":"University of Lethbridge","host_organization_lineage":["https://openalex.org/I107949126"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Thesis"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2211024906.pdf","grobid_xml":"https://content.openalex.org/works/W2211024906.grobid-xml"},"referenced_works_count":178,"referenced_works":["https://openalex.org/W5094110","https://openalex.org/W116405181","https://openalex.org/W187325922","https://openalex.org/W294261761","https://openalex.org/W382645780","https://openalex.org/W1480404031","https://openalex.org/W1480547785","https://openalex.org/W1491876634","https://openalex.org/W1495843779","https://openalex.org/W1500866123","https://openalex.org/W1512703420","https://openalex.org/W1515564094","https://openalex.org/W1532833901","https://openalex.org/W1546991696","https://openalex.org/W1550717800","https://openalex.org/W1554403921","https://openalex.org/W1570764040","https://openalex.org/W1584878126","https://openalex.org/W1598422449","https://openalex.org/W1627029737","https://openalex.org/W1660787335","https://openalex.org/W1729746476","https://openalex.org/W1748230033","https://openalex.org/W1786881211","https://openalex.org/W1848182468","https://openalex.org/W1952146536","https://openalex.org/W1967219195","https://openalex.org/W1967539918","https://openalex.org/W1967762148","https://openalex.org/W1973648168","https://openalex.org/W1974062259","https://openalex.org/W1974330331","https://openalex.org/W1974701506","https://openalex.org/W1978701785","https://openalex.org/W1981454480","https://openalex.org/W1981610185","https://openalex.org/W1981934737","https://openalex.org/W1983274728","https://openalex.org/W1984743978","https://openalex.org/W1985679430","https://openalex.org/W1985680698","https://openalex.org/W1987397407","https://openalex.org/W1988728159","https://openalex.org/W1988760590","https://openalex.org/W1989645419","https://openalex.org/W1989891256","https://openalex.org/W1991048311","https://openalex.org/W1991387734","https://openalex.org/W1991541044","https://openalex.org/W1992101827","https://openalex.org/W1995654069","https://openalex.org/W2001524751","https://openalex.org/W2001558290","https://openalex.org/W2004370917","https://openalex.org/W2004892627","https://openalex.org/W2007067931","https://openalex.org/W2007635472","https://openalex.org/W2008054069","https://openalex.org/W2008129321","https://openalex.org/W2008843113","https://openalex.org/W2009523540","https://openalex.org/W2010747877","https://openalex.org/W2011320725","https://openalex.org/W2011804819","https://openalex.org/W2012126331","https://openalex.org/W2013028018","https://openalex.org/W2016134181","https://openalex.org/W2016506997","https://openalex.org/W2017912912","https://openalex.org/W2020540440","https://openalex.org/W2023491752","https://openalex.org/W2023793772","https://openalex.org/W2024434976","https://openalex.org/W2026388436","https://openalex.org/W2027223119","https://openalex.org/W2033676950","https://openalex.org/W2033994810","https://openalex.org/W2035741343","https://openalex.org/W2036103078","https://openalex.org/W2036431827","https://openalex.org/W2036684381","https://openalex.org/W2036794974","https://openalex.org/W2040172407","https://openalex.org/W2041322648","https://openalex.org/W2041929141","https://openalex.org/W2041977470","https://openalex.org/W2042569087","https://openalex.org/W2044000184","https://openalex.org/W2044393910","https://openalex.org/W2047804529","https://openalex.org/W2049355822","https://openalex.org/W2050376743","https://openalex.org/W2054183087","https://openalex.org/W2057243520","https://openalex.org/W2058988497","https://openalex.org/W2061151099","https://openalex.org/W2061658361","https://openalex.org/W2064235474","https://openalex.org/W2064700784","https://openalex.org/W2065022250","https://openalex.org/W2065856571","https://openalex.org/W2068210967","https://openalex.org/W2070184329","https://openalex.org/W2074008075","https://openalex.org/W2074516301","https://openalex.org/W2074790695","https://openalex.org/W2076300945","https://openalex.org/W2077120869","https://openalex.org/W2077260273","https://openalex.org/W2078840215","https://openalex.org/W2079659589","https://openalex.org/W2084825928","https://openalex.org/W2086832718","https://openalex.org/W2086842543","https://openalex.org/W2087633346","https://openalex.org/W2087918598","https://openalex.org/W2088474558","https://openalex.org/W2093147224","https://openalex.org/W2094164676","https://openalex.org/W2096136751","https://openalex.org/W2096193904","https://openalex.org/W2097656283","https://openalex.org/W2098271823","https://openalex.org/W2102603170","https://openalex.org/W2104566573","https://openalex.org/W2105908798","https://openalex.org/W2109635885","https://openalex.org/W2113568720","https://openalex.org/W2115234555","https://openalex.org/W2116791893","https://openalex.org/W2117065796","https://openalex.org/W2118514901","https://openalex.org/W2125071927","https://openalex.org/W2126999101","https://openalex.org/W2127049134","https://openalex.org/W2128717251","https://openalex.org/W2130581208","https://openalex.org/W2130728712","https://openalex.org/W2131135801","https://openalex.org/W2132438813","https://openalex.org/W2132614106","https://openalex.org/W2133858761","https://openalex.org/W2134259738","https://openalex.org/W2134527371","https://openalex.org/W2135471702","https://openalex.org/W2136615212","https://openalex.org/W2137082459","https://openalex.org/W2137618022","https://openalex.org/W2139234715","https://openalex.org/W2141865097","https://openalex.org/W2143331361","https://openalex.org/W2143787623","https://openalex.org/W2144550200","https://openalex.org/W2149099892","https://openalex.org/W2151606470","https://openalex.org/W2152145830","https://openalex.org/W2153716111","https://openalex.org/W2154418532","https://openalex.org/W2157149993","https://openalex.org/W2157616199","https://openalex.org/W2161452450","https://openalex.org/W2161523307","https://openalex.org/W2164903782","https://openalex.org/W2165932788","https://openalex.org/W2169637630","https://openalex.org/W2169965886","https://openalex.org/W2170200928","https://openalex.org/W2170811853","https://openalex.org/W2170856153","https://openalex.org/W2171775098","https://openalex.org/W2172018319","https://openalex.org/W2172916891","https://openalex.org/W2173751778","https://openalex.org/W2174944132","https://openalex.org/W2213525005","https://openalex.org/W2415676249","https://openalex.org/W2600503317","https://openalex.org/W7214215354"],"related_works":["https://openalex.org/W4205638081","https://openalex.org/W2223413799","https://openalex.org/W2047902929","https://openalex.org/W7099077053","https://openalex.org/W2145991614","https://openalex.org/W2116082487","https://openalex.org/W1972566829","https://openalex.org/W2149099892","https://openalex.org/W2019918708","https://openalex.org/W2166221068"],"abstract_inverted_index":{"In":[0],"this":[1],"work":[2],"we":[3],"studied":[4],"various":[5],"aspects":[6],"of":[7,52,63,123],"DNA":[8,53,104],"repair":[9,17,54,68,89,105,136,168,184,198,247],"in":[10,37,70,98,110,139],"plants,":[11],"focusing":[12],"mainly":[13],"on":[14],"point":[15,28,71,100,111],"mutation":[16,29,72,101,112],"and":[18,30,59,66,190],"its":[19],"interconnection":[20],"with":[21],"double-strand":[22,87],"break":[23,88,152,244],"repair.We":[24],"were":[25],"using":[26],"transgenic":[27,43],"recombination":[31,45,80,175],"substrates":[32],"as":[33],"a":[34],"primary":[35],"tool":[36],"our":[38],"experiments.We":[39],"have":[40],"compared":[41],"two":[42],"homologous":[44],"assays":[46],"(J3glucuronidase-and":[47],"luciferase-based),":[48],"analyzed":[49],"the":[50,61,76,78],"sensitivity":[51],"machinery":[55,90],"to":[56,93,119],"ultraviolet":[57,94],"radiation":[58,181],"assessed":[60],"involvement":[62],"AtKu80,":[64],"Atm":[65],"AtXpd":[67],"genes":[69,106],"repair.Our":[73],"study":[74],"revealed":[75],"following:":[77],"luciferase-based":[79],"assay":[81],"is":[82,91],"more":[83],"sensitive":[84,92],"then":[85],"ft-glucuronidase-based;":[86],"radiation,":[95],"which":[96],"results":[97],"increased":[99],"formation;":[102],"chosen":[103],"might":[107],"be":[108],"impaired":[109],"repair,":[113],"however":[114],"further":[115],"experimentations":[116],"are":[117],"needed":[118],"confirm":[120],"this.iii":[121],"List":[122],"Abbreviations":[124],"6-4PP":[125],"-6-4":[126],"pyrimidine":[127,148],"pyrimidone":[128],"8-OHdG":[129],"-8-hydroxydeoxyguanosine":[130],"AP":[131],"-apurinic/apyrimidinic":[132],"BER":[133],"-base":[134],"excision":[135,197],"CAK":[137],"-component":[138],"associated":[140],"complex":[141],"CaMV":[142],"-cauliflower":[143],"mosaic":[144],"virus":[145],"CPD":[146],"-cyclobutane":[147],"dimmer":[149],"DSB":[150],"-double-strand":[151],"EMS":[153],"-ethylmetane":[154],"sulfonate":[155,187],"EYFP":[156],"-yellow":[157],"fluorescent":[158],"protein":[159],"FYDR":[160],"-fluorescent":[161],"yellow":[162],"direct":[163],"repeat":[164],"GGR":[165],"-global":[166],"genomic":[167],"hGH":[169],"-human":[170],"growth":[171],"hormone":[172],"HR":[173],"-homologous":[174],"IDL":[176],"-insertion/deletion":[177],"loop":[178],"IR":[179],"-ionizing":[180],"MMR":[182],"-mismatch":[183],"MMS":[185],"-methylmetane":[186],"MS":[188],"-Murashige":[189],"Skoog":[191],"(medium)":[192],"NAC":[193],"-N-acetyl-L-acetyl":[194],"NER":[195],"-nucleotide":[196],"NHEJ":[199],"-non-homologous":[200],"end":[201],"joining":[202],"PAM":[203],"-polycyclic":[204],"aromatic":[205],"hydrocarbons":[206],"PCB":[207],"-polychlorinated":[208],"biphenils":[209],"PCD":[210],"-programmed":[211],"cell":[212],"death":[213],"PCR":[214,230],"-polymerase":[215],"chain":[216],"reaction":[217],"PPT":[218],"-phosphinotricin":[219],"RF":[220],"-recombination":[221],"frequency":[222],"x":[223],"ROS":[224],"-reactive":[225],"oxygen":[226],"species":[227],"RT-PCR":[228],"-real-time":[229],"SCID":[231],"-severe":[232],"combined":[233],"immunodeficiency":[234],"SDSA":[235],"-synthesis-dependent":[236],"strand":[237],"annealing":[238,241],"SSA":[239],"-single-strand":[240,243],"SSB":[242],"TCR":[245],"-transcription-coupled":[246],"UV":[248],"-ultraviolet":[249,252,258,264],"(light)":[250],"UV-A":[251],"light":[253,259,265],"(400":[254],"-320":[255],"ran)":[256],"UV-B":[257],"(320":[260],"-290":[261],"nm)":[262,268],"UV-C":[263],"(290":[266],"-100":[267],"xi":[269]},"counts_by_year":[],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
