{"id":"https://openalex.org/W2163451936","doi":"https://doi.org/10.1128/aem.00646-07","title":"Genomic Deletion Marking an Emerging Subclone of Francisella tularensis subsp. holarctica in France and the Iberian Peninsula","display_name":"Genomic Deletion Marking an Emerging Subclone of Francisella tularensis subsp. holarctica in France and the Iberian Peninsula","publication_year":2007,"publication_date":"2007-09-22","ids":{"openalex":"https://openalex.org/W2163451936","doi":"https://doi.org/10.1128/aem.00646-07","mag":"2163451936","pmid":"https://pubmed.ncbi.nlm.nih.gov/17890329","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/2168206"},"language":"en","primary_location":{"id":"doi:10.1128/aem.00646-07","doi":"https://doi.org/10.1128/aem.00646-07","is_oa":false,"landing_page_url":"https://doi.org/10.1128/aem.00646-07","pdf_url":null,"source":{"id":"https://openalex.org/S158228368","display_name":"Applied and Environmental Microbiology","issn_l":"0099-2240","issn":["0099-2240","1070-6291","1098-5336"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied and Environmental Microbiology","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2168206","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073358718","display_name":"Michael P. Dempsey","orcid":"https://orcid.org/0000-0001-8814-1788","observed_orcids":["https://orcid.org/0000-0001-8814-1788","https://orcid.org/0000-0002-3644-8275"]},"institutions":[{"id":"https://openalex.org/I4210151970","display_name":"Armed Forces Institute of Pathology","ror":"https://ror.org/04se3fj97","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210151970"]},{"id":"https://openalex.org/I59130452","display_name":"University of Nebraska Medical Center","ror":"https://ror.org/00thqtb16","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I59130452"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. P. Dempsey","raw_affiliation_strings":["Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska","Division of Microbiology, Armed Forces Institute of Pathology, Washington, D.C","Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska; Division of Microbiology, Armed Forces Institute of Pathology, Washington, D.C"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska","institution_ids":["https://openalex.org/I59130452"]},{"raw_affiliation_string":"Division of Microbiology, Armed Forces Institute of Pathology, Washington, D.C","institution_ids":["https://openalex.org/I4210151970"]},{"raw_affiliation_string":"Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska; Division of Microbiology, Armed Forces Institute of Pathology, Washington, D.C","institution_ids":["https://openalex.org/I4210151970","https://openalex.org/I59130452"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111436348","display_name":"Michael E. Dobson","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210151970","display_name":"Armed Forces Institute of Pathology","ror":"https://ror.org/04se3fj97","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210151970"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Dobson","raw_affiliation_strings":["Division of Microbiology, Armed Forces Institute of Pathology, Washington, D.C"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Microbiology, Armed Forces Institute of Pathology, Washington, D.C","institution_ids":["https://openalex.org/I4210151970"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081674581","display_name":"C. Zhang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I114395901","display_name":"University of Nebraska\u2013Lincoln","ror":"https://ror.org/043mer456","country_code":"US","type":"education","lineage":["https://openalex.org/I114395901"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"C. Zhang","raw_affiliation_strings":["Department of Food Science Technology, University of Nebraska at Lincoln, Lincoln, Nebraska"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Food Science Technology, University of Nebraska at Lincoln, Lincoln, Nebraska","institution_ids":["https://openalex.org/I114395901"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056376594","display_name":"M. Zhang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I114395901","display_name":"University of Nebraska\u2013Lincoln","ror":"https://ror.org/043mer456","country_code":"US","type":"education","lineage":["https://openalex.org/I114395901"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Zhang","raw_affiliation_strings":["Department of Food Science Technology, University of Nebraska at Lincoln, Lincoln, Nebraska"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Food Science Technology, University of Nebraska at Lincoln, Lincoln, Nebraska","institution_ids":["https://openalex.org/I114395901"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021580041","display_name":"C. Lion","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210100260","display_name":"Centre Hospitalier R\u00e9gional et Universitaire de Nancy","ror":"https://ror.org/016ncsr12","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210100260"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"C. Lion","raw_affiliation_strings":["Laboratoire de Bacteriologie, Centre Hospitalier et Universitaire, Nancy, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratoire de Bacteriologie, Centre Hospitalier et Universitaire, Nancy, France","institution_ids":["https://openalex.org/I4210100260"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033976161","display_name":"C\u00e9sar Bernardo Guti\u00e9rrez-Mart\u00edn","orcid":"https://orcid.org/0000-0001-5312-3854","observed_orcids":["https://orcid.org/0000-0001-5312-3854"]},"institutions":[{"id":"https://openalex.org/I8833935","display_name":"Universidad de Le\u00f3n","ror":"https://ror.org/02tzt0b78","country_code":"ES","type":"education","lineage":["https://openalex.org/I8833935"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"C. B. Gutie\u0301rrez-Marti\u0301n","raw_affiliation_strings":["Department of Animal Health, Faculty of Veterinary Medicine, University of Leo\u0301n, Leo\u0301n, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Health, Faculty of Veterinary Medicine, University of Leo\u0301n, Leo\u0301n, Spain","institution_ids":["https://openalex.org/I8833935"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069394481","display_name":"Peter C. Iwen","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I59130452","display_name":"University of Nebraska Medical Center","ror":"https://ror.org/00thqtb16","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I59130452"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P. C. Iwen","raw_affiliation_strings":["Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska","institution_ids":["https://openalex.org/I59130452"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007609770","display_name":"Paul D. Fey","orcid":"https://orcid.org/0000-0003-0939-6884","observed_orcids":["https://orcid.org/0000-0003-0939-6884"]},"institutions":[{"id":"https://openalex.org/I59130452","display_name":"University of Nebraska Medical Center","ror":"https://ror.org/00thqtb16","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I59130452"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P. D. Fey","raw_affiliation_strings":["Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska","institution_ids":["https://openalex.org/I59130452"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062485460","display_name":"Merle S. Olson","orcid":"https://orcid.org/0000-0003-3654-7692","observed_orcids":["https://orcid.org/0000-0003-3654-7692"]},"institutions":[{"id":"https://openalex.org/I59130452","display_name":"University of Nebraska Medical Center","ror":"https://ror.org/00thqtb16","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I59130452"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. E. Olson","raw_affiliation_strings":["Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska","institution_ids":["https://openalex.org/I59130452"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069118180","display_name":"Debra M. Niemeyer","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"D. Niemeyer","raw_affiliation_strings":["Modernization Directorate, Office of the Air Force Surgeon General, Falls Church, Virginia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Modernization Directorate, Office of the Air Force Surgeon General, Falls Church, Virginia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081281822","display_name":"Stephen C. Francesconi","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210151970","display_name":"Armed Forces Institute of Pathology","ror":"https://ror.org/04se3fj97","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210151970"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. Francesconi","raw_affiliation_strings":["Division of Microbiology, Armed Forces Institute of Pathology, Washington, D.C"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Microbiology, Armed Forces Institute of Pathology, Washington, D.C","institution_ids":["https://openalex.org/I4210151970"]}]},{"author_position":"middle","author":{"id":null,"display_name":"R. Crawford","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210151970","display_name":"Armed Forces Institute of Pathology","ror":"https://ror.org/04se3fj97","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210151970"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R. Crawford","raw_affiliation_strings":["Division of Microbiology, Armed Forces Institute of Pathology, Washington, D.C"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Microbiology, Armed Forces Institute of Pathology, Washington, D.C","institution_ids":["https://openalex.org/I4210151970"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056273437","display_name":"Miles Stanley","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I203172682","display_name":"Northern Arizona University","ror":"https://ror.org/0272j5188","country_code":"US","type":"education","lineage":["https://openalex.org/I203172682"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Stanley","raw_affiliation_strings":["Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona","institution_ids":["https://openalex.org/I203172682"]}]},{"author_position":"middle","author":{"id":null,"display_name":"J. Rhodes","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I203172682","display_name":"Northern Arizona University","ror":"https://ror.org/0272j5188","country_code":"US","type":"education","lineage":["https://openalex.org/I203172682"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Rhodes","raw_affiliation_strings":["Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona","institution_ids":["https://openalex.org/I203172682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080099109","display_name":"David M. Wagner","orcid":"https://orcid.org/0000-0003-2684-6007","observed_orcids":["https://orcid.org/0000-0003-2684-6007"]},"institutions":[{"id":"https://openalex.org/I203172682","display_name":"Northern Arizona University","ror":"https://ror.org/0272j5188","country_code":"US","type":"education","lineage":["https://openalex.org/I203172682"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. M. Wagner","raw_affiliation_strings":["Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona","institution_ids":["https://openalex.org/I203172682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109122553","display_name":"Amy J. Vogler","orcid":"https://orcid.org/0009-0008-0209-6209","observed_orcids":["https://orcid.org/0009-0008-0209-6209"]},"institutions":[{"id":"https://openalex.org/I203172682","display_name":"Northern Arizona University","ror":"https://ror.org/0272j5188","country_code":"US","type":"education","lineage":["https://openalex.org/I203172682"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. J. Vogler","raw_affiliation_strings":["Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona","institution_ids":["https://openalex.org/I203172682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089723232","display_name":"Dawn N. Birdsell","orcid":"https://orcid.org/0000-0003-0055-9552","observed_orcids":["https://orcid.org/0000-0003-0055-9552"]},"institutions":[{"id":"https://openalex.org/I203172682","display_name":"Northern Arizona University","ror":"https://ror.org/0272j5188","country_code":"US","type":"education","lineage":["https://openalex.org/I203172682"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Birdsell","raw_affiliation_strings":["Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona","institution_ids":["https://openalex.org/I203172682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045601734","display_name":"Paul Keim","orcid":"https://orcid.org/0000-0003-0089-5820","observed_orcids":["https://orcid.org/0000-0003-0089-5820"]},"institutions":[{"id":"https://openalex.org/I203172682","display_name":"Northern Arizona University","ror":"https://ror.org/0272j5188","country_code":"US","type":"education","lineage":["https://openalex.org/I203172682"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P. Keim","raw_affiliation_strings":["Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona","institution_ids":["https://openalex.org/I203172682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022926262","display_name":"Anders F. Johansson","orcid":"https://orcid.org/0000-0003-0548-5943","observed_orcids":["https://orcid.org/0000-0003-0548-5943"]},"institutions":[{"id":"https://openalex.org/I1291458624","display_name":"Swedish Defence Research Agency","ror":"https://ror.org/0470cgs30","country_code":"SE","type":"funder","lineage":["https://openalex.org/I1291458624"]},{"id":"https://openalex.org/I90267481","display_name":"Ume\u00e5 University","ror":"https://ror.org/05kb8h459","country_code":"SE","type":"education","lineage":["https://openalex.org/I90267481"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"A. Johansson","raw_affiliation_strings":["Division of Infectious Diseases, Department of Clinical Microbiology, Umea\u030a University, and Department of NBC Analysis, Swedish Defence Research Agency, Umea\u030a, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Infectious Diseases, Department of Clinical Microbiology, Umea\u030a University, and Department of NBC Analysis, Swedish Defence Research Agency, Umea\u030a, Sweden","institution_ids":["https://openalex.org/I1291458624","https://openalex.org/I90267481"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111613668","display_name":"Steven H. Hinrichs","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I59130452","display_name":"University of Nebraska Medical Center","ror":"https://ror.org/00thqtb16","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I59130452"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. H. Hinrichs","raw_affiliation_strings":["Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska","institution_ids":["https://openalex.org/I59130452"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075744550","display_name":"Andrew K. Benson","orcid":"https://orcid.org/0000-0001-6330-0252","observed_orcids":["https://orcid.org/0000-0001-6330-0252"]},"institutions":[{"id":"https://openalex.org/I114395901","display_name":"University of Nebraska\u2013Lincoln","ror":"https://ror.org/043mer456","country_code":"US","type":"education","lineage":["https://openalex.org/I114395901"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. K. Benson","raw_affiliation_strings":["Department of Food Science Technology, University of Nebraska at Lincoln, Lincoln, Nebraska"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Food Science Technology, University of Nebraska at Lincoln, Lincoln, Nebraska","institution_ids":["https://openalex.org/I114395901"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.8734,"has_fulltext":false,"cited_by_count":37,"citation_normalized_percentile":{"value":0.69890619,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"73","issue":"22","first_page":"7465","last_page":"7470"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11515","display_name":"Bacillus and Francisella bacterial research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11515","display_name":"Bacillus and Francisella bacterial research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12951","display_name":"Burkholderia infections and melioidosis","score":0.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12499","display_name":"Diphtheria, Corynebacterium, and Tetanus","score":0.0,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/francisella-tularensis-subsp-holarctica","display_name":"Francisella tularensis subsp. holarctica","score":1.0},{"id":"https://openalex.org/keywords/genomic-deletions","display_name":"genomic deletions","score":0.9520000219345093},{"id":"https://openalex.org/keywords/clonal-expansion","display_name":"clonal expansion","score":0.9240000247955322},{"id":"https://openalex.org/keywords/tularemia","display_name":"tularemia","score":0.6309999823570251},{"id":"https://openalex.org/keywords/variable-number-of-tandem-repeats","display_name":"variable number tandem repeats","score":0.5979999899864197},{"id":"https://openalex.org/keywords/phylogenetic-analysis","display_name":"phylogenetic analysis","score":0.8640000224113464},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"comparative genomics","score":0.8949999809265137},{"id":"https://openalex.org/keywords/zoonotic-pathogens","display_name":"zoonotic pathogens","score":0.5400000214576721},{"id":"https://openalex.org/keywords/iberian-peninsula","display_name":"Iberian Peninsula","score":0.8519999980926514},{"id":"https://openalex.org/keywords/france","display_name":"France","score":0.9860000014305115}],"concepts":[{"id":"https://openalex.org/C2780467176","wikidata":"https://www.wikidata.org/wiki/Q1003460","display_name":"Francisella tularensis","level":4,"score":0.8870984315872192},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8010249137878418},{"id":"https://openalex.org/C2775983634","wikidata":"https://www.wikidata.org/wiki/Q153861","display_name":"Tularemia","level":2,"score":0.5827013850212097},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.5789726972579956},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.522271454334259},{"id":"https://openalex.org/C123588078","wikidata":"https://www.wikidata.org/wiki/Q34763","display_name":"Peninsula","level":2,"score":0.487954318523407},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4260181784629822},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3363489508628845},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.2866969108581543},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2394290566444397},{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.13656923174858093},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.11905115842819214}],"mesh":[{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004587","descriptor_name":"Electrophoresis, Agar Gel","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005602","descriptor_name":"France","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005603","descriptor_name":"Francisella","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005603","descriptor_name":"Francisella","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D005604","descriptor_name":"Francisella tularensis","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D005604","descriptor_name":"Francisella tularensis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D005604","descriptor_name":"Francisella tularensis","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D005798","descriptor_name":"Genes, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013030","descriptor_name":"Spain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016133","descriptor_name":"Polymerase Chain Reaction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017353","descriptor_name":"Gene Deletion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1128/aem.00646-07","doi":"https://doi.org/10.1128/aem.00646-07","is_oa":false,"landing_page_url":"https://doi.org/10.1128/aem.00646-07","pdf_url":null,"source":{"id":"https://openalex.org/S158228368","display_name":"Applied and Environmental Microbiology","issn_l":"0099-2240","issn":["0099-2240","1070-6291","1098-5336"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied and Environmental Microbiology","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2168206","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2168206","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Appl Environ Microbiol","raw_type":"Text"},{"id":"pmid:17890329","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17890329","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied and environmental microbiology","raw_type":"Journal Article"},{"id":"pmh:oai:digitalcommons.unl.edu:foodsciefacpub-1174","doi":null,"is_oa":false,"landing_page_url":"https://digitalcommons.unl.edu/foodsciefacpub/174","pdf_url":null,"source":{"id":"https://openalex.org/S4306400577","display_name":"Lincoln (University of Nebraska)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I114395901","host_organization_name":"University of Nebraska\u2013Lincoln","host_organization_lineage":["https://openalex.org/I114395901"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Department of Food Science and Technology: Faculty Publications","raw_type":"text"},{"id":"pmh:oai:buleria.unileon.es:10612/6453","doi":null,"is_oa":false,"landing_page_url":"http://hdl.handle.net/10612/6453","pdf_url":null,"source":{"id":"https://openalex.org/S4306401642","display_name":"Buleria (Universidad de Le\u00f3n)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I169046204","host_organization_name":"Universidad Aut\u00f3noma de Nuevo Le\u00f3n","host_organization_lineage":["https://openalex.org/I169046204"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:2168206","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2168206","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Appl Environ Microbiol","raw_type":"Text"},"sustainable_development_goals":[{"score":0.428600013256073,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1147570439","display_name":"Genome biology of Francisella tularensis populations","funder_award_id":"R21AI057755","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"}],"funders":[{"id":"https://openalex.org/F4320306078","display_name":"U.S. Department of Defense","ror":"https://ror.org/0447fe631"},{"id":"https://openalex.org/F4320306110","display_name":"U.S. Department of Homeland Security","ror":"https://ror.org/00jyr0d86"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332162","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12"},{"id":"https://openalex.org/F4320332467","display_name":"U.S. Air Force","ror":"https://ror.org/006gmme17"},{"id":"https://openalex.org/F4320332815","display_name":"Advanced Research Projects Agency","ror":"https://ror.org/02caytj08"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1558502889","https://openalex.org/W1984159720","https://openalex.org/W2002817781","https://openalex.org/W2005052750","https://openalex.org/W2015316514","https://openalex.org/W2053579883","https://openalex.org/W2057528483","https://openalex.org/W2073867348","https://openalex.org/W2094823810","https://openalex.org/W2102789902","https://openalex.org/W2108023684","https://openalex.org/W2114439994","https://openalex.org/W2114583053","https://openalex.org/W2115369065","https://openalex.org/W2116919210","https://openalex.org/W2124260959","https://openalex.org/W2134828511","https://openalex.org/W2135900836","https://openalex.org/W2140577488","https://openalex.org/W2145693960","https://openalex.org/W2146396346","https://openalex.org/W2146681343","https://openalex.org/W2161306590","https://openalex.org/W2163010678","https://openalex.org/W4211067865"],"related_works":["https://openalex.org/W3010372360","https://openalex.org/W2005212780","https://openalex.org/W2981737862","https://openalex.org/W2027644847","https://openalex.org/W2767886446","https://openalex.org/W7098565035","https://openalex.org/W1603185568","https://openalex.org/W3111666243","https://openalex.org/W4400322334","https://openalex.org/W4403750031"],"abstract_inverted_index":{"Francisella":[0],"tularensis":[1,31],"subsp.":[2,32],"holarctica":[3,33],"is":[4],"widely":[5],"disseminated":[6],"in":[7,76],"North":[8],"America":[9],"and":[10,13,37,78],"the":[11,17,54,79],"boreal":[12],"temperate":[14],"regions":[15],"of":[16,41,61],"Eurasian":[18],"continent.":[19],"Comparative":[20],"genomic":[21,26],"analyses":[22],"identified":[23],"a":[24,57],"1.59-kb":[25],"deletion":[27,45],"specific":[28],"to":[29],"F.":[30],"isolates":[34],"from":[35],"Spain":[36],"France.":[38],"Phylogenetic":[39],"analysis":[40,51],"strains":[42,55,66],"carrying":[43],"this":[44],"by":[46,73],"multiple-locus":[47],"variable-number":[48],"tandem":[49],"repeat":[50],"showed":[52],"that":[53,64],"comprise":[56],"highly":[58],"related":[59],"set":[60],"genotypes,":[62],"implying":[63],"these":[65],"were":[67],"recently":[68,71],"introduced":[69],"or":[70],"emerged":[72],"clonal":[74],"expansion":[75],"France":[77],"Iberian":[80],"Peninsula.":[81]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":3}],"updated_date":"2026-11-06T12:05:46.655746","created_date":"2016-06-24T00:00:00"}