{"id":"https://openalex.org/W2153455203","doi":"https://doi.org/10.1111/j.1574-6968.2009.01637.x","title":"Bacterial endophyte-mediated naphthalene phytoprotection and phytoremediation","display_name":"Bacterial endophyte-mediated naphthalene phytoprotection and phytoremediation","publication_year":2009,"publication_date":"2009-04-30","ids":{"openalex":"https://openalex.org/W2153455203","doi":"https://doi.org/10.1111/j.1574-6968.2009.01637.x","mag":"2153455203","pmid":"https://pubmed.ncbi.nlm.nih.gov/19459954"},"language":"en","primary_location":{"id":"doi:10.1111/j.1574-6968.2009.01637.x","doi":"https://doi.org/10.1111/j.1574-6968.2009.01637.x","is_oa":false,"landing_page_url":"https://doi.org/10.1111/j.1574-6968.2009.01637.x","pdf_url":null,"source":{"id":"https://openalex.org/S34954451","display_name":"FEMS Microbiology Letters","issn_l":"0378-1097","issn":["0378-1097","1574-6968"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"FEMS Microbiology Letters","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023456573","display_name":"Kieran J. Germaine","orcid":"https://orcid.org/0000-0003-4026-3414","observed_orcids":["https://orcid.org/0000-0003-4026-3414"]},"institutions":[{"id":"https://openalex.org/I70277191","display_name":"Institute of Technology Carlow","ror":"https://ror.org/02frwys47","country_code":"IE","type":"government","lineage":["https://openalex.org/I4387156359","https://openalex.org/I70277191"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Kieran J. Germaine","raw_affiliation_strings":["Department of Science and Health, Institute of Technology Carlow, Carlow, Ireland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Science and Health, Institute of Technology Carlow, Carlow, Ireland","institution_ids":["https://openalex.org/I70277191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013333642","display_name":"Elaine Keogh","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I70277191","display_name":"Institute of Technology Carlow","ror":"https://ror.org/02frwys47","country_code":"IE","type":"government","lineage":["https://openalex.org/I4387156359","https://openalex.org/I70277191"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Elaine Keogh","raw_affiliation_strings":["Department of Science and Health, Institute of Technology Carlow, Carlow, Ireland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Science and Health, Institute of Technology Carlow, Carlow, Ireland","institution_ids":["https://openalex.org/I70277191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063118598","display_name":"David Ryan","orcid":"https://orcid.org/0000-0002-9655-2373","observed_orcids":["https://orcid.org/0000-0002-9655-2373"]},"institutions":[{"id":"https://openalex.org/I70277191","display_name":"Institute of Technology Carlow","ror":"https://ror.org/02frwys47","country_code":"IE","type":"government","lineage":["https://openalex.org/I4387156359","https://openalex.org/I70277191"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"David Ryan","raw_affiliation_strings":["Department of Science and Health, Institute of Technology Carlow, Carlow, Ireland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Science and Health, Institute of Technology Carlow, Carlow, Ireland","institution_ids":["https://openalex.org/I70277191"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070537079","display_name":"David N. Dowling","orcid":"https://orcid.org/0000-0001-6952-5495","observed_orcids":["https://orcid.org/0000-0001-6952-5495"]},"institutions":[{"id":"https://openalex.org/I70277191","display_name":"Institute of Technology Carlow","ror":"https://ror.org/02frwys47","country_code":"IE","type":"government","lineage":["https://openalex.org/I4387156359","https://openalex.org/I70277191"]}],"countries":["IE"],"is_corresponding":true,"raw_author_name":"David N. Dowling","raw_affiliation_strings":["Department of Science and Health, Institute of Technology Carlow, Carlow, Ireland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Science and Health, Institute of Technology Carlow, Carlow, Ireland","institution_ids":["https://openalex.org/I70277191"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5070537079"],"corresponding_institution_ids":["https://openalex.org/I70277191"],"apc_list":{"value":2500,"currency":"GBP","value_usd":3297},"apc_paid":null,"fwci":6.2912,"has_fulltext":true,"cited_by_count":215,"citation_normalized_percentile":{"value":0.9675723,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"296","issue":"2","first_page":"226","last_page":"234"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10324","display_name":"Microbial bioremediation and biosurfactants","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/2310","display_name":"Pollution"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10324","display_name":"Microbial bioremediation and biosurfactants","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/2310","display_name":"Pollution"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10076","display_name":"Plant-Microbe Interactions and Immunity","score":0.003700000001117587,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12934","display_name":"Plant and fungal interactions","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/naphthalene","display_name":"naphthalene","score":0.906000018119812},{"id":"https://openalex.org/keywords/endophytic-bacteria","display_name":"endophytic bacteria","score":0.9039999842643738},{"id":"https://openalex.org/keywords/phytoremediation","display_name":"phytoremediation","score":0.8949999809265137},{"id":"https://openalex.org/keywords/phytotoxicity","display_name":"phytotoxicity","score":0.8090000152587891},{"id":"https://openalex.org/keywords/pseudomonas-putida","display_name":"Pseudomonas putida","score":0.9100000262260437},{"id":"https://openalex.org/keywords/polycyclic-aromatic-hydrocarbons","display_name":"polycyclic aromatic hydrocarbons","score":0.8939999938011169},{"id":"https://openalex.org/keywords/plant-microbe-symbiosis","display_name":"plant-microbe symbiosis","score":0.6629999876022339},{"id":"https://openalex.org/keywords/rhizosphere-colonization","display_name":"rhizosphere colonization","score":0.8579999804496765},{"id":"https://openalex.org/keywords/naphthalene-degradation","display_name":"naphthalene degradation","score":0.7269999980926514},{"id":"https://openalex.org/keywords/contaminated-soil","display_name":"contaminated soil","score":0.843999981880188},{"id":"https://openalex.org/keywords/seed-germination","display_name":"seed germination","score":0.8429999947547913},{"id":"https://openalex.org/keywords/transpiration","display_name":"transpiration","score":0.9079999923706055}],"concepts":[{"id":"https://openalex.org/C86626682","wikidata":"https://www.wikidata.org/wiki/Q1124578","display_name":"Rhizosphere","level":3,"score":0.8743367791175842},{"id":"https://openalex.org/C63797996","wikidata":"https://www.wikidata.org/wiki/Q283180","display_name":"Phytoremediation","level":3,"score":0.861231803894043},{"id":"https://openalex.org/C2779255514","wikidata":"https://www.wikidata.org/wiki/Q179724","display_name":"Naphthalene","level":2,"score":0.7963379621505737},{"id":"https://openalex.org/C2780543182","wikidata":"https://www.wikidata.org/wiki/Q2738168","display_name":"Pseudomonas putida","level":3,"score":0.7438489198684692},{"id":"https://openalex.org/C100701293","wikidata":"https://www.wikidata.org/wiki/Q193838","display_name":"Germination","level":2,"score":0.6909587383270264},{"id":"https://openalex.org/C180032290","wikidata":"https://www.wikidata.org/wiki/Q1664296","display_name":"Inoculation","level":2,"score":0.6222560405731201},{"id":"https://openalex.org/C2777525088","wikidata":"https://www.wikidata.org/wiki/Q260335","display_name":"Endophyte","level":2,"score":0.5968917012214661},{"id":"https://openalex.org/C82685317","wikidata":"https://www.wikidata.org/wiki/Q19829510","display_name":"Pollutant","level":2,"score":0.5400252342224121},{"id":"https://openalex.org/C2780858201","wikidata":"https://www.wikidata.org/wiki/Q3774857","display_name":"Phytotoxicity","level":2,"score":0.4801330268383026},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.47362324595451355},{"id":"https://openalex.org/C144027150","wikidata":"https://www.wikidata.org/wiki/Q48803","display_name":"Horticulture","level":1,"score":0.44335469603538513},{"id":"https://openalex.org/C65580899","wikidata":"https://www.wikidata.org/wiki/Q212734","display_name":"Soil contamination","level":3,"score":0.4426426291465759},{"id":"https://openalex.org/C2781463711","wikidata":"https://www.wikidata.org/wiki/Q131143","display_name":"Pseudomonas","level":3,"score":0.4149680733680725},{"id":"https://openalex.org/C2778022156","wikidata":"https://www.wikidata.org/wiki/Q576145","display_name":"Strain (injury)","level":2,"score":0.4121795892715454},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.40227699279785156},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3871566355228424},{"id":"https://openalex.org/C112570922","wikidata":"https://www.wikidata.org/wiki/Q60528603","display_name":"Contamination","level":2,"score":0.3464624881744385},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.24912190437316895},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001673","descriptor_name":"Biodegradation, Environmental","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009281","descriptor_name":"Naphthalenes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009281","descriptor_name":"Naphthalenes","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":true},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D011837","descriptor_name":"Radiation-Protective Agents","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011837","descriptor_name":"Radiation-Protective Agents","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D012988","descriptor_name":"Soil Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013559","descriptor_name":"Symbiosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016958","descriptor_name":"Pseudomonas putida","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016958","descriptor_name":"Pseudomonas putida","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1111/j.1574-6968.2009.01637.x","doi":"https://doi.org/10.1111/j.1574-6968.2009.01637.x","is_oa":false,"landing_page_url":"https://doi.org/10.1111/j.1574-6968.2009.01637.x","pdf_url":null,"source":{"id":"https://openalex.org/S34954451","display_name":"FEMS Microbiology Letters","issn_l":"0378-1097","issn":["0378-1097","1574-6968"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"FEMS Microbiology Letters","raw_type":"journal-article"},{"id":"pmid:19459954","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19459954","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"FEMS microbiology letters","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","display_name":"Life on land","score":0.7605999708175659}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320324551","display_name":"Vlaamse Instelling voor Technologisch Onderzoek","ror":"https://ror.org/04gq0w522"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1588978217","https://openalex.org/W1985642357","https://openalex.org/W1989300421","https://openalex.org/W1996760073","https://openalex.org/W1999631720","https://openalex.org/W2008127844","https://openalex.org/W2031358395","https://openalex.org/W2035822223","https://openalex.org/W2038864810","https://openalex.org/W2057668486","https://openalex.org/W2059777008","https://openalex.org/W2085635423","https://openalex.org/W2091701839","https://openalex.org/W2092906064","https://openalex.org/W2095167575","https://openalex.org/W2106959749","https://openalex.org/W2155308155","https://openalex.org/W2490005405","https://openalex.org/W4253486452"],"related_works":["https://openalex.org/W2332867170","https://openalex.org/W2509355989","https://openalex.org/W2049580204","https://openalex.org/W7205771713","https://openalex.org/W2015749255","https://openalex.org/W2100448707","https://openalex.org/W2902484114","https://openalex.org/W2155824705","https://openalex.org/W2155308155","https://openalex.org/W2021955590"],"abstract_inverted_index":{"Polyaromatic":[0],"hydrocarbons":[1],"(PAHs)":[2],"are":[3],"major":[4],"and":[5,11,74,110],"recalcitrant":[6],"pollutants":[7],"of":[8,50,68,80,90,98,118,124],"the":[9,34,48,72,88,91,95,119],"environment":[10],"their":[12],"removal":[13,25],"presents":[14],"a":[15,51],"significant":[16],"problem.":[17],"Phytoremediation":[18],"has":[19],"shown":[20],"much":[21],"promise":[22],"in":[23,87,140],"PAH":[24],"from":[26,39,94],"contaminated":[27,142],"soil,":[28],"but":[29],"may":[30],"be":[31,64],"inhibited":[32],"because":[33],"plant":[35,93,111],"experiences":[36],"phytotoxic":[37,96],"effects":[38,97],"low-molecular-weight":[40],"PAHs":[41],"such":[42],"as":[43],"naphthalene.":[44,99],"This":[45,59],"paper":[46],"describes":[47],"construction":[49],"naphthalene-degrading":[52],"endophytic":[53],"strain":[54,60,128],"designated":[55],"Pseudomonas":[56],"putida":[57,84],"VM1441(pNAH7).":[58],"was":[61],"found":[62],"to":[63,105],"an":[65],"efficient":[66],"colonizer":[67],"plants,":[69],"colonizing":[70],"both":[71,107],"rhizosphere":[73],"interior":[75],"root":[76],"tissues.":[77],"The":[78,122],"inoculation":[79,123],"plants":[81,102,125,139],"with":[82,126,137],"P.":[83],"VM1441(pNAH7)":[85],"resulted":[86],"protection":[89],"host":[92],"When":[100],"inoculated":[101],"were":[103,114],"exposed":[104],"naphthalene,":[106],"seed":[108],"germination":[109],"transpiration":[112],"rates":[113,135],"higher":[115,131],"than":[116],"those":[117],"uninoculated":[120,138],"controls.":[121],"this":[127],"also":[129],"facilitated":[130],"(40%)":[132],"naphthalene":[133],"degradation":[134],"compared":[136],"artificially":[141],"soil.":[143]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":17},{"year":2024,"cited_by_count":12},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":15},{"year":2021,"cited_by_count":10},{"year":2020,"cited_by_count":18},{"year":2019,"cited_by_count":19},{"year":2018,"cited_by_count":11},{"year":2017,"cited_by_count":23},{"year":2016,"cited_by_count":11},{"year":2015,"cited_by_count":15},{"year":2014,"cited_by_count":12},{"year":2013,"cited_by_count":17},{"year":2012,"cited_by_count":9}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2016-06-24T00:00:00"}
