{"id":"https://openalex.org/W2167707450","doi":null,"title":"Transcription profile of cells infected with human T-cell leukemia virus type I compared with activated lymphocytes.","display_name":"Transcription profile of cells infected with human T-cell leukemia virus type I compared with activated lymphocytes.","publication_year":2002,"publication_date":"2002-06-15","ids":{"openalex":"https://openalex.org/W2167707450","mag":"2167707450","pmid":"https://pubmed.ncbi.nlm.nih.gov/12068005"},"language":"en","primary_location":{"id":"pmid:12068005","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/12068005","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Cancer research","raw_type":"Journal Article"},"volume":null,"type":"article","indexed_in":["pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015633898","display_name":"Cynthia A. Pise-Masison","orcid":"https://orcid.org/0000-0003-2788-235X","observed_orcids":["https://orcid.org/0000-0003-2788-235X"]},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cynthia A Pise-Masison","raw_affiliation_strings":["Basic Research Laboratory, Virus Tumor Biology Section, National Cancer Institute, Bethesda, Maryland 20892, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Basic Research Laboratory, Virus Tumor Biology Section, National Cancer Institute, Bethesda, Maryland 20892, USA","institution_ids":["https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111432397","display_name":"Michael F. Radonovich","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Michael Radonovich","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022623946","display_name":"Renaud Mahieux","orcid":"https://orcid.org/0000-0002-5129-6804","observed_orcids":["https://orcid.org/0000-0002-5129-6804"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Renaud Mahieux","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041764877","display_name":"Pramita Chatterjee","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pramita Chatterjee","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052669067","display_name":"Craig C. Whiteford","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Craig Whiteford","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053866775","display_name":"Janet F. Duvall","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Janet Duvall","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069675463","display_name":"Claire Guillerm","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Claire Guillerm","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076494909","display_name":"Antoine Gessain A","orcid":"https://orcid.org/0000-0001-6840-4413","observed_orcids":["https://orcid.org/0000-0001-6840-4413"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Antoine Gessain","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5109269727","display_name":"John N Brady","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"John N Brady","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.0793,"has_fulltext":false,"cited_by_count":66,"citation_normalized_percentile":{"value":0.86912403,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"62","issue":"12","first_page":"3562","last_page":"71"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12159","display_name":"T-cell and Retrovirus Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12159","display_name":"T-cell and Retrovirus Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10685","display_name":"Viral-associated cancers and disorders","score":0.0,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10340","display_name":"Hepatitis B Virus Studies","score":0.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/human-t-cell-leukemia-virus-type-i","display_name":"human T-cell leukemia virus type I","score":0.9660000205039978},{"id":"https://openalex.org/keywords/htlv-1-infection","display_name":"HTLV-1 infection","score":0.7670000195503235},{"id":"https://openalex.org/keywords/adult-t-cell-leukemia-lymphoma","display_name":"adult T-cell leukemia/lymphoma","score":0.7680000066757202},{"id":"https://openalex.org/keywords/htlv-1-associated-myelopathy","display_name":"tropical spastic paraparesis","score":0.972000002861023},{"id":"https://openalex.org/keywords/cd4-t-cells","display_name":"CD4+ T cells","score":0.9079999923706055},{"id":"https://openalex.org/keywords/t-cell-activation","display_name":"T cell activation","score":0.9470000267028809},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"gene expression profiling","score":0.7210000157356262},{"id":"https://openalex.org/keywords/differential-gene-regulation","display_name":"differential gene regulation","score":0.6299999952316284},{"id":"https://openalex.org/keywords/cell-transformation","display_name":"cell transformation","score":0.6230000257492065},{"id":"https://openalex.org/keywords/transcription-factors","display_name":"transcription factors","score":0.6650000214576721},{"id":"https://openalex.org/keywords/cytokines","display_name":"cytokines","score":0.6740000247955322},{"id":"https://openalex.org/keywords/signaling-pathways","display_name":"signaling pathways","score":0.5410000085830688}],"concepts":[{"id":"https://openalex.org/C2776392238","wikidata":"https://www.wikidata.org/wiki/Q1476361","display_name":"Tropical spastic paraparesis","level":4,"score":0.8983358144760132},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7467912435531616},{"id":"https://openalex.org/C2776238826","wikidata":"https://www.wikidata.org/wiki/Q1280388","display_name":"Human T-lymphotropic virus 1","level":4,"score":0.7282944917678833},{"id":"https://openalex.org/C2776913467","wikidata":"https://www.wikidata.org/wiki/Q7667895","display_name":"T-cell leukemia","level":3,"score":0.5955309271812439},{"id":"https://openalex.org/C2778461978","wikidata":"https://www.wikidata.org/wiki/Q29496","display_name":"Leukemia","level":2,"score":0.5570839643478394},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5400804281234741},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.47479671239852905},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.2876734435558319},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2588390111923218},{"id":"https://openalex.org/C2777604421","wikidata":"https://www.wikidata.org/wiki/Q2303951","display_name":"Myelopathy","level":3,"score":0.21583572030067444},{"id":"https://openalex.org/C2780775167","wikidata":"https://www.wikidata.org/wiki/Q9606","display_name":"Spinal cord","level":2,"score":0.0},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D002472","descriptor_name":"Cell Transformation, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002472","descriptor_name":"Cell Transformation, Viral","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008213","descriptor_name":"Lymphocyte Activation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013601","descriptor_name":"T-Lymphocytes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D013601","descriptor_name":"T-Lymphocytes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013601","descriptor_name":"T-Lymphocytes","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D013601","descriptor_name":"T-Lymphocytes","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014158","descriptor_name":"Transcription, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014162","descriptor_name":"Transfection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015368","descriptor_name":"Human T-lymphotropic virus 1","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D015368","descriptor_name":"Human T-lymphotropic virus 1","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015967","descriptor_name":"Gene Expression Regulation, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016207","descriptor_name":"Cytokines","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D016207","descriptor_name":"Cytokines","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017209","descriptor_name":"Apoptosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018123","descriptor_name":"Receptors, Interleukin","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D018123","descriptor_name":"Receptors, Interleukin","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018797","descriptor_name":"Cell Cycle Proteins","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D018797","descriptor_name":"Cell Cycle Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019169","descriptor_name":"Jurkat Cells","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019169","descriptor_name":"Jurkat Cells","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053645","descriptor_name":"Interleukin-2 Receptor alpha Subunit","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"pmid:12068005","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/12068005","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Cancer research","raw_type":"Journal Article"},{"id":"mag:2167707450","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/12068005","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":"PubMed","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.9074000120162964}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":61,"referenced_works":["https://openalex.org/W58744354","https://openalex.org/W166574254","https://openalex.org/W1499156289","https://openalex.org/W1557686543","https://openalex.org/W1565609887","https://openalex.org/W1606216715","https://openalex.org/W1608764077","https://openalex.org/W1644742877","https://openalex.org/W1864024056","https://openalex.org/W1952005996","https://openalex.org/W1965874949","https://openalex.org/W1967960991","https://openalex.org/W1967998659","https://openalex.org/W1970715637","https://openalex.org/W1972683654","https://openalex.org/W1974222206","https://openalex.org/W1989626403","https://openalex.org/W1990957349","https://openalex.org/W1991941671","https://openalex.org/W1997093700","https://openalex.org/W2000623989","https://openalex.org/W2002154440","https://openalex.org/W2002816845","https://openalex.org/W2005529016","https://openalex.org/W2010622874","https://openalex.org/W2010670456","https://openalex.org/W2019698681","https://openalex.org/W2028171591","https://openalex.org/W2028640163","https://openalex.org/W2030511374","https://openalex.org/W2032417513","https://openalex.org/W2044822161","https://openalex.org/W2045772890","https://openalex.org/W2056106902","https://openalex.org/W2062816271","https://openalex.org/W2066591972","https://openalex.org/W2069517404","https://openalex.org/W2069667541","https://openalex.org/W2071592765","https://openalex.org/W2076314401","https://openalex.org/W2085095382","https://openalex.org/W2086143621","https://openalex.org/W2093293884","https://openalex.org/W2094334993","https://openalex.org/W2113898023","https://openalex.org/W2113932826","https://openalex.org/W2116589659","https://openalex.org/W2118433514","https://openalex.org/W2120492514","https://openalex.org/W2125735548","https://openalex.org/W2138059125","https://openalex.org/W2145153016","https://openalex.org/W2148711389","https://openalex.org/W2151694455","https://openalex.org/W2152458930","https://openalex.org/W2154633327","https://openalex.org/W2168298202","https://openalex.org/W2173272098","https://openalex.org/W2173999495","https://openalex.org/W2314460122","https://openalex.org/W2416916901"],"related_works":["https://openalex.org/W4200560825","https://openalex.org/W1987707011","https://openalex.org/W2130774684","https://openalex.org/W2079011320","https://openalex.org/W7099490822","https://openalex.org/W2965963896","https://openalex.org/W2101140906","https://openalex.org/W1985979064","https://openalex.org/W2317511216","https://openalex.org/W1593346487"],"abstract_inverted_index":{"Human":[0],"T-cell":[1,13,39],"leukemia":[2,14],"virus":[3],"type":[4],"I":[5],"(HTLV-I)":[6],"is":[7],"the":[8,16,26,48,67],"etiologic":[9],"agent":[10],"for":[11,29],"adult":[12],"and":[15,42,53,63,104,111],"neurological":[17],"disorder":[18],"tropical":[19],"spastic":[20],"paraparesis/HTLV-I-associated":[21],"myelopathy.":[22],"CD4+":[23],"T":[24],"lymphocytes,":[25,55],"primary":[27],"hosts":[28],"HTLV-I,":[30],"undergo":[31],"a":[32],"series":[33],"of":[34,61,84,90],"changes":[35],"that":[36,75,113],"lead":[37],"to":[38],"activation,":[40],"immortalization,":[41],"transformation.":[43,119],"To":[44],"gain":[45],"insight":[46,108],"into":[47,93,109],"genetic":[49],"differences":[50],"between":[51],"activated":[52,62],"HTLV-I-infected":[54,64],"we":[56,70],"performed":[57],"Affymetrix":[58],"GeneChip":[59],"analysis":[60],"cells.":[65],"Using":[66],"Hu6800":[68],"GeneChip,":[69],"identified":[71],"approximately":[72],"763":[73],"genes":[74,92,110],"had":[76],"differentially":[77,115],"regulated":[78,116],"expression":[79],"in":[80],"at":[81],"least":[82],"three":[83],"five":[85],"HTLV-I":[86,118],"cell":[87],"lines.":[88],"Classification":[89],"these":[91],"functional":[94],"groups":[95],"including":[96],"cellular":[97],"receptors,":[98],"kinases,":[99],"phosphatases,":[100],"cytokines,":[101],"signal":[102],"proteins,":[103],"transcription":[105],"factors":[106],"provides":[107],"pathways":[112],"are":[114],"during":[117]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":7}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2016-06-24T00:00:00"}
