{"id":"https://openalex.org/W2148296398","doi":"https://doi.org/10.1186/gb-2005-6-11-r93","title":"Transcriptome analysis of antigenic variation in Plasmodium falciparum - var silencing is not dependent on antisense RNA","display_name":"Transcriptome analysis of antigenic variation in Plasmodium falciparum - var silencing is not dependent on antisense RNA","publication_year":2005,"publication_date":"2005-10-31","ids":{"openalex":"https://openalex.org/W2148296398","doi":"https://doi.org/10.1186/gb-2005-6-11-r93","mag":"2148296398","pmid":"https://pubmed.ncbi.nlm.nih.gov/16277748","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/1297649"},"language":"en","primary_location":{"id":"doi:10.1186/gb-2005-6-11-r93","doi":"https://doi.org/10.1186/gb-2005-6-11-r93","is_oa":true,"landing_page_url":"https://doi.org/10.1186/gb-2005-6-11-r93","pdf_url":"https://genomebiology.biomedcentral.com/counter/pdf/10.1186/gb-2005-6-11-r93","source":{"id":"https://openalex.org/S81160022","display_name":"Genome biology","issn_l":"1465-6906","issn":["1465-6906","1465-6914","1474-7596","1474-760X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://genomebiology.biomedcentral.com/counter/pdf/10.1186/gb-2005-6-11-r93","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074946484","display_name":"Stuart A. Ralph","orcid":"https://orcid.org/0000-0003-0114-7808","observed_orcids":["https://orcid.org/0000-0003-0114-7808"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I4387153587","display_name":"Biologie des interactions h\u00f4te-parasite","ror":"https://ror.org/05akjb009","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I157536573","https://openalex.org/I4387153587"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Stuart A Ralph","raw_affiliation_strings":["Institut Pasteur, Centre National de la Recherche Scientifique, Unit\u00e9 de Recherche Associ\u00e9e 2581, F-75724 Paris Cedex 15, France. sralph@pasteur.fr","Institut Pasteur, Unit of Biology of Host-Parasite Interactions, Centre National de la Recherche Scientifique, Unit\u00e9 de Recherche Associ\u00e9e 2581, 25 Rue du Docteur Roux, F-75724, Paris Cedex 15, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Pasteur, Centre National de la Recherche Scientifique, Unit\u00e9 de Recherche Associ\u00e9e 2581, F-75724 Paris Cedex 15, France. sralph@pasteur.fr","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I157536573"]},{"raw_affiliation_string":"Institut Pasteur, Unit of Biology of Host-Parasite Interactions, Centre National de la Recherche Scientifique, Unit\u00e9 de Recherche Associ\u00e9e 2581, 25 Rue du Docteur Roux, F-75724, Paris Cedex 15, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I157536573","https://openalex.org/I4387153587"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018861599","display_name":"Emmanuel Bischoff","orcid":"https://orcid.org/0000-0003-4655-4247","observed_orcids":["https://orcid.org/0000-0003-4655-4247"]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Emmanuel Bischoff","raw_affiliation_strings":["Institut Pasteur, Plate-Forme 2 - Puces \u00e0 ADN, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Pasteur, Plate-Forme 2 - Puces \u00e0 ADN, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070125689","display_name":"Denise Mattei","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I4387153587","display_name":"Biologie des interactions h\u00f4te-parasite","ror":"https://ror.org/05akjb009","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I157536573","https://openalex.org/I4387153587"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Denise Mattei","raw_affiliation_strings":["Institut Pasteur, Unit of Biology of Host-Parasite Interactions, Centre National de la Recherche Scientifique, Unit\u00e9 de Recherche Associ\u00e9e 2581, 25 Rue du Docteur Roux, F-75724, Paris Cedex 15, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Pasteur, Unit of Biology of Host-Parasite Interactions, Centre National de la Recherche Scientifique, Unit\u00e9 de Recherche Associ\u00e9e 2581, 25 Rue du Docteur Roux, F-75724, Paris Cedex 15, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I157536573","https://openalex.org/I4387153587"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039866388","display_name":"Odile Sismeiro","orcid":"https://orcid.org/0000-0003-4113-4606","observed_orcids":["https://orcid.org/0000-0003-4113-4606"]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Odile Sismeiro","raw_affiliation_strings":["Institut Pasteur, Plate-Forme 2 - Puces \u00e0 ADN, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Pasteur, Plate-Forme 2 - Puces \u00e0 ADN, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078354187","display_name":"Marie\u2010Agn\u00e8s Dillies","orcid":"https://orcid.org/0000-0001-9487-2624","observed_orcids":["https://orcid.org/0000-0001-9487-2624"]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marie-Agn\u00e8s Dillies","raw_affiliation_strings":["Institut Pasteur, Plate-Forme 2 - Puces \u00e0 ADN, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Pasteur, Plate-Forme 2 - Puces \u00e0 ADN, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039098033","display_name":"Ghislaine Guigon","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ghislaine Guigon","raw_affiliation_strings":["Institut Pasteur, Plate-Forme 2 - Puces \u00e0 ADN, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France","Institut Pasteur, Plate-Forme 8 - CNR/Sant\u00e9 Publique, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Pasteur, Plate-Forme 2 - Puces \u00e0 ADN, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France","institution_ids":["https://openalex.org/I157536573"]},{"raw_affiliation_string":"Institut Pasteur, Plate-Forme 8 - CNR/Sant\u00e9 Publique, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010453739","display_name":"Jean\u2010Yves Copp\u00e9e","orcid":"https://orcid.org/0000-0001-7747-5731","observed_orcids":["https://orcid.org/0000-0001-7747-5731"]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean-Yves Coppee","raw_affiliation_strings":["Institut Pasteur, Plate-Forme 2 - Puces \u00e0 ADN, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Pasteur, Plate-Forme 2 - Puces \u00e0 ADN, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109106129","display_name":"Peter H. David","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Peter H David","raw_affiliation_strings":["Institut Pasteur, Unit\u00e9 d'Immunologie Mol\u00e9culaire des Parasites, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Pasteur, Unit\u00e9 d'Immunologie Mol\u00e9culaire des Parasites, 28 Rue du Docteur Roux, F-75724, Paris Cedex 15, France","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059545052","display_name":"Artur Scherf","orcid":"https://orcid.org/0000-0003-2411-3328","observed_orcids":["https://orcid.org/0000-0003-2411-3328"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I4387153587","display_name":"Biologie des interactions h\u00f4te-parasite","ror":"https://ror.org/05akjb009","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I157536573","https://openalex.org/I4387153587"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Artur Scherf","raw_affiliation_strings":["Institut Pasteur, Unit of Biology of Host-Parasite Interactions, Centre National de la Recherche Scientifique, Unit\u00e9 de Recherche Associ\u00e9e 2581, 25 Rue du Docteur Roux, F-75724, Paris Cedex 15, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Pasteur, Unit of Biology of Host-Parasite Interactions, Centre National de la Recherche Scientifique, Unit\u00e9 de Recherche Associ\u00e9e 2581, 25 Rue du Docteur Roux, F-75724, Paris Cedex 15, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I157536573","https://openalex.org/I4387153587"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5059545052"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I157536573","https://openalex.org/I4387153587"],"apc_list":{"value":5490,"currency":"USD","value_usd":5490},"apc_paid":{"value":5490,"currency":"USD","value_usd":5490},"fwci":10.3237,"has_fulltext":true,"cited_by_count":69,"citation_normalized_percentile":{"value":0.98395123,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":87,"max":98},"biblio":{"volume":"6","issue":"11","first_page":"R93","last_page":"R93"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10091","display_name":"Malaria Research and Control","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10091","display_name":"Malaria Research and Control","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10554","display_name":"Hemoglobinopathies and Related Disorders","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/2716","display_name":"Genetics (clinical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/plasmodium-falciparum","display_name":"Plasmodium falciparum","score":0.9950000047683716},{"id":"https://openalex.org/keywords/antigenic-variation","display_name":"antigenic variation","score":0.9419999718666077},{"id":"https://openalex.org/keywords/pfemp1","display_name":"PfEMP1","score":0.9190000295639038},{"id":"https://openalex.org/keywords/var-gene-family","display_name":"var gene family","score":0.6779999732971191},{"id":"https://openalex.org/keywords/antisense-rna","display_name":"antisense RNA","score":0.890999972820282},{"id":"https://openalex.org/keywords/transcriptional-gene-silencing","display_name":"transcriptional silencing","score":0.7250000238418579},{"id":"https://openalex.org/keywords/var2csa","display_name":"VAR2CSA","score":0.8479999899864197},{"id":"https://openalex.org/keywords/transcriptome","display_name":"transcriptome","score":0.46000000834465027}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.92475825548172},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.6796896457672119},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6255835294723511},{"id":"https://openalex.org/C191942190","wikidata":"https://www.wikidata.org/wiki/Q4774739","display_name":"Antigenic variation","level":3,"score":0.6094424724578857},{"id":"https://openalex.org/C2778371730","wikidata":"https://www.wikidata.org/wiki/Q311383","display_name":"Plasmodium falciparum","level":3,"score":0.5979951620101929},{"id":"https://openalex.org/C47042493","wikidata":"https://www.wikidata.org/wiki/Q265799","display_name":"Human genetics","level":3,"score":0.5807428956031799},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.497193843126297},{"id":"https://openalex.org/C202416437","wikidata":"https://www.wikidata.org/wiki/Q423832","display_name":"Antisense RNA","level":4,"score":0.49430370330810547},{"id":"https://openalex.org/C119056186","wikidata":"https://www.wikidata.org/wiki/Q1431332","display_name":"Gene silencing","level":3,"score":0.472934752702713},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.43612831830978394},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3736448287963867},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.3252699375152588},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.31286370754241943},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.18461325764656067},{"id":"https://openalex.org/C2778048844","wikidata":"https://www.wikidata.org/wiki/Q12156","display_name":"Malaria","level":2,"score":0.17997458577156067},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.06453803181648254}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000940","descriptor_name":"Antigenic Variation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000940","descriptor_name":"Antigenic Variation","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010963","descriptor_name":"Plasmodium falciparum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016053","descriptor_name":"RNA, Protozoan","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016053","descriptor_name":"RNA, Protozoan","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D016372","descriptor_name":"RNA, Antisense","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D017125","descriptor_name":"Genes, Protozoan","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020868","descriptor_name":"Gene Silencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1186/gb-2005-6-11-r93","doi":"https://doi.org/10.1186/gb-2005-6-11-r93","is_oa":true,"landing_page_url":"https://doi.org/10.1186/gb-2005-6-11-r93","pdf_url":"https://genomebiology.biomedcentral.com/counter/pdf/10.1186/gb-2005-6-11-r93","source":{"id":"https://openalex.org/S81160022","display_name":"Genome biology","issn_l":"1465-6906","issn":["1465-6906","1465-6914","1474-7596","1474-760X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biology","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:97875","doi":null,"is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1297649","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"Text"},{"id":"pmid:16277748","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16277748","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome biology","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:1297649","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC1297649/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biol","raw_type":"Text"},{"id":"pmh:oai:jupiter.its.unimelb.edu.au:11343/212355","doi":null,"is_oa":true,"landing_page_url":"https://hdl.handle.net/11343/212355","pdf_url":"http://hdl.handle.net/11343/212355","source":{"id":"https://openalex.org/S4377196259","display_name":"Minerva Access (University of Melbourne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I165779595","host_organization_name":"The University of Melbourne","host_organization_lineage":["https://openalex.org/I165779595"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.276.4746","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.276.4746","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/6a/93/Genome_Biol_2005_Oct_31_6(11)_R93.tar.gz","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1186/gb-2005-6-11-r93","doi":"https://doi.org/10.1186/gb-2005-6-11-r93","is_oa":true,"landing_page_url":"https://doi.org/10.1186/gb-2005-6-11-r93","pdf_url":"https://genomebiology.biomedcentral.com/counter/pdf/10.1186/gb-2005-6-11-r93","source":{"id":"https://openalex.org/S81160022","display_name":"Genome biology","issn_l":"1465-6906","issn":["1465-6906","1465-6914","1474-7596","1474-760X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.6240000128746033,"display_name":"Good health and well-being"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G271017525","display_name":"Antigenic variation in Plasmodium falciparum","funder_award_id":"251775","funder_id":"https://openalex.org/F4320334705","funder_display_name":"National Health and Medical Research Council"},{"id":"https://openalex.org/G5414145481","display_name":null,"funder_award_id":"22120/DSP/SREAF","funder_id":"https://openalex.org/F4320323495","funder_display_name":"D\u00e9l\u00e9gation G\u00e9n\u00e9rale pour l'Armement"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320320766","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302"},{"id":"https://openalex.org/F4320323495","display_name":"D\u00e9l\u00e9gation G\u00e9n\u00e9rale pour l'Armement","ror":"https://ror.org/025er3q23"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"},{"id":"https://openalex.org/F4320334705","display_name":"National Health and Medical Research Council","ror":"https://ror.org/011kf5r70"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2148296398.pdf","grobid_xml":"https://content.openalex.org/works/W2148296398.grobid-xml"},"referenced_works_count":60,"referenced_works":["https://openalex.org/W13668240","https://openalex.org/W1508943658","https://openalex.org/W1631242416","https://openalex.org/W1679367724","https://openalex.org/W1813231790","https://openalex.org/W1934195635","https://openalex.org/W1964034509","https://openalex.org/W1969503178","https://openalex.org/W1972358210","https://openalex.org/W1973541716","https://openalex.org/W1974548209","https://openalex.org/W1975685743","https://openalex.org/W1979232987","https://openalex.org/W1983405312","https://openalex.org/W1983970357","https://openalex.org/W1985794196","https://openalex.org/W1989143247","https://openalex.org/W1995803714","https://openalex.org/W2007639824","https://openalex.org/W2008145548","https://openalex.org/W2009052964","https://openalex.org/W2010547972","https://openalex.org/W2011326960","https://openalex.org/W2015300437","https://openalex.org/W2021513307","https://openalex.org/W2029913415","https://openalex.org/W2030180692","https://openalex.org/W2030305967","https://openalex.org/W2037042354","https://openalex.org/W2049700891","https://openalex.org/W2051934698","https://openalex.org/W2052523483","https://openalex.org/W2053833990","https://openalex.org/W2056385746","https://openalex.org/W2060329051","https://openalex.org/W2063840682","https://openalex.org/W2076945323","https://openalex.org/W2079205571","https://openalex.org/W2083720282","https://openalex.org/W2089049577","https://openalex.org/W2092116492","https://openalex.org/W2100099370","https://openalex.org/W2100457133","https://openalex.org/W2100668965","https://openalex.org/W2104276561","https://openalex.org/W2105907567","https://openalex.org/W2106799531","https://openalex.org/W2107646820","https://openalex.org/W2110368176","https://openalex.org/W2112047656","https://openalex.org/W2118663519","https://openalex.org/W2128953113","https://openalex.org/W2132285289","https://openalex.org/W2139449809","https://openalex.org/W2147080620","https://openalex.org/W2147170044","https://openalex.org/W2155425270","https://openalex.org/W2160697532","https://openalex.org/W2164365774","https://openalex.org/W2411533701"],"related_works":["https://openalex.org/W2144544563","https://openalex.org/W2085150803","https://openalex.org/W2058631304","https://openalex.org/W1976252707","https://openalex.org/W2078863573","https://openalex.org/W2133690940","https://openalex.org/W1561631506","https://openalex.org/W1984706703","https://openalex.org/W2089049577","https://openalex.org/W7100234321"],"abstract_inverted_index":{"BACKGROUND:":[0],"Plasmodium":[1,34],"falciparum,":[2],"the":[3,7,25,54,119,127,165],"causative":[4],"agent":[5],"of":[6,11,19,22,27,73,81,118,140,168,172,184,198,208,215,221,241,246,255],"most":[8],"severe":[9],"form":[10],"malaria,":[12],"undergoes":[13],"antigenic":[14],"variation":[15],"through":[16],"successive":[17],"presentation":[18],"a":[20,45,78,138,169,234],"family":[21],"antigens":[23],"on":[24,238],"surface":[26],"parasitized":[28],"erythrocytes.":[29],"These":[30],"antigens,":[31],"known":[32,115],"as":[33,129,131,158],"falciparum":[35],"erythrocyte":[36],"membrane":[37],"protein":[38],"1":[39],"(PfEMP1)":[40],"proteins,":[41],"are":[42,51,64,230],"subject":[43],"to":[44,86,93,103,113,126,148,258],"mutually":[46],"exclusive":[47,206],"expression":[48,207],"system,":[49],"and":[50,124,134,181,201,224],"encoded":[52],"by":[53,91],"multigene":[55],"var":[56,62,89,116,141,152,174,185,192,217,228,243,247,259],"family.":[57],"The":[58,219],"mechanism":[59,236],"whereby":[60],"inactive":[61,242],"genes":[63,90,186,193,256],"silenced":[65],"is":[66,249],"poorly":[67],"understood.":[68],"To":[69],"investigate":[70],"transcriptional":[71,213],"features":[72],"this":[74],"mechanism,":[75],"we":[76],"conducted":[77],"microarray":[79],"analysis":[80],"parasites":[82,144],"that":[83],"were":[84,122,159],"selected":[85,145],"express":[87],"different":[88],"adhesion":[92,147],"chondroitin":[94],"sulfate":[95],"A":[96],"(CSA)":[97],"or":[98],"CD36.":[99],"RESULTS:":[100],"In":[101,143],"addition":[102],"oligonucleotides":[104],"for":[105,137,146],"all":[106],"predicted":[107],"protein-coding":[108],"genes,":[109],"oligonucleotide":[110],"probes":[111,136],"specific":[112],"each":[114],"gene":[117,153],"FCR3":[120],"background":[121],"designed":[123],"added":[125],"microarray,":[128],"well":[130],"tiled":[132],"sense":[133,160,180,202,223],"antisense":[135,182,200,225,239],"subset":[139,171],"genes.":[142,175,218,244],"CSA,":[149],"one":[150],"full-length":[151],"(var2csa)":[154],"was":[155,187],"strongly":[156],"upregulated,":[157],"RNA":[161,226],"molecules":[162],"emanating":[163],"from":[164,212],"3'":[166],"end":[167],"limited":[170],"other":[173],"No":[176],"global":[177],"relationship":[178],"between":[179],"production":[183],"observed,":[188],"but":[189],"notably,":[190],"some":[191],"had":[194],"coincident":[195],"high":[196],"levels":[197],"both":[199],"transcript.":[203],"CONCLUSION:":[204],"Mutually":[205],"PfEMP1":[209],"proteins":[210],"results":[211],"silencing":[214,235,240],"non-expressed":[216],"distribution":[220],"steady-state":[222],"at":[227],"loci":[229,248],"not":[231],"consistent":[232],"with":[233,252],"based":[237],"Silencing":[245],"also":[250],"associated":[251],"altered":[253],"regulation":[254],"distal":[257],"loci.":[260]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":3}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2016-06-24T00:00:00"}
