{"id":"https://openalex.org/W2166907873","doi":"https://doi.org/10.1186/gb-2008-9-7-r113","title":"Comparative analysis reveals signatures of differentiation amid genomic polymorphism in Lake Malawi cichlids","display_name":"Comparative analysis reveals signatures of differentiation amid genomic polymorphism in Lake Malawi cichlids","publication_year":2008,"publication_date":"2008-07-10","ids":{"openalex":"https://openalex.org/W2166907873","doi":"https://doi.org/10.1186/gb-2008-9-7-r113","mag":"2166907873","pmid":"https://pubmed.ncbi.nlm.nih.gov/18616806","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/2530870"},"language":"en","primary_location":{"id":"doi:10.1186/gb-2008-9-7-r113","doi":"https://doi.org/10.1186/gb-2008-9-7-r113","is_oa":true,"landing_page_url":"https://doi.org/10.1186/gb-2008-9-7-r113","pdf_url":"https://genomebiology.biomedcentral.com/counter/pdf/10.1186/gb-2008-9-7-r113","source":{"id":"https://openalex.org/S81160022","display_name":"Genome biology","issn_l":"1465-6906","issn":["1465-6906","1465-6914","1474-7596","1474-760X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biology","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://genomebiology.biomedcentral.com/counter/pdf/10.1186/gb-2008-9-7-r113","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002111854","display_name":"Yong\u2010Hwee Eddie Loh","orcid":"https://orcid.org/0000-0002-6185-9279","observed_orcids":["https://orcid.org/0000-0002-6185-9279"]},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yong-Hwee E Loh","raw_affiliation_strings":["School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia 30332, USA. yloh3@gatech.edu","School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia, 30332, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia 30332, USA. yloh3@gatech.edu","institution_ids":["https://openalex.org/I130701444"]},{"raw_affiliation_string":"School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia, 30332, USA","institution_ids":["https://openalex.org/I130701444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025821941","display_name":"Lee S. Katz","orcid":"https://orcid.org/0000-0002-2533-9161","observed_orcids":["https://orcid.org/0000-0002-2533-9161"]},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lee S Katz","raw_affiliation_strings":["School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia, 30332, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia, 30332, USA","institution_ids":["https://openalex.org/I130701444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021045878","display_name":"Meryl C. Mims","orcid":"https://orcid.org/0000-0003-0570-988X","observed_orcids":["https://orcid.org/0000-0003-0570-988X"]},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Meryl C Mims","raw_affiliation_strings":["School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia, 30332, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia, 30332, USA","institution_ids":["https://openalex.org/I130701444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013691786","display_name":"Thomas D. Kocher","orcid":"https://orcid.org/0000-0002-7547-0133","observed_orcids":["https://orcid.org/0000-0002-7547-0133"]},"institutions":[{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas D Kocher","raw_affiliation_strings":["Department of Biology, University of Maryland, College Park, Maryland, 20742, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, University of Maryland, College Park, Maryland, 20742, USA","institution_ids":["https://openalex.org/I66946132"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084213906","display_name":"Soojin V. Yi","orcid":"https://orcid.org/0000-0003-1497-1871","observed_orcids":["https://orcid.org/0000-0003-1497-1871"]},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Soojin V Yi","raw_affiliation_strings":["School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia, 30332, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia, 30332, USA","institution_ids":["https://openalex.org/I130701444"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089799928","display_name":"Jeffrey Todd Streelman","orcid":"https://orcid.org/0000-0003-0057-5069","observed_orcids":["https://orcid.org/0000-0003-0057-5069"]},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"J Todd Streelman","raw_affiliation_strings":["School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia, 30332, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biology, Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 315 Ferst Drive, Atlanta, Georgia, 30332, USA","institution_ids":["https://openalex.org/I130701444"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5089799928"],"corresponding_institution_ids":["https://openalex.org/I130701444"],"apc_list":{"value":5490,"currency":"USD","value_usd":5490},"apc_paid":{"value":5490,"currency":"USD","value_usd":5490},"fwci":8.174,"has_fulltext":true,"cited_by_count":111,"citation_normalized_percentile":{"value":0.98158688,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"9","issue":"7","first_page":"R113","last_page":"R113"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.6255000233650208,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.6255000233650208,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.2493000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.05339999869465828,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/lake-malawi-cichlids","display_name":"Lake Malawi cichlids","score":0.9929999709129333},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphisms","display_name":"single nucleotide polymorphisms","score":0.8989999890327454},{"id":"https://openalex.org/keywords/genetic-differentiation","display_name":"genetic differentiation","score":0.6690000295639038},{"id":"https://openalex.org/keywords/fst-outliers","display_name":"FST outliers","score":0.8080000281333923},{"id":"https://openalex.org/keywords/natural-selection","display_name":"natural selection","score":0.7509999871253967},{"id":"https://openalex.org/keywords/ortholog-identification","display_name":"ortholog identification","score":0.6980000138282776},{"id":"https://openalex.org/keywords/nucleotide-diversity","display_name":"nucleotide diversity","score":0.6349999904632568},{"id":"https://openalex.org/keywords/species-flock","display_name":"species flock","score":0.6010000109672546},{"id":"https://openalex.org/keywords/genotype-phenotype-correlation","display_name":"genotype-phenotype correlation","score":0.8939999938011169},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"comparative genomics","score":0.574999988079071},{"id":"https://openalex.org/keywords/population-structure","display_name":"population structure","score":0.35100001096725464}],"concepts":[{"id":"https://openalex.org/C2778284828","wikidata":"https://www.wikidata.org/wiki/Q3406","display_name":"Cichlid","level":3,"score":0.8888500928878784},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8523917198181152},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.670487105846405},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6295875310897827},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.531328558921814},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5065737962722778},{"id":"https://openalex.org/C2776817793","wikidata":"https://www.wikidata.org/wiki/Q6553369","display_name":"Lineage (genetic)","level":3,"score":0.4931580424308777},{"id":"https://openalex.org/C26589402","wikidata":"https://www.wikidata.org/wiki/Q7068267","display_name":"Nucleotide diversity","level":5,"score":0.47513583302497864},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.4707905352115631},{"id":"https://openalex.org/C81977670","wikidata":"https://www.wikidata.org/wiki/Q585259","display_name":"Genetic diversity","level":3,"score":0.420249879360199},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3406805396080017},{"id":"https://openalex.org/C197754878","wikidata":"https://www.wikidata.org/wiki/Q80711","display_name":"Haplotype","level":4,"score":0.313954621553421},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.3139016330242157},{"id":"https://openalex.org/C2909208804","wikidata":"https://www.wikidata.org/wiki/Q127282","display_name":"Fish <Actinopterygii>","level":2,"score":0.12606579065322876},{"id":"https://openalex.org/C505870484","wikidata":"https://www.wikidata.org/wiki/Q180538","display_name":"Fishery","level":1,"score":0.07138308882713318},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000351","descriptor_name":"Africa, Eastern","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005618","descriptor_name":"Fresh Water","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023681","descriptor_name":"Cichlids","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D023681","descriptor_name":"Cichlids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D029941","descriptor_name":"Fish Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/gb-2008-9-7-r113","doi":"https://doi.org/10.1186/gb-2008-9-7-r113","is_oa":true,"landing_page_url":"https://doi.org/10.1186/gb-2008-9-7-r113","pdf_url":"https://genomebiology.biomedcentral.com/counter/pdf/10.1186/gb-2008-9-7-r113","source":{"id":"https://openalex.org/S81160022","display_name":"Genome biology","issn_l":"1465-6906","issn":["1465-6906","1465-6914","1474-7596","1474-760X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biology","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2530870","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2530870","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biol","raw_type":"Text"},{"id":"pmid:18616806","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18616806","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome biology","raw_type":"Comparative Study"},{"id":"pmh:oai:drum.lib.umd.edu:1903/28193","doi":null,"is_oa":false,"landing_page_url":"http://hdl.handle.net/1903/28193","pdf_url":null,"source":{"id":"https://openalex.org/S4306401518","display_name":"University Libraries (University of Maryland)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I66946132","host_organization_name":"University of Maryland, College Park","host_organization_lineage":["https://openalex.org/I66946132"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:smartech.gatech.edu:1853/30445","doi":null,"is_oa":false,"landing_page_url":"http://hdl.handle.net/1853/30445","pdf_url":null,"source":{"id":"https://openalex.org/S4377196313","display_name":"SMARTech Repository (Georgia Institute of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I130701444","host_organization_name":"Georgia Institute of Technology","host_organization_lineage":["https://openalex.org/I130701444"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"doi:10.13016/tujn-l0gs","doi":"https://doi.org/10.13016/tujn-l0gs","is_oa":true,"landing_page_url":"https://doi.org/10.13016/tujn-l0gs","pdf_url":null,"source":{"id":"https://openalex.org/S4306402644","display_name":"Digital Repository at the University of Maryland (University of Maryland College Park)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I66946132","host_organization_name":"University of Maryland, College Park","host_organization_lineage":["https://openalex.org/I66946132"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1186/gb-2008-9-7-r113","doi":"https://doi.org/10.1186/gb-2008-9-7-r113","is_oa":true,"landing_page_url":"https://doi.org/10.1186/gb-2008-9-7-r113","pdf_url":"https://genomebiology.biomedcentral.com/counter/pdf/10.1186/gb-2008-9-7-r113","source":{"id":"https://openalex.org/S81160022","display_name":"Genome biology","issn_l":"1465-6906","issn":["1465-6906","1465-6914","1474-7596","1474-760X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1054416592","display_name":null,"funder_award_id":"W-7405-Eng-48","funder_id":"https://openalex.org/F4320337509","funder_display_name":"Biological and Environmental Research"},{"id":"https://openalex.org/G1101028137","display_name":null,"funder_award_id":"W-7405-ENG 48","funder_id":"https://openalex.org/F4320338286","funder_display_name":"Lawrence Livermore National Laboratory"},{"id":"https://openalex.org/G1398330795","display_name":null,"funder_award_id":"DE-AC03-?","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G1570530933","display_name":null,"funder_award_id":"DE-AC03-76SF00098","funder_id":"https://openalex.org/F4320338304","funder_display_name":"Los Alamos National Laboratory"},{"id":"https://openalex.org/G1614572836","display_name":null,"funder_award_id":"DE AC03 76SF00098","funder_id":"https://openalex.org/F4320338292","funder_display_name":"Lawrence Berkeley National Laboratory"},{"id":"https://openalex.org/G1643223109","display_name":null,"funder_award_id":"AC03-76SF00098","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G1702950523","display_name":null,"funder_award_id":"W-7405","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G193590374","display_name":null,"funder_award_id":"DEAC03-76SF00098","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G2713861829","display_name":null,"funder_award_id":"W\u20107405\u2010ENG\u201036","funder_id":"https://openalex.org/F4320338304","funder_display_name":"Los Alamos National Laboratory"},{"id":"https://openalex.org/G2787076192","display_name":null,"funder_award_id":"DEAC03-76SF00098","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G3177268909","display_name":null,"funder_award_id":"-7405-Eng-48","funder_id":"https://openalex.org/F4320338286","funder_display_name":"Lawrence Livermore National Laboratory"},{"id":"https://openalex.org/G4091215076","display_name":null,"funder_award_id":"DE-AC03-76SF00098","funder_id":"https://openalex.org/F4320338286","funder_display_name":"Lawrence Livermore National Laboratory"},{"id":"https://openalex.org/G6115782557","display_name":null,"funder_award_id":"W-7405-ENG-36","funder_id":"https://openalex.org/F4320338286","funder_display_name":"Lawrence Livermore National Laboratory"},{"id":"https://openalex.org/G62358869","display_name":null,"funder_award_id":"W-7405-ENG","funder_id":"https://openalex.org/F4320338286","funder_display_name":"Lawrence Livermore National Laboratory"},{"id":"https://openalex.org/G6445123630","display_name":null,"funder_award_id":"-7405-ENG-48","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G660437508","display_name":null,"funder_award_id":"W\u20107405\u2010ENG\u201048","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G6715348216","display_name":"CAREER:  The Evolution of Simple Versus Complex Biomechanical Systems","funder_award_id":"0546423","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6841148600","display_name":null,"funder_award_id":"W-7405-Eng-48","funder_id":"https://openalex.org/F4320338304","funder_display_name":"Los Alamos National Laboratory"},{"id":"https://openalex.org/G7444770027","display_name":null,"funder_award_id":"DE-AC03- 76SF00098","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7852981909","display_name":null,"funder_award_id":"W-7405-ENG-36","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G797745481","display_name":null,"funder_award_id":"W-7405-ENG-36","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G8099852790","display_name":null,"funder_award_id":"DE-AC03-76SF00098","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8548243061","display_name":"The Cichlid Dentition Integrates Tooth Number and Tooth Shape","funder_award_id":"R21DE017182","funder_id":"https://openalex.org/F4320337365","funder_display_name":"National Institute of Dental and Craniofacial Research"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320306151","display_name":"Alfred P. Sloan Foundation","ror":"https://ror.org/052csg198"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332359","display_name":"Office of Science","ror":"https://ror.org/00mmn6b08"},{"id":"https://openalex.org/F4320337365","display_name":"National Institute of Dental and Craniofacial Research","ror":"https://ror.org/004a2wv92"},{"id":"https://openalex.org/F4320337509","display_name":"Biological and Environmental Research","ror":"https://ror.org/0114b2m14"},{"id":"https://openalex.org/F4320338286","display_name":"Lawrence Livermore National Laboratory","ror":"https://ror.org/041nk4h53"},{"id":"https://openalex.org/F4320338292","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02"},{"id":"https://openalex.org/F4320338304","display_name":"Los Alamos National Laboratory","ror":"https://ror.org/01e41cf67"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2166907873.pdf","grobid_xml":"https://content.openalex.org/works/W2166907873.grobid-xml"},"referenced_works_count":69,"referenced_works":["https://openalex.org/W1525734744","https://openalex.org/W1579352620","https://openalex.org/W1832287255","https://openalex.org/W1929950720","https://openalex.org/W1963690906","https://openalex.org/W1966586277","https://openalex.org/W1966711026","https://openalex.org/W1969250533","https://openalex.org/W1976602949","https://openalex.org/W1987608057","https://openalex.org/W1994973630","https://openalex.org/W1997476591","https://openalex.org/W2007690355","https://openalex.org/W2012255900","https://openalex.org/W2014085508","https://openalex.org/W2015964634","https://openalex.org/W2022889556","https://openalex.org/W2024053540","https://openalex.org/W2024704279","https://openalex.org/W2027920373","https://openalex.org/W2033098535","https://openalex.org/W2038382815","https://openalex.org/W2050553296","https://openalex.org/W2055997230","https://openalex.org/W2056541221","https://openalex.org/W2063569129","https://openalex.org/W2064912476","https://openalex.org/W2070286054","https://openalex.org/W2071501400","https://openalex.org/W2073875252","https://openalex.org/W2074765204","https://openalex.org/W2078355347","https://openalex.org/W2082967637","https://openalex.org/W2094026224","https://openalex.org/W2096126997","https://openalex.org/W2096365876","https://openalex.org/W2098126593","https://openalex.org/W2098353360","https://openalex.org/W2100038227","https://openalex.org/W2102854970","https://openalex.org/W2103550490","https://openalex.org/W2104670755","https://openalex.org/W2104905992","https://openalex.org/W2104961736","https://openalex.org/W2112678364","https://openalex.org/W2117508548","https://openalex.org/W2119539687","https://openalex.org/W2121016876","https://openalex.org/W2122503382","https://openalex.org/W2123299130","https://openalex.org/W2128310039","https://openalex.org/W2128579537","https://openalex.org/W2131188316","https://openalex.org/W2135827933","https://openalex.org/W2137427517","https://openalex.org/W2137733130","https://openalex.org/W2138245520","https://openalex.org/W2138659657","https://openalex.org/W2141562991","https://openalex.org/W2143266460","https://openalex.org/W2149480779","https://openalex.org/W2151187352","https://openalex.org/W2153935510","https://openalex.org/W2160217803","https://openalex.org/W2164658669","https://openalex.org/W2165350687","https://openalex.org/W2167055692","https://openalex.org/W2176444624","https://openalex.org/W2254813657"],"related_works":["https://openalex.org/W6940369796","https://openalex.org/W2290899877","https://openalex.org/W7096034320","https://openalex.org/W6948553360","https://openalex.org/W2952624837","https://openalex.org/W1981730196","https://openalex.org/W6958034194","https://openalex.org/W4396224132","https://openalex.org/W4404816490","https://openalex.org/W1966586277"],"abstract_inverted_index":{"BACKGROUND:":[0],"Cichlid":[1],"fish":[2],"from":[3,64,79],"East":[4],"Africa":[5],"are":[6,163,181,219],"remarkable":[7],"for":[8,71,88,166,179],"phenotypic":[9],"and":[10,36,46,94,129,132,174,221],"behavioral":[11],"diversity":[12,105,210],"on":[13],"a":[14,44,124,188,200,229,257],"backdrop":[15],"of":[16,30,33,49,114,126,136,160,190,214,235],"genomic":[17],"similarity.":[18],"In":[19],"2006,":[20],"the":[21,31,56,72,115,194,212,252],"Joint":[22],"Genome":[23],"Institute":[24],"completed":[25],"low":[26],"coverage":[27],"survey":[28],"sequencing":[29,203],"genomes":[32,239],"five":[34,73],"phenotypically":[35,220],"ecologically":[37],"diverse":[38],"Lake":[39,139,216,236],"Malawi":[40,140,195,217],"species.":[41,141],"We":[42,68,117,198],"report":[43],"computational":[45],"comparative":[47],"analysis":[48],"these":[50],"data":[51],"that":[52,58,109,184],"provides":[53],"insight":[54],"into":[55],"mechanisms":[57],"make":[59],"closely":[60],"related":[61],"species":[62,74,151,254],"different":[63],"one":[65],"another.":[66],"RESULTS:":[67],"produced":[69],"assemblies":[70],"ranging":[75],"in":[76,193],"aggregate":[77],"length":[78],"68":[80],"to":[81,122,158,247],"79":[82],"megabase":[83],"pairs,":[84],"identified":[85],"putative":[86],"orthologs":[87],"more":[89,96],"than":[90,97,108],"12,000":[91],"human":[92],"genes,":[93],"predicted":[95],"32,000":[98],"cross-species":[99],"single":[100],"nucleotide":[101],"polymorphisms":[102],"(SNPs).":[103],"Nucleotide":[104],"was":[106],"lower":[107],"found":[110],"among":[111,130],"laboratory":[112],"strains":[113],"zebrafish.":[116],"collected":[118],"around":[119],"36,000":[120],"genotypes":[121],"validate":[123],"subset":[125],"SNPs":[127,246],"within":[128,170],"populations":[131],"across":[133],"multiple":[134],"individuals":[135],"about":[137],"75":[138],"Notably,":[142],"there":[143],"were":[144],"no":[145],"fixed":[146],"differences":[147],"observed":[148],"between":[149,153,172,175],"focal":[150],"nor":[152],"major":[154,176],"lineages.":[155,177],"Roughly":[156],"3%":[157],"5%":[159],"loci":[161],"surveyed":[162],"statistical":[164],"outliers":[165],"genetic":[167],"differentiation":[168],"(FST)":[169],"species,":[171,173],"Outliers":[178],"FST":[180],"candidate":[182],"genes":[183],"may":[185],"have":[186],"experienced":[187],"history":[189],"natural":[191],"selection":[192],"lineage.":[196],"CONCLUSION:":[197],"present":[199],"novel":[201],"genome":[202],"strategy,":[204],"which":[205],"is":[206,211],"useful":[207],"when":[208],"evolutionary":[209],"question":[213],"interest.":[215],"cichlids":[218],"behaviorally":[222],"diverse,":[223],"but":[224],"they":[225],"appear":[226],"genetically":[227],"like":[228],"subdivided":[230],"population.":[231],"The":[232],"unique":[233],"structure":[234],"Malawl":[237],"cichlid":[238],"should":[240],"facilitate":[241],"conceptually":[242],"new":[243],"experiments,":[244],"employing":[245],"identity":[248],"genotype-phenotype":[249],"association,":[250],"using":[251],"entire":[253],"flock":[255],"as":[256],"mapping":[258],"panel.":[259]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":10},{"year":2014,"cited_by_count":8},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":6}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2016-06-24T00:00:00"}