{"id":"https://openalex.org/W2152125853","doi":"https://doi.org/10.3389/fmicb.2013.00320","title":"Adaptation of a simple dipstick test for detection of Vibrio cholerae O1 and O139 in environmental water","display_name":"Adaptation of a simple dipstick test for detection of Vibrio cholerae O1 and O139 in environmental water","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W2152125853","doi":"https://doi.org/10.3389/fmicb.2013.00320","mag":"2152125853","pmid":"https://pubmed.ncbi.nlm.nih.gov/24194737","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/3810590"},"language":"en","primary_location":{"id":"doi:10.3389/fmicb.2013.00320","doi":"https://doi.org/10.3389/fmicb.2013.00320","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fmicb.2013.00320","pdf_url":"https://www.frontiersin.org/articles/10.3389/fmicb.2013.00320/pdf","source":{"id":"https://openalex.org/S2484704948","display_name":"Frontiers in Microbiology","issn_l":"1664-302X","issn":["1664-302X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Microbiology","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/articles/10.3389/fmicb.2013.00320/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101964825","display_name":"Subhra Chakraborty","orcid":"https://orcid.org/0000-0002-6446-0255","observed_orcids":["https://orcid.org/0000-0002-6446-0255","https://orcid.org/0000-0002-9188-6796"]},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Subhra Chakraborty","raw_affiliation_strings":["Department of International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082451988","display_name":"Munirul Alam","orcid":"https://orcid.org/0000-0001-9157-5560","observed_orcids":["https://orcid.org/0000-0001-9157-5560"]},"institutions":[{"id":"https://openalex.org/I205889620","display_name":"International Centre for Diarrhoeal Disease Research","ror":"https://ror.org/04vsvr128","country_code":"BD","type":"facility","lineage":["https://openalex.org/I205889620"]}],"countries":["BD"],"is_corresponding":false,"raw_author_name":"Munirul Alam","raw_affiliation_strings":["International Centre for Diarrhoeal Disease Research, Dhaka, Bangladesh"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Centre for Diarrhoeal Disease Research, Dhaka, Bangladesh","institution_ids":["https://openalex.org/I205889620"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059536537","display_name":"Heather Melissa Scobie","orcid":"https://orcid.org/0000-0002-5448-6275","observed_orcids":["https://orcid.org/0000-0002-5448-6275"]},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Heather M. Scobie","raw_affiliation_strings":["Department of International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041377151","display_name":"David Allen Sack","orcid":"https://orcid.org/0000-0002-9338-5119","observed_orcids":["https://orcid.org/0000-0002-9338-5119"]},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"David A. Sack","raw_affiliation_strings":["Department of International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA","institution_ids":["https://openalex.org/I145311948"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5041377151"],"corresponding_institution_ids":["https://openalex.org/I145311948"],"apc_list":{"value":3150,"currency":"CHF","value_usd":3801},"apc_paid":{"value":3150,"currency":"CHF","value_usd":3801},"fwci":2.3674,"has_fulltext":true,"cited_by_count":25,"citation_normalized_percentile":{"value":0.871707,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"4","issue":null,"first_page":"320","last_page":"320"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11684","display_name":"Vibrio bacteria research studies","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11684","display_name":"Vibrio bacteria research studies","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11393","display_name":"Biosensors and Analytical Detection","score":0.0034000000450760126,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1308","display_name":"Clinical Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/vibrio-cholerae","display_name":"Vibrio cholerae","score":0.9079999923706055},{"id":"https://openalex.org/keywords/vibrio-cholerae-o1","display_name":"Vibrio cholerae O1","score":0.9169999957084656},{"id":"https://openalex.org/keywords/vibrio-cholerae-o139","display_name":"Vibrio cholerae O139","score":1.0},{"id":"https://openalex.org/keywords/dipstick-test","display_name":"dipstick test","score":0.9710000157356262},{"id":"https://openalex.org/keywords/rapid-diagnostic-tests","display_name":"rapid diagnostic tests","score":0.9190000295639038},{"id":"https://openalex.org/keywords/environmental-water","display_name":"environmental water","score":0.9679999947547913},{"id":"https://openalex.org/keywords/cholera-epidemiology","display_name":"cholera epidemiology","score":0.7120000123977661},{"id":"https://openalex.org/keywords/sensitivity-and-specificity","display_name":"sensitivity and specificity","score":0.7089999914169312},{"id":"https://openalex.org/keywords/real-world-deployment","display_name":"field deployment","score":0.43799999356269836}],"concepts":[{"id":"https://openalex.org/C2778643871","wikidata":"https://www.wikidata.org/wiki/Q160821","display_name":"Vibrio cholerae","level":3,"score":0.9611337780952454},{"id":"https://openalex.org/C2780327821","wikidata":"https://www.wikidata.org/wiki/Q11089636","display_name":"Dipstick","level":3,"score":0.9507269859313965},{"id":"https://openalex.org/C2780722889","wikidata":"https://www.wikidata.org/wiki/Q12090","display_name":"Cholera","level":2,"score":0.5622109770774841},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.47108399868011475},{"id":"https://openalex.org/C39432304","wikidata":"https://www.wikidata.org/wiki/Q188847","display_name":"Environmental science","level":0,"score":0.3670218884944916},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3456885516643524},{"id":"https://openalex.org/C107872376","wikidata":"https://www.wikidata.org/wiki/Q321355","display_name":"Environmental chemistry","level":1,"score":0.32077351212501526},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.27406781911849976},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.23778954148292542},{"id":"https://openalex.org/C2780026642","wikidata":"https://www.wikidata.org/wiki/Q40924","display_name":"Urine","level":2,"score":0.08817899227142334},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[],"locations_count":7,"locations":[{"id":"doi:10.3389/fmicb.2013.00320","doi":"https://doi.org/10.3389/fmicb.2013.00320","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fmicb.2013.00320","pdf_url":"https://www.frontiersin.org/articles/10.3389/fmicb.2013.00320/pdf","source":{"id":"https://openalex.org/S2484704948","display_name":"Frontiers in Microbiology","issn_l":"1664-302X","issn":["1664-302X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Microbiology","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:2806458","doi":null,"is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC3810590","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3810590","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3810590","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Front Microbiol","raw_type":"Text"},{"id":"pmid:24194737","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24194737","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in microbiology","raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:6715375b83fb41a68939953329f69f6e","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/6715375b83fb41a68939953329f69f6e","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Microbiology, Vol 4 (2013)","raw_type":"article"},{"id":"doi:10.60692/cctez-bcp18","doi":"https://doi.org/10.60692/cctez-bcp18","is_oa":true,"landing_page_url":"https://doi.org/10.60692/cctez-bcp18","pdf_url":null,"source":{"id":"https://openalex.org/S7407051682","display_name":"Greater South Information System","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"},{"id":"doi:10.60692/kp9m5-vyw97","doi":"https://doi.org/10.60692/kp9m5-vyw97","is_oa":true,"landing_page_url":"https://doi.org/10.60692/kp9m5-vyw97","pdf_url":null,"source":{"id":"https://openalex.org/S7407051682","display_name":"Greater South Information System","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.3389/fmicb.2013.00320","doi":"https://doi.org/10.3389/fmicb.2013.00320","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fmicb.2013.00320","pdf_url":"https://www.frontiersin.org/articles/10.3389/fmicb.2013.00320/pdf","source":{"id":"https://openalex.org/S2484704948","display_name":"Frontiers in Microbiology","issn_l":"1664-302X","issn":["1664-302X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Microbiology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Clean water and sanitation","score":0.8999999761581421,"id":"https://metadata.un.org/sdg/6"},{"display_name":"Good health and well-being","score":0.766700029373169,"id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G3417365492","display_name":"Epidemiology and Ecology of Vibrio cholerae in Bangladesh","funder_award_id":"R01AI039129","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"}],"funders":[{"id":"https://openalex.org/F4320306137","display_name":"Bill and Melinda Gates Foundation","ror":"https://ror.org/0456r8d26"},{"id":"https://openalex.org/F4320310145","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95"},{"id":"https://openalex.org/F4320325581","display_name":"International Centre for Diarrhoeal Disease Research, Bangladesh","ror":"https://ror.org/04vsvr128"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2152125853.pdf","grobid_xml":"https://content.openalex.org/works/W2152125853.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W1606750991","https://openalex.org/W1817474180","https://openalex.org/W1833658662","https://openalex.org/W1901842060","https://openalex.org/W1920331751","https://openalex.org/W1996826903","https://openalex.org/W2013566038","https://openalex.org/W2027692380","https://openalex.org/W2037720193","https://openalex.org/W2053707938","https://openalex.org/W2108510242","https://openalex.org/W2111409242","https://openalex.org/W2112719767","https://openalex.org/W2120984677","https://openalex.org/W2133556766","https://openalex.org/W2145915097","https://openalex.org/W2147461226","https://openalex.org/W2152161097"],"related_works":["https://openalex.org/W7095230061","https://openalex.org/W1575579950","https://openalex.org/W2152161097","https://openalex.org/W2133556766","https://openalex.org/W2792109418","https://openalex.org/W2537748391","https://openalex.org/W2135452030","https://openalex.org/W2158296339","https://openalex.org/W1988446265","https://openalex.org/W2768642976"],"abstract_inverted_index":{"The":[0,16],"presence":[1],"of":[2,14,22,58],"Vibrio":[3],"cholerae":[4,24,55,70],"in":[5,56,78,91],"the":[6,12,110,117],"environment":[7],"is":[8,27,41],"key":[9],"to":[10,67,115],"understanding":[11],"epidemiology":[13],"cholera.":[15],"gold":[17],"standard":[18],"for":[19,52,95],"laboratory":[20,34],"confirmation":[21],"V.":[23,54,69],"from":[25,74],"water":[26,76,87,94],"a":[28,64],"culture":[29],"method,":[30],"but":[31],"this":[32],"requires":[33],"infrastructure.":[35],"A":[36],"rapid":[37],"diagnostic":[38],"test":[39,66,118],"that":[40],"simple,":[42],"inexpensive,":[43],"and":[44,72,81,122],"can":[45],"be":[46,50,107],"deployed":[47],"widely":[48],"would":[49],"useful":[51],"confirming":[53],"samples":[57,77,80,88,101],"environmental":[59,75,86,126],"water.":[60],"Here,":[61],"we":[62],"evaluated":[63],"dipstick":[65,111],"detect":[68],"O1":[71],"O139":[73],"spiked":[79,102],"under":[82],"field":[83],"conditions.":[84],"When":[85,113],"were":[89],"incubated":[90],"alkaline":[92],"peptone":[93],"24":[96],"h":[97],"at":[98],"room":[99],"temperature,":[100],"with":[103,125],"<10":[104],"CFU":[105],"could":[106],"detected":[108],"using":[109],"test.":[112],"compared":[114],"culture,":[116],"was":[119],"89%":[120],"sensitive":[121],"100%":[123],"specific":[124],"samples.":[127]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2}],"updated_date":"2026-10-30T12:39:25.321706","created_date":"2016-06-24T00:00:00"}