{"id":"https://openalex.org/W2157234841","doi":"https://doi.org/10.1111/j.1439-0469.2006.00384.x","title":"Recent advances in DNA taxonomy","display_name":"Recent advances in DNA taxonomy","publication_year":2006,"publication_date":"2006-11-02","ids":{"openalex":"https://openalex.org/W2157234841","doi":"https://doi.org/10.1111/j.1439-0469.2006.00384.x","mag":"2157234841"},"language":"en","primary_location":{"id":"doi:10.1111/j.1439-0469.2006.00384.x","doi":"https://doi.org/10.1111/j.1439-0469.2006.00384.x","is_oa":false,"landing_page_url":"https://doi.org/10.1111/j.1439-0469.2006.00384.x","pdf_url":null,"source":{"id":"https://openalex.org/S36756304","display_name":"Journal of Zoological Systematics & Evolutionary Research","issn_l":"0947-5745","issn":["0947-5745","1439-0469"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-a","jufo-1","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Zoological Systematics and Evolutionary Research","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061841033","display_name":"Alfried P. Vogler","orcid":"https://orcid.org/0000-0002-2462-3718","observed_orcids":["https://orcid.org/0000-0002-2462-3718"]},"institutions":[{"id":"https://openalex.org/I1336856363","display_name":"Natural History Museum","ror":"https://ror.org/039zvsn29","country_code":"GB","type":"archive","lineage":["https://openalex.org/I1336856363"]},{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"A. P. Vogler","raw_affiliation_strings":["Department of Biology, Imperial College London, Ascot, UK","Department of Entomology, Natural History Museum, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Imperial College London, Ascot, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Department of Entomology, Natural History Museum, London, UK","institution_ids":["https://openalex.org/I1336856363"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064374814","display_name":"Michael T. Monaghan","orcid":"https://orcid.org/0000-0001-6200-2376","observed_orcids":["https://orcid.org/0000-0001-6200-2376"]},"institutions":[{"id":"https://openalex.org/I1336856363","display_name":"Natural History Museum","ror":"https://ror.org/039zvsn29","country_code":"GB","type":"archive","lineage":["https://openalex.org/I1336856363"]},{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"M. T. Monaghan","raw_affiliation_strings":["Department of Biology, Imperial College London, Ascot, UK","Department of Entomology, Natural History Museum, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Imperial College London, Ascot, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Department of Entomology, Natural History Museum, London, UK","institution_ids":["https://openalex.org/I1336856363"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5061841033","https://openalex.org/A5064374814"],"corresponding_institution_ids":["https://openalex.org/I1336856363","https://openalex.org/I47508984"],"apc_list":{"value":2350,"currency":"USD","value_usd":2350},"apc_paid":null,"fwci":17.5019,"has_fulltext":false,"cited_by_count":346,"citation_normalized_percentile":{"value":0.99704746,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":100},"biblio":{"volume":"45","issue":"1","first_page":"1","last_page":"10"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T14399","display_name":"Invertebrate Taxonomy and Ecology","score":0.38040000200271606,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T14399","display_name":"Invertebrate Taxonomy and Ecology","score":0.38040000200271606,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.22910000383853912,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.14920000731945038,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-taxonomy","display_name":"DNA taxonomy","score":0.9990000128746033},{"id":"https://openalex.org/keywords/species-delimitation","display_name":"species delimitation","score":0.9710000157356262},{"id":"https://openalex.org/keywords/dna-barcoding","display_name":"DNA barcoding","score":0.9620000123977661},{"id":"https://openalex.org/keywords/mitochondrial-dna","display_name":"mitochondrial DNA","score":0.921999990940094},{"id":"https://openalex.org/keywords/polyphyly","display_name":"polyphyly","score":0.6800000071525574},{"id":"https://openalex.org/keywords/species-concept","display_name":"species concept","score":0.4860000014305115},{"id":"https://openalex.org/keywords/sequence-similarity","display_name":"sequence similarity","score":0.3970000147819519},{"id":"https://openalex.org/keywords/nuclear-markers","display_name":"nuclear markers","score":0.6320000290870667},{"id":"https://openalex.org/keywords/molecular-phylogeny","display_name":"molecular phylogeny","score":0.5059999823570251},{"id":"https://openalex.org/keywords/sampling-strategy","display_name":"sampling strategy","score":0.4659999907016754},{"id":"https://openalex.org/keywords/taxonomic-systematics","display_name":"taxonomic systematics","score":0.4729999899864197}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8139759302139282},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.6789668798446655},{"id":"https://openalex.org/C141732470","wikidata":"https://www.wikidata.org/wiki/Q1154642","display_name":"DNA barcoding","level":2,"score":0.6181672215461731},{"id":"https://openalex.org/C162100973","wikidata":"https://www.wikidata.org/wiki/Q217743","display_name":"Polyphyly","level":5,"score":0.6112557649612427},{"id":"https://openalex.org/C58642233","wikidata":"https://www.wikidata.org/wiki/Q8269924","display_name":"Taxonomy (biology)","level":2,"score":0.5792670249938965},{"id":"https://openalex.org/C24586158","wikidata":"https://www.wikidata.org/wiki/Q27075","display_name":"Mitochondrial DNA","level":3,"score":0.5225162506103516},{"id":"https://openalex.org/C189592816","wikidata":"https://www.wikidata.org/wiki/Q427626","display_name":"Taxonomic rank","level":3,"score":0.44398626685142517},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.4435935914516449},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.43378984928131104},{"id":"https://openalex.org/C71640776","wikidata":"https://www.wikidata.org/wiki/Q16521","display_name":"Taxon","level":2,"score":0.4279651343822479},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.2500489056110382},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2327340841293335},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.19448819756507874},{"id":"https://openalex.org/C44465124","wikidata":"https://www.wikidata.org/wiki/Q713623","display_name":"Clade","level":4,"score":0.1432359218597412},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1111/j.1439-0469.2006.00384.x","doi":"https://doi.org/10.1111/j.1439-0469.2006.00384.x","is_oa":false,"landing_page_url":"https://doi.org/10.1111/j.1439-0469.2006.00384.x","pdf_url":null,"source":{"id":"https://openalex.org/S36756304","display_name":"Journal of Zoological Systematics & Evolutionary Research","issn_l":"0947-5745","issn":["0947-5745","1439-0469"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-a","jufo-1","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Zoological Systematics and Evolutionary Research","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":92,"referenced_works":["https://openalex.org/W1493529132","https://openalex.org/W1525240758","https://openalex.org/W1531196022","https://openalex.org/W1546828436","https://openalex.org/W1555476426","https://openalex.org/W1571642017","https://openalex.org/W1594426298","https://openalex.org/W1895113995","https://openalex.org/W1963904211","https://openalex.org/W1963946970","https://openalex.org/W1984306711","https://openalex.org/W1986156911","https://openalex.org/W1995824068","https://openalex.org/W2002040394","https://openalex.org/W2002754083","https://openalex.org/W2007225470","https://openalex.org/W2009664200","https://openalex.org/W2012728586","https://openalex.org/W2013155565","https://openalex.org/W2016325533","https://openalex.org/W2016596510","https://openalex.org/W2022144066","https://openalex.org/W2023489584","https://openalex.org/W2026644379","https://openalex.org/W2035739249","https://openalex.org/W2036346930","https://openalex.org/W2037656072","https://openalex.org/W2040452926","https://openalex.org/W2042109354","https://openalex.org/W2045419540","https://openalex.org/W2050421544","https://openalex.org/W2050511288","https://openalex.org/W2058894952","https://openalex.org/W2064673911","https://openalex.org/W2070755074","https://openalex.org/W2076821547","https://openalex.org/W2078379917","https://openalex.org/W2084221226","https://openalex.org/W2085525886","https://openalex.org/W2093016244","https://openalex.org/W2097793126","https://openalex.org/W2097939342","https://openalex.org/W2099901798","https://openalex.org/W2100157930","https://openalex.org/W2100439846","https://openalex.org/W2102883209","https://openalex.org/W2103961200","https://openalex.org/W2107474759","https://openalex.org/W2108675597","https://openalex.org/W2109910335","https://openalex.org/W2112061642","https://openalex.org/W2116104082","https://openalex.org/W2116116608","https://openalex.org/W2116988018","https://openalex.org/W2118079256","https://openalex.org/W2123410777","https://openalex.org/W2123954839","https://openalex.org/W2125613904","https://openalex.org/W2126060359","https://openalex.org/W2127295194","https://openalex.org/W2128675459","https://openalex.org/W2132323289","https://openalex.org/W2134583481","https://openalex.org/W2135817170","https://openalex.org/W2135869163","https://openalex.org/W2138215326","https://openalex.org/W2139269967","https://openalex.org/W2142431124","https://openalex.org/W2143155386","https://openalex.org/W2144623626","https://openalex.org/W2144851902","https://openalex.org/W2144855155","https://openalex.org/W2146934147","https://openalex.org/W2148376910","https://openalex.org/W2148651312","https://openalex.org/W2150922157","https://openalex.org/W2152644728","https://openalex.org/W2160388710","https://openalex.org/W2164747063","https://openalex.org/W2165339928","https://openalex.org/W2166562623","https://openalex.org/W2168105736","https://openalex.org/W2168604840","https://openalex.org/W2168746718","https://openalex.org/W2168864305","https://openalex.org/W2169363274","https://openalex.org/W2169887773","https://openalex.org/W2171405751","https://openalex.org/W2177663752","https://openalex.org/W2188134665","https://openalex.org/W4206506431","https://openalex.org/W4248231884"],"related_works":["https://openalex.org/W2093342527","https://openalex.org/W7100349084","https://openalex.org/W2116116608","https://openalex.org/W2017870120","https://openalex.org/W7096615459","https://openalex.org/W1520448637","https://openalex.org/W7099152623","https://openalex.org/W2298253512","https://openalex.org/W2189124943","https://openalex.org/W4416084141"],"abstract_inverted_index":{"Large-scale":[0],"DNA":[1,33,36,80,170,217,241,292,317,322],"sequencing":[2,235],"of":[3,47,59,87,129,136,144,157,160,169,191,224,236,243,283,316,335],"living":[4],"species":[5,48,51,99,121,139,161,251,268,288,300],"holds":[6],"great":[7],"promise":[8],"in":[9,28,73,78,123,138,205,319,332],"taxonomy,":[10],"but":[11],"has":[12,151],"been":[13,195],"controversial.":[14],"In":[15,213],"this":[16,206],"article,":[17],"we":[18],"review":[19],"the":[20,25,39,43,54,117,134,158,202,225,244,260,284,314],"recent":[21,71],"advances":[22],"that":[23,76,184,306,313],"follow":[24],"dramatic":[26],"increase":[27],"data":[29,180,261,295],"generation.":[30],"We":[31,310],"distinguish":[32],"taxonomy":[34,171,320],"from":[35,70,259],"barcoding,":[37],"where":[38],"former":[40],"directly":[41],"concerns":[42],"circumscription":[44],"and":[45,53,101,141,179,246,266,276,293,338],"delineation":[46],"using":[49],"evolutionary":[50,211,281,336],"concepts":[52],"latter":[55],"is":[56,75,82,329],"a":[57,61,215,240,303],"means":[58],"identifying":[60],"priori":[62],"entities":[63,269],"by":[64,233],"sequence":[65,114,199],"similarity.":[66],"A":[67,127],"key":[68],"finding":[69,109],"studies":[72,132],"animals":[74],"variation":[77,115],"mitochondrial":[79],"(mtDNA)":[81],"partitioned":[83],"as":[84,116],"tight":[85],"clusters":[86],"closely":[88],"related":[89],"genotypes,":[90],"which":[91,102],"group":[92],"specimens":[93],"largely":[94,209],"according":[95],"to":[96,112,147,154,174,298],"traditionally":[97],"recognized":[98],"limits,":[100],"are":[103,185,296],"congruent":[104],"with":[105,162],"nuclear":[106],"markers.":[107],"This":[108],"provides":[110],"confidence":[111],"use":[113,315],"primary":[118],"information":[119],"for":[120,239,249,287],"delimitation":[122],"poorly":[124],"known":[125],"groups.":[126],"number":[128],"recent,":[130],"large-scale":[131,234],"support":[133],"power":[135],"mtDNA":[137,164],"recognition,":[140],"previous":[142],"application":[143],"molecular":[145],"techniques":[146],"taxonomically":[148],"complicated":[149],"cases":[150],"likely":[152],"led":[153],"an":[155,280],"overestimate":[156],"proportion":[159],"polyphyletic":[163],"haplotypes.":[165],"The":[166,253],"continued":[167],"development":[168],"will":[172,220,256,324],"lead":[173],"more":[175],"refined":[176],"sampling":[177,223],"strategies":[178],"analyses":[181],"than":[182,263],"those":[183],"presently":[186],"used.":[187],"Sophisticated":[188],"statistical":[189],"methods":[190],"grouping":[192],"have":[193,208],"already":[194],"developed":[196],"based":[197],"on":[198],"similarity;":[200],"yet,":[201],"units":[203],"defined":[204],"way":[207],"unknown":[210],"relevance.":[212],"future,":[214],"standard":[216],"taxonomic":[218,254],"analysis":[219],"include":[221],"broad":[222],"target":[226],"taxa":[227],"across":[228],"their":[229],"geographic":[230],"range,":[231],"followed":[232],"representative":[237],"samples":[238],"profile":[242],"group,":[245],"algorithmic":[247],"procedures":[248,285],"delineating":[250],"limits.":[252],"system":[255],"be":[257,271],"derived":[258],"rather":[262],"expert":[264],"opinion,":[265],"hypothesized":[267],"can":[270],"tested":[272],"against":[273],"morphology,":[274],"biogeography":[275],"other":[277,294],"data,":[278],"providing":[279],"justification":[282],"used":[286,297],"delimitation.":[289],"Discrepancies":[290],"between":[291],"refine":[299],"delimitations":[301],"via":[302],"feedback":[304],"loop":[305],"incorporates":[307],"new":[308],"data.":[309],"argue,":[311],"however,":[312],"methodology":[318],"(including":[321],"barcoding)":[323],"remain":[325],"controversial":[326],"until":[327],"it":[328],"better":[330],"founded":[331],"existing":[333],"theory":[334],"biology":[337],"phylogenetics.":[339]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":13},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":13},{"year":2021,"cited_by_count":18},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":15},{"year":2018,"cited_by_count":22},{"year":2017,"cited_by_count":15},{"year":2016,"cited_by_count":20},{"year":2015,"cited_by_count":16},{"year":2014,"cited_by_count":22},{"year":2013,"cited_by_count":17},{"year":2012,"cited_by_count":17}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}