{"id":"https://openalex.org/W2178437531","doi":"https://doi.org/10.1111/mpp.12334","title":"Dual RNA\u2010seq reveals Meloidogyne graminicola transcriptome and candidate effectors during the interaction with rice plants","display_name":"Dual RNA\u2010seq reveals Meloidogyne graminicola transcriptome and candidate effectors during the interaction with rice plants","publication_year":2015,"publication_date":"2015-11-26","ids":{"openalex":"https://openalex.org/W2178437531","doi":"https://doi.org/10.1111/mpp.12334","mag":"2178437531","pmid":"https://pubmed.ncbi.nlm.nih.gov/26610268","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/6638361"},"language":"en","primary_location":{"id":"doi:10.1111/mpp.12334","doi":"https://doi.org/10.1111/mpp.12334","is_oa":true,"landing_page_url":"https://doi.org/10.1111/mpp.12334","pdf_url":"https://bsppjournals.onlinelibrary.wiley.com/doi/pdfdirect/10.1111/mpp.12334","source":{"id":"https://openalex.org/S207933444","display_name":"Molecular Plant Pathology","issn_l":"1364-3703","issn":["1364-3703","1464-6722"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","medline","norway-1","oarl","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Plant Pathology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://bsppjournals.onlinelibrary.wiley.com/doi/pdfdirect/10.1111/mpp.12334","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068289482","display_name":"Anne\u2010Sophie Petitot","orcid":"https://orcid.org/0000-0003-2030-6173","observed_orcids":["https://orcid.org/0000-0003-2030-6173"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"government","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Anne\u2010Sophie Petitot","raw_affiliation_strings":["IRD, UMR IRD\u2010Cirad\u2010UM2 Interactions Plantes\u2010Microbes\u2010Environnement 34394 Montpellier Cedex 5 France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IRD, UMR IRD\u2010Cirad\u2010UM2 Interactions Plantes\u2010Microbes\u2010Environnement 34394 Montpellier Cedex 5 France","institution_ids":["https://openalex.org/I131077856","https://openalex.org/I4210166444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085749572","display_name":"Alexis Dereeper","orcid":"https://orcid.org/0000-0001-8120-8409","observed_orcids":["https://orcid.org/0000-0001-8120-8409"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"government","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Alexis Dereeper","raw_affiliation_strings":["IRD, UMR IRD\u2010Cirad\u2010UM2 Interactions Plantes\u2010Microbes\u2010Environnement 34394 Montpellier Cedex 5 France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IRD, UMR IRD\u2010Cirad\u2010UM2 Interactions Plantes\u2010Microbes\u2010Environnement 34394 Montpellier Cedex 5 France","institution_ids":["https://openalex.org/I131077856","https://openalex.org/I4210166444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055663494","display_name":"Mawuss\u00e9 D. T. Agbessi","orcid":"https://orcid.org/0000-0002-8956-5299","observed_orcids":["https://orcid.org/0000-0002-8956-5299"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"government","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Mawusse Agbessi","raw_affiliation_strings":["IRD, UMR IRD\u2010Cirad\u2010UM2 Interactions Plantes\u2010Microbes\u2010Environnement 34394 Montpellier Cedex 5 France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IRD, UMR IRD\u2010Cirad\u2010UM2 Interactions Plantes\u2010Microbes\u2010Environnement 34394 Montpellier Cedex 5 France","institution_ids":["https://openalex.org/I131077856","https://openalex.org/I4210166444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009921112","display_name":"Corinne Da Silva","orcid":"https://orcid.org/0000-0002-7618-7831","observed_orcids":["https://orcid.org/0000-0002-7618-7831"]},"institutions":[{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Corinne Da Silva","raw_affiliation_strings":["CEA, Institut de G\u00e9nomique, GENOSCOPE \u2010 Centre National de S\u00e9quen\u00e7age 91057 Evry Cedex France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CEA, Institut de G\u00e9nomique, GENOSCOPE \u2010 Centre National de S\u00e9quen\u00e7age 91057 Evry Cedex France","institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4210115028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103898044","display_name":"Julie Guy","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Julie Guy","raw_affiliation_strings":["CEA, Institut de G\u00e9nomique, GENOSCOPE \u2010 Centre National de S\u00e9quen\u00e7age 91057 Evry Cedex France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CEA, Institut de G\u00e9nomique, GENOSCOPE \u2010 Centre National de S\u00e9quen\u00e7age 91057 Evry Cedex France","institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4210115028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085531878","display_name":"Morgane Ardisson","orcid":"https://orcid.org/0000-0002-7323-1497","observed_orcids":["https://orcid.org/0000-0002-7323-1497"]},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Morgane Ardisson","raw_affiliation_strings":["INRA, UMR Am\u00e9lioration G\u00e9n\u00e9tique et Adaptation des Plantes 34060 Montpellier Cedex 1 France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INRA, UMR Am\u00e9lioration G\u00e9n\u00e9tique et Adaptation des Plantes 34060 Montpellier Cedex 1 France","institution_ids":["https://openalex.org/I4210088668"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031339441","display_name":"Diana Fernandez","orcid":"https://orcid.org/0000-0003-1432-3129","observed_orcids":["https://orcid.org/0000-0003-1432-3129"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"government","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Diana Fernandez","raw_affiliation_strings":["IRD, UMR IRD\u2010Cirad\u2010UM2 Interactions Plantes\u2010Microbes\u2010Environnement 34394 Montpellier Cedex 5 France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IRD, UMR IRD\u2010Cirad\u2010UM2 Interactions Plantes\u2010Microbes\u2010Environnement 34394 Montpellier Cedex 5 France","institution_ids":["https://openalex.org/I131077856","https://openalex.org/I4210166444"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5068289482"],"corresponding_institution_ids":["https://openalex.org/I131077856","https://openalex.org/I4210166444"],"apc_list":{"value":3330,"currency":"USD","value_usd":3330},"apc_paid":null,"fwci":6.79,"has_fulltext":true,"cited_by_count":72,"citation_normalized_percentile":{"value":0.96665785,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"17","issue":"6","first_page":"860","last_page":"874"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11179","display_name":"Nematode management and characterization studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11179","display_name":"Nematode management and characterization studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10135","display_name":"Insect-Plant Interactions and Control","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1109","display_name":"Insect Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12858","display_name":"Plant Disease Resistance and Genetics","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/meloidogyne-graminicola","display_name":"Meloidogyne graminicola","score":1.0},{"id":"https://openalex.org/keywords/root-knot-nematode","display_name":"root-knot nematode","score":0.9319999814033508},{"id":"https://openalex.org/keywords/rice","display_name":"rice","score":0.9070000052452087},{"id":"https://openalex.org/keywords/plant-nematode-interaction","display_name":"plant-nematode interaction","score":0.8199999928474426},{"id":"https://openalex.org/keywords/secreted-proteins","display_name":"secreted proteins","score":0.652999997138977},{"id":"https://openalex.org/keywords/effector-genes","display_name":"effector genes","score":0.7649999856948853},{"id":"https://openalex.org/keywords/metallothionein","display_name":"metallothionein","score":0.984000027179718},{"id":"https://openalex.org/keywords/cysteine-rich-proteins","display_name":"cysteine-rich proteins","score":0.9580000042915344},{"id":"https://openalex.org/keywords/de-novo-transcriptome-assembly","display_name":"de novo transcriptome assembly","score":0.7540000081062317},{"id":"https://openalex.org/keywords/nematode-life-cycle","display_name":"nematode life cycle","score":0.6970000267028809},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"gene expression profiling","score":0.6909999847412109},{"id":"https://openalex.org/keywords/in-situ-hybridization","display_name":"in situ hybridization","score":0.7689999938011169},{"id":"https://openalex.org/keywords/plant-parasitic-nematodes","display_name":"plant-parasitic nematodes","score":0.6480000019073486}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9415527582168579},{"id":"https://openalex.org/C51785407","wikidata":"https://www.wikidata.org/wiki/Q2627568","display_name":"Effector","level":2,"score":0.7548602819442749},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.7190173268318176},{"id":"https://openalex.org/C2778039029","wikidata":"https://www.wikidata.org/wiki/Q3113335","display_name":"Graminicola","level":3,"score":0.7030349969863892},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5660353899002075},{"id":"https://openalex.org/C2778543611","wikidata":"https://www.wikidata.org/wiki/Q161426","display_name":"Oryza sativa","level":3,"score":0.5580280423164368},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5385898351669312},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4970541298389435},{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.4659019410610199},{"id":"https://openalex.org/C2778830712","wikidata":"https://www.wikidata.org/wiki/Q5185","display_name":"Nematode","level":2,"score":0.46155616641044617},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.4515390694141388},{"id":"https://openalex.org/C2780306465","wikidata":"https://www.wikidata.org/wiki/Q138622","display_name":"Mycosphaerella graminicola","level":3,"score":0.43932095170021057},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3881613314151764},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.29205119609832764},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.24433904886245728},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008018","descriptor_name":"Life Cycle Stages","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000469","qualifier_name":"parasitology","is_major_topic":true},{"descriptor_ui":"D014431","descriptor_name":"Tylenchoidea","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014431","descriptor_name":"Tylenchoidea","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1111/mpp.12334","doi":"https://doi.org/10.1111/mpp.12334","is_oa":true,"landing_page_url":"https://doi.org/10.1111/mpp.12334","pdf_url":"https://bsppjournals.onlinelibrary.wiley.com/doi/pdfdirect/10.1111/mpp.12334","source":{"id":"https://openalex.org/S207933444","display_name":"Molecular Plant Pathology","issn_l":"1364-3703","issn":["1364-3703","1464-6722"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","medline","norway-1","oarl","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Plant Pathology","raw_type":"journal-article"},{"id":"pmid:26610268","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26610268","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular plant pathology","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6638361","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC6638361/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Mol Plant Pathol","raw_type":"Text"},{"id":"pmh:oai:HAL:hal-02631469v1","doi":null,"is_oa":false,"landing_page_url":"https://hal.inrae.fr/hal-02631469","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4405252976","host_organization_name":"Centre pour la Communication Scientifique Directe","host_organization_lineage":["https://openalex.org/I4405252976"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Molecular Plant Pathology, 2016, 17 (6), pp.860-874. &#x27E8;10.1111/mpp.12334&#x27E9;","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1111/mpp.12334","doi":"https://doi.org/10.1111/mpp.12334","is_oa":true,"landing_page_url":"https://doi.org/10.1111/mpp.12334","pdf_url":"https://bsppjournals.onlinelibrary.wiley.com/doi/pdfdirect/10.1111/mpp.12334","source":{"id":"https://openalex.org/S207933444","display_name":"Molecular Plant Pathology","issn_l":"1364-3703","issn":["1364-3703","1464-6722"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","medline","norway-1","oarl","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Plant Pathology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2","score":0.958299994468689}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323910","display_name":"Institut National de la Recherche Agronomique","ror":"https://ror.org/01x3gbx83"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2178437531.pdf","grobid_xml":"https://content.openalex.org/works/W2178437531.grobid-xml"},"referenced_works_count":56,"referenced_works":["https://openalex.org/W1512577939","https://openalex.org/W1552142539","https://openalex.org/W1835498540","https://openalex.org/W1932899041","https://openalex.org/W1971899779","https://openalex.org/W1975699806","https://openalex.org/W1976136036","https://openalex.org/W1980133202","https://openalex.org/W1981776680","https://openalex.org/W1987096177","https://openalex.org/W1988400448","https://openalex.org/W1996392212","https://openalex.org/W2000338836","https://openalex.org/W2001356769","https://openalex.org/W2006211612","https://openalex.org/W2022401815","https://openalex.org/W2028704597","https://openalex.org/W2034285706","https://openalex.org/W2038944440","https://openalex.org/W2042784183","https://openalex.org/W2052297861","https://openalex.org/W2054080213","https://openalex.org/W2062021629","https://openalex.org/W2072934530","https://openalex.org/W2084964284","https://openalex.org/W2088538886","https://openalex.org/W2094201044","https://openalex.org/W2097065948","https://openalex.org/W2097692668","https://openalex.org/W2100009338","https://openalex.org/W2103441770","https://openalex.org/W2105336352","https://openalex.org/W2105909024","https://openalex.org/W2110065044","https://openalex.org/W2114104545","https://openalex.org/W2116069476","https://openalex.org/W2122503382","https://openalex.org/W2122546565","https://openalex.org/W2124661861","https://openalex.org/W2125198788","https://openalex.org/W2126234318","https://openalex.org/W2127217885","https://openalex.org/W2135937221","https://openalex.org/W2138098955","https://openalex.org/W2140970550","https://openalex.org/W2146101530","https://openalex.org/W2147857793","https://openalex.org/W2150275024","https://openalex.org/W2156005202","https://openalex.org/W2156095709","https://openalex.org/W2156125289","https://openalex.org/W2156841387","https://openalex.org/W2162666803","https://openalex.org/W2164249001","https://openalex.org/W2164272347","https://openalex.org/W2165892239"],"related_works":["https://openalex.org/W2135937221","https://openalex.org/W2606165292","https://openalex.org/W3048334035","https://openalex.org/W2766805644","https://openalex.org/W4384037078","https://openalex.org/W4409564221","https://openalex.org/W4293565796","https://openalex.org/W7213545124","https://openalex.org/W3153347845","https://openalex.org/W2605944955"],"abstract_inverted_index":{"Root-knot":[0],"nematodes":[1,201],"secrete":[2],"proteinaceous":[3],"effectors":[4,198],"into":[5,142],"plant":[6],"tissues":[7],"to":[8,20,48,89],"facilitate":[9],"infection":[10],"by":[11,164,215],"suppressing":[12],"host":[13,18],"defences":[14],"and":[15,35,78,139,175,203,205,239],"reprogramming":[16],"the":[17,56,60,74,86,90,94,120,127,143,186,233,241,247],"metabolism":[19],"their":[21],"benefit.":[22],"Meloidogyne":[23],"graminicola":[24,51,71,104,129,237],"is":[25],"a":[26,97,100,152,158,169,206,220],"major":[27],"pest":[28],"of":[29,44,69,96,106,151,161,172,188,196,210,222,225,235,243,249],"rice":[30,83,121],"(Oryza":[31],"sativa)":[32],"in":[33,82,136,216],"Asia":[34],"Latin":[36],"America,":[37],"causing":[38],"important":[39,229],"crop":[40],"losses.":[41],"The":[42,149,208],"goal":[43],"this":[45,183,254],"study":[46],"was":[47,110,213],"identify":[49],"M.":[50,70,103,128,236],"pathogenicity":[52],"genes":[53,134,144],"expressed":[54],"during":[55],"plant-nematode":[57],"interaction.":[58],"Using":[59],"dual":[61],"RNA-sequencing":[62],"(RNA-seq)":[63],"strategy,":[64],"we":[65],"generated":[66],"transcriptomic":[67],"data":[68,227],"samples":[72],"covering":[73],"pre-parasitic":[75],"J2":[76,88],"stage":[77],"five":[79],"parasitic":[80,87],"stages":[81],"plants,":[84],"from":[85,112,199],"adult":[91],"female.":[92],"In":[93],"absence":[95],"reference":[98],"genome,":[99],"de":[101],"novo":[102],"transcriptome":[105],"66":[107],"396":[108],"contigs":[109],"obtained":[111],"those":[113],"reads":[114],"that":[115],"were":[116],"not":[117],"mapped":[118],"on":[119],"genome.":[122],"Gene":[123],"expression":[124,181,212],"profiling":[125],"across":[126],"life":[130],"cycle":[131],"revealed":[132,157],"key":[133],"involved":[135],"nematode":[137,255],"development":[138,150,248],"provided":[140],"insights":[141],"putatively":[145],"associated":[146],"with":[147,180],"parasitism.":[148],"'secreted":[153],"protein":[154],"prediction'":[155],"pipeline":[156,184],"typical":[159],"set":[160],"proteins":[162,174],"secreted":[163],"nematodes,":[165],"as":[166,168],"well":[167],"large":[170],"number":[171],"cysteine-rich":[173],"putative":[176,190],"nuclear":[177],"proteins.":[178],"Combined":[179],"data,":[182],"enabled":[185],"identification":[187],"15":[189],"effector":[191],"genes,":[192],"including":[193],"two":[194],"homologues":[195],"well-characterized":[197],"cyst":[200],"(CLE-like":[202],"VAP1)":[204],"metallothionein.":[207],"localization":[209],"gene":[211],"assessed":[214],"situ":[217],"hybridization":[218],"for":[219,232,240,246,253],"subset":[221],"candidates.":[223],"All":[224],"these":[226],"represent":[228],"molecular":[230],"resources":[231],"elucidation":[234],"biology":[238],"selection":[242],"potential":[244],"targets":[245],"novel":[250],"control":[251],"strategies":[252],"species.":[256]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":12},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":10},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":6}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2016-06-24T00:00:00"}
