{"id":"https://openalex.org/W2180679883","doi":"https://doi.org/10.1093/gbe/evv211","title":"Defining the genome features ofEscherichia albertii, an emerging enteropathogen closely related toEscherichia coli","display_name":"Defining the genome features ofEscherichia albertii, an emerging enteropathogen closely related toEscherichia coli","publication_year":2015,"publication_date":"2015-11-03","ids":{"openalex":"https://openalex.org/W2180679883","doi":"https://doi.org/10.1093/gbe/evv211","mag":"2180679883","pmid":"https://pubmed.ncbi.nlm.nih.gov/26537224"},"language":"en","primary_location":{"id":"doi:10.1093/gbe/evv211","doi":"https://doi.org/10.1093/gbe/evv211","is_oa":true,"landing_page_url":"https://doi.org/10.1093/gbe/evv211","pdf_url":null,"source":{"id":"https://openalex.org/S10195028","display_name":"Genome Biology and Evolution","issn_l":"1759-6653","issn":["1759-6653"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-d","doyens","jufo-2","ki-jl-2","medline","norway-2","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biology and Evolution","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/gbe/evv211","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025773559","display_name":"Tadasuke Ooka","orcid":"https://orcid.org/0000-0002-2859-6948","observed_orcids":["https://orcid.org/0000-0002-2859-6948"]},"institutions":[{"id":"https://openalex.org/I107139324","display_name":"Kagoshima University","ror":"https://ror.org/03ss88z23","country_code":"JP","type":"education","lineage":["https://openalex.org/I107139324"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tadasuke Ooka","raw_affiliation_strings":["Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Japan","institution_ids":["https://openalex.org/I107139324"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006938481","display_name":"Yoshitoshi Ogura","orcid":"https://orcid.org/0000-0002-4509-2653","observed_orcids":["https://orcid.org/0000-0002-4509-2653"]},"institutions":[{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yoshitoshi Ogura","raw_affiliation_strings":["Department of Bacteriology, Faculty of Medical Sciences, Kyushu University, Fukuoka, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bacteriology, Faculty of Medical Sciences, Kyushu University, Fukuoka, Japan","institution_ids":["https://openalex.org/I135598925"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076517409","display_name":"Keisuke Katsura","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I118574687","display_name":"University of Miyazaki","ror":"https://ror.org/0447kww10","country_code":"JP","type":"education","lineage":["https://openalex.org/I118574687"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Keisuke Katsura","raw_affiliation_strings":["Division of Microbiology, Department of Infectious Diseases, Faculty of Medicine, University of Miyazaki, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Microbiology, Department of Infectious Diseases, Faculty of Medicine, University of Miyazaki, Japan","institution_ids":["https://openalex.org/I118574687"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008992267","display_name":"Kazuko Seto","orcid":"https://orcid.org/0000-0002-3841-0254","observed_orcids":["https://orcid.org/0000-0002-3841-0254"]},"institutions":[{"id":"https://openalex.org/I4210119047","display_name":"Osaka Prefectural Institute of Public Health","ror":"https://ror.org/01qwa2z73","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210119047"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kazuko Seto","raw_affiliation_strings":["Division of Bacteriology, Osaka Prefectural Institute of Public Health, Osaka, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Bacteriology, Osaka Prefectural Institute of Public Health, Osaka, Japan","institution_ids":["https://openalex.org/I4210119047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080449029","display_name":"Hideki Kobayashi","orcid":"https://orcid.org/0000-0001-9319-0621","observed_orcids":["https://orcid.org/0000-0001-9319-0621"]},"institutions":[{"id":"https://openalex.org/I4210152963","display_name":"National Institute of Animal Health","ror":"https://ror.org/051ppg660","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1323638106","https://openalex.org/I4210152963"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hideki Kobayashi","raw_affiliation_strings":["Center for Animal Disease Control and Prevention, National Institute of Animal Health, Ibaraki, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Animal Disease Control and Prevention, National Institute of Animal Health, Ibaraki, Japan","institution_ids":["https://openalex.org/I4210152963"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111447078","display_name":"Kimiko Kawano","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4405257767","display_name":"Miyazaki Prefectural Institute for Public Health and Environment","ror":"https://ror.org/05n6vkd45","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4405257767"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kimiko Kawano","raw_affiliation_strings":["Department of Microbiology, Miyazaki Prefectural Institute for Public Health and Environment, Miyazaki, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Miyazaki Prefectural Institute for Public Health and Environment, Miyazaki, Japan","institution_ids":["https://openalex.org/I4405257767"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070520526","display_name":"Eisuke Tokuoka","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4405253066","display_name":"Kumamoto Prefectural Institute of Public-Health and Environmental Science","ror":"https://ror.org/008z75r39","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4405253066"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Eisuke Tokuoka","raw_affiliation_strings":["Division of Microbiology, Kumamoto Prefectural Institute of Public Health and Environmental Science, Kumamoto, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Microbiology, Kumamoto Prefectural Institute of Public Health and Environmental Science, Kumamoto, Japan","institution_ids":["https://openalex.org/I4405253066"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072363819","display_name":"Masato Furukawa","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4405253066","display_name":"Kumamoto Prefectural Institute of Public-Health and Environmental Science","ror":"https://ror.org/008z75r39","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4405253066"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masato Furukawa","raw_affiliation_strings":["Division of Microbiology, Kumamoto Prefectural Institute of Public Health and Environmental Science, Kumamoto, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Microbiology, Kumamoto Prefectural Institute of Public Health and Environmental Science, Kumamoto, Japan","institution_ids":["https://openalex.org/I4405253066"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024603483","display_name":"Seiya Harada","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4405253066","display_name":"Kumamoto Prefectural Institute of Public-Health and Environmental Science","ror":"https://ror.org/008z75r39","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4405253066"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Seiya Harada","raw_affiliation_strings":["Division of Microbiology, Kumamoto Prefectural Institute of Public Health and Environmental Science, Kumamoto, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Microbiology, Kumamoto Prefectural Institute of Public Health and Environmental Science, Kumamoto, Japan","institution_ids":["https://openalex.org/I4405253066"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114065774","display_name":"Shuji Yoshino","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4405257767","display_name":"Miyazaki Prefectural Institute for Public Health and Environment","ror":"https://ror.org/05n6vkd45","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4405257767"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shuji Yoshino","raw_affiliation_strings":["Department of Microbiology, Miyazaki Prefectural Institute for Public Health and Environment, Miyazaki, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Miyazaki Prefectural Institute for Public Health and Environment, Miyazaki, Japan","institution_ids":["https://openalex.org/I4405257767"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035358691","display_name":"Junji Seto","orcid":"https://orcid.org/0000-0003-2227-5315","observed_orcids":["https://orcid.org/0000-0003-2227-5315"]},"institutions":[{"id":"https://openalex.org/I4210136163","display_name":"Yamagata Prefectural Institute of Public Health","ror":"https://ror.org/04em1gv44","country_code":"JP","type":"education","lineage":["https://openalex.org/I4210136163"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Junji Seto","raw_affiliation_strings":["Department of Microbiology, Yamagata Prefectural Institute of Public Health, Yamagata, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Yamagata Prefectural Institute of Public Health, Yamagata, Japan","institution_ids":["https://openalex.org/I4210136163"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111761114","display_name":"Tetsuya Ikeda","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210158475","display_name":"Hokkaido Institute of Public Health","ror":"https://ror.org/050hwd209","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210158475"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tetsuya Ikeda","raw_affiliation_strings":["Department of Infection Diseases Bacteriology, Hokkaido Institute of Public Health, Hokkaido, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infection Diseases Bacteriology, Hokkaido Institute of Public Health, Hokkaido, Japan","institution_ids":["https://openalex.org/I4210158475"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Keiji Yamaguchi","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210158475","display_name":"Hokkaido Institute of Public Health","ror":"https://ror.org/050hwd209","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210158475"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Keiji Yamaguchi","raw_affiliation_strings":["Department of Infection Diseases Bacteriology, Hokkaido Institute of Public Health, Hokkaido, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infection Diseases Bacteriology, Hokkaido Institute of Public Health, Hokkaido, Japan","institution_ids":["https://openalex.org/I4210158475"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064494933","display_name":"Kazunori Murase","orcid":"https://orcid.org/0000-0002-7202-4357","observed_orcids":["https://orcid.org/0000-0002-7202-4357"]},"institutions":[{"id":"https://openalex.org/I118574687","display_name":"University of Miyazaki","ror":"https://ror.org/0447kww10","country_code":"JP","type":"education","lineage":["https://openalex.org/I118574687"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kazunori Murase","raw_affiliation_strings":["Division of Microbiology, Department of Infectious Diseases, Faculty of Medicine, University of Miyazaki, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Microbiology, Department of Infectious Diseases, Faculty of Medicine, University of Miyazaki, Japan","institution_ids":["https://openalex.org/I118574687"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051599485","display_name":"Yasuhiro Gotoh","orcid":"https://orcid.org/0000-0001-9716-2820","observed_orcids":["https://orcid.org/0000-0001-9716-2820"]},"institutions":[{"id":"https://openalex.org/I118574687","display_name":"University of Miyazaki","ror":"https://ror.org/0447kww10","country_code":"JP","type":"education","lineage":["https://openalex.org/I118574687"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yasuhiro Gotoh","raw_affiliation_strings":["Division of Microbiology, Department of Infectious Diseases, Faculty of Medicine, University of Miyazaki, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Microbiology, Department of Infectious Diseases, Faculty of Medicine, University of Miyazaki, Japan","institution_ids":["https://openalex.org/I118574687"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113924742","display_name":"Naoko Imuta","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I107139324","display_name":"Kagoshima University","ror":"https://ror.org/03ss88z23","country_code":"JP","type":"education","lineage":["https://openalex.org/I107139324"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Naoko Imuta","raw_affiliation_strings":["Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Japan","institution_ids":["https://openalex.org/I107139324"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073533078","display_name":"Junichiro Nishi","orcid":"https://orcid.org/0000-0002-2839-9434","observed_orcids":["https://orcid.org/0000-0002-2839-9434"]},"institutions":[{"id":"https://openalex.org/I107139324","display_name":"Kagoshima University","ror":"https://ror.org/03ss88z23","country_code":"JP","type":"education","lineage":["https://openalex.org/I107139324"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Junichiro Nishi","raw_affiliation_strings":["Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Japan","institution_ids":["https://openalex.org/I107139324"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032271232","display_name":"T\u00e2nia A. T. Gomes","orcid":"https://orcid.org/0000-0002-4525-8705","observed_orcids":["https://orcid.org/0000-0002-4525-8705"]},"institutions":[{"id":"https://openalex.org/I107139324","display_name":"Kagoshima University","ror":"https://ror.org/03ss88z23","country_code":"JP","type":"education","lineage":["https://openalex.org/I107139324"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"T\u00e2nia A Gomes","raw_affiliation_strings":["Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Japan","institution_ids":["https://openalex.org/I107139324"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045671781","display_name":"Lothar Beutin","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I107139324","display_name":"Kagoshima University","ror":"https://ror.org/03ss88z23","country_code":"JP","type":"education","lineage":["https://openalex.org/I107139324"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Lothar Beutin","raw_affiliation_strings":["Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Japan","institution_ids":["https://openalex.org/I107139324"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067750112","display_name":"Tetsuya Hayashi","orcid":"https://orcid.org/0000-0001-6366-7177","observed_orcids":["https://orcid.org/0000-0001-6366-7177"]},"institutions":[{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Tetsuya Hayashi","raw_affiliation_strings":["Department of Bacteriology, Faculty of Medical Sciences, Kyushu University, Fukuoka, Japan thayash@bact.med.kyushu-u.ac.jp","Department of Bacteriology, Faculty of Medical Sciences, Kyushu University, Fukuoka, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bacteriology, Faculty of Medical Sciences, Kyushu University, Fukuoka, Japan thayash@bact.med.kyushu-u.ac.jp","institution_ids":["https://openalex.org/I135598925"]},{"raw_affiliation_string":"Department of Bacteriology, Faculty of Medical Sciences, Kyushu University, Fukuoka, Japan","institution_ids":["https://openalex.org/I135598925"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5067750112"],"corresponding_institution_ids":["https://openalex.org/I135598925"],"apc_list":{"value":2850,"currency":"USD","value_usd":2850},"apc_paid":{"value":2850,"currency":"USD","value_usd":2850},"fwci":4.3869,"has_fulltext":false,"cited_by_count":81,"citation_normalized_percentile":{"value":0.9488401,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"7","issue":"12","first_page":"evv211","last_page":"evv211"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10943","display_name":"Escherichia coli research studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10943","display_name":"Escherichia coli research studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13849","display_name":"Enterobacteriaceae and Cronobacter Research","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/escherichia-albertii","display_name":"Escherichia albertii","score":1.0},{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.8019999861717224},{"id":"https://openalex.org/keywords/genome-sequencing","display_name":"genome sequencing","score":0.6420000195503235},{"id":"https://openalex.org/keywords/phylogroups","display_name":"phylogenetic groups","score":0.7350000143051147},{"id":"https://openalex.org/keywords/core-genome","display_name":"core genome","score":0.9890000224113464},{"id":"https://openalex.org/keywords/type-iii-secretion-system","display_name":"type III secretion system","score":0.8560000061988831},{"id":"https://openalex.org/keywords/locus-of-enterocyte-effacement","display_name":"locus of enterocyte effacement","score":0.9340000152587891},{"id":"https://openalex.org/keywords/shiga-toxin","display_name":"Shiga toxin","score":0.7570000290870667},{"id":"https://openalex.org/keywords/flagellar-biosynthesis","display_name":"flagellar biosynthesis","score":0.6679999828338623},{"id":"https://openalex.org/keywords/chemotaxis-genes","display_name":"chemotaxis genes","score":0.9509999752044678},{"id":"https://openalex.org/keywords/virulence-factors","display_name":"virulence factors","score":0.7289999723434448},{"id":"https://openalex.org/keywords/nested-pcr-detection","display_name":"nested PCR detection","score":0.7620000243186951},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"comparative genomics","score":0.6290000081062317}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9267704486846924},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.8298143148422241},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6309454441070557},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5197300910949707},{"id":"https://openalex.org/C2908821069","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli Proteins","level":4,"score":0.5148550868034363},{"id":"https://openalex.org/C2776985332","wikidata":"https://www.wikidata.org/wiki/Q311055","display_name":"Escherichia","level":4,"score":0.4109462797641754},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3289802074432373},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.22883248329162598}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D022761","descriptor_name":"Gene Transfer, Horizontal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022761","descriptor_name":"Gene Transfer, Horizontal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022761","descriptor_name":"Gene Transfer, Horizontal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054308","descriptor_name":"Enteropathogenic Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D054308","descriptor_name":"Enteropathogenic Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D054308","descriptor_name":"Enteropathogenic Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D054308","descriptor_name":"Enteropathogenic Escherichia coli","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D054308","descriptor_name":"Enteropathogenic Escherichia coli","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D054308","descriptor_name":"Enteropathogenic Escherichia coli","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D054308","descriptor_name":"Enteropathogenic Escherichia coli","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D054308","descriptor_name":"Enteropathogenic Escherichia coli","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D054308","descriptor_name":"Enteropathogenic Escherichia coli","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/gbe/evv211","doi":"https://doi.org/10.1093/gbe/evv211","is_oa":true,"landing_page_url":"https://doi.org/10.1093/gbe/evv211","pdf_url":null,"source":{"id":"https://openalex.org/S10195028","display_name":"Genome Biology and Evolution","issn_l":"1759-6653","issn":["1759-6653"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-d","doyens","jufo-2","ki-jl-2","medline","norway-2","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biology and Evolution","raw_type":"journal-article"},{"id":"pmid:26537224","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26537224","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome biology and evolution","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:3679283","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4700944","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:4700944","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4700944","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Genome Biol Evol","raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:gbe:7/12/3170","doi":null,"is_oa":false,"landing_page_url":"http://gbe.oxfordjournals.org/cgi/content/short/7/12/3170","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:www.openagrar.de:openagrar_mods_00018212","doi":null,"is_oa":true,"landing_page_url":"https://www.openagrar.de/receive/openagrar_mods_00018212","pdf_url":null,"source":{"id":"https://openalex.org/S7407055137","display_name":"OpenAgrar","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"doi:10.1093/gbe/evv211","doi":"https://doi.org/10.1093/gbe/evv211","is_oa":true,"landing_page_url":"https://doi.org/10.1093/gbe/evv211","pdf_url":null,"source":{"id":"https://openalex.org/S10195028","display_name":"Genome Biology and Evolution","issn_l":"1759-6653","issn":["1759-6653"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-d","doyens","jufo-2","ki-jl-2","medline","norway-2","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biology and Evolution","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5683000087738037,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"sustainable_development_goals_aurora":[{"score":0.6800000071525574,"display_name":"Life on land","id":"https://metadata.un.org/sdg/15"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G5201939348","display_name":"Epidemiologic and pathogenic features of an emerging enteropathogen, Escherichia albertii","funder_award_id":"25460539","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G8124787675","display_name":"Platform of large scale and high quality genomics and bioinformatics: Towards the advancement of genome sciences in academia","funder_award_id":"221S0002","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G8667807032","display_name":"Transmission of virulence and antibiotic resistance genes among Enteroaggregative Escherichia coli strains isolated from children","funder_award_id":"26461589","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1603238502","https://openalex.org/W1886291337","https://openalex.org/W1936211093","https://openalex.org/W1985517720","https://openalex.org/W1987303255","https://openalex.org/W2039114957","https://openalex.org/W2049459712","https://openalex.org/W2051214094","https://openalex.org/W2052511309","https://openalex.org/W2055298722","https://openalex.org/W2059410416","https://openalex.org/W2065309717","https://openalex.org/W2078684325","https://openalex.org/W2084231307","https://openalex.org/W2095744711","https://openalex.org/W2098900195","https://openalex.org/W2099836442","https://openalex.org/W2113049807","https://openalex.org/W2115687464","https://openalex.org/W2125716477","https://openalex.org/W2142402047","https://openalex.org/W2142586833","https://openalex.org/W2147497340","https://openalex.org/W2150926065","https://openalex.org/W2155645165","https://openalex.org/W2158423461","https://openalex.org/W2162529910","https://openalex.org/W2164225453","https://openalex.org/W2164733234","https://openalex.org/W2170266705","https://openalex.org/W2170747616","https://openalex.org/W2778660502"],"related_works":["https://openalex.org/W2364767690","https://openalex.org/W2360987025","https://openalex.org/W2124781934","https://openalex.org/W2785993273","https://openalex.org/W4211069562","https://openalex.org/W2409448251","https://openalex.org/W1748454507","https://openalex.org/W2982880721","https://openalex.org/W2799462113","https://openalex.org/W2317179423"],"abstract_inverted_index":{"Escherichia":[0,9,55,139],"albertii":[1,71,95,130,235],"is":[2,180],"a":[3,15,167,216,238],"recently":[4],"recognized":[5],"close":[6],"relative":[7],"of":[8,25,48,68,92,106,116,128,136,153,233,244],"coli.":[10,184],"This":[11],"emerging":[12,247],"enteropathogen":[13],"possesses":[14],"type":[16],"III":[17],"secretion":[18],"system":[19,221],"(T3SS)":[20],"encoded":[21],"by":[22],"the":[23,66,93,124,137,230],"locus":[24],"enterocyte":[26],"effacement,":[27],"similar":[28],"to":[29,100,191,222],"enteropathogenic":[30],"and":[31,36,75,83,86,163,166,236],"enterohemorrhagic":[32],"E.":[33,49,70,94,107,117,129,154,183,225,234],"coli":[34,108,176],"(EPEC":[35],"EHEC).":[37],"Shiga":[38],"toxin-producing":[39],"strains":[40,72],"have":[41,57,205,214],"also":[42],"been":[43,60,189,206],"identified.":[44],"The":[45,90],"genomic":[46,88,111,120,231],"features":[47,152,162,232],"albertii,":[50,155],"particularly":[51],"differences":[52],"from":[53,80,98],"other":[54],"species,":[56],"not":[58],"yet":[59],"well":[61],"clarified.":[62],"Here,":[63],"we":[64,213],"sequenced":[65],"genome":[67,127],"29":[69],"(3":[73],"complete":[74],"26":[76],"draft":[77],"sequences)":[78],"isolated":[79],"multiple":[81],"sources":[82],"performed":[84],"intraspecies":[85],"intragenus":[87],"comparisons.":[89],"sizes":[91],"genomes":[96],"range":[97],"4.5":[99],"5.1":[101],"Mb,":[102],"smaller":[103],"than":[104],"those":[105,157],"strains.":[109],"Intraspecies":[110],"comparisons":[112],"identified":[113],"five":[114],"phylogroups":[115],"albertii.":[118,226],"Intragenus":[119],"comparison":[121],"revealed":[122,146],"that":[123,135,179],"possible":[125],"core":[126],"comprises":[131,140],"3,250":[132],"genes,":[133],"whereas":[134],"genus":[138],"1,345":[141],"genes.":[142],"Our":[143,227],"analysis":[144],"further":[145],"several":[147],"unique":[148],"or":[149],"notable":[150],"genetic":[151],"including":[156],"responsible":[158],"for":[159,197,241],"known":[160,172],"biochemical":[161],"virulence":[164],"factors":[165],"possibly":[168],"active":[169],"second":[170],"T3SS":[171,177],"as":[173],"ETT2":[174],"(E.":[175],"2)":[178],"inactivated":[181],"in":[182,194],"Although":[185],"this":[186,245],"organism":[187],"has":[188],"observed":[190],"be":[192],"nonmotile":[193],"vitro,":[195],"genes":[196,204],"flagellar":[198],"biosynthesis":[199],"are":[200],"fully":[201],"conserved;":[202],"chemotaxis-related":[203],"selectively":[207],"deleted.":[208],"Based":[209],"on":[210],"these":[211],"results,":[212],"developed":[215],"nested":[217],"polymerase":[218],"chain":[219],"reaction":[220],"directly":[223],"detect":[224],"data":[228],"define":[229],"provide":[237],"valuable":[239],"basis":[240],"future":[242],"studies":[243],"important":[246],"enteropathogen.":[248]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":15},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":9},{"year":2016,"cited_by_count":3}],"updated_date":"2026-10-14T16:39:01.820549","created_date":"2016-06-24T00:00:00"}