{"id":"https://openalex.org/W2146259666","doi":null,"title":"Image Registration for Prostate MR Spectroscopy Using Biomechanical Modeling and Optimization of Force and Stiffness Parameters","display_name":"Image Registration for Prostate MR Spectroscopy Using Biomechanical Modeling and Optimization of Force and Stiffness Parameters","publication_year":2004,"publication_date":"2004-01-01","ids":{"openalex":"https://openalex.org/W2146259666","mag":"2146259666"},"language":"en","primary_location":{"id":"pmh:oai:CiteSeerX.psu:10.1.1.69.559","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.69.559","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.ieor.berkeley.edu/~ron/research/papers/Alterovitz2004_EMBS.pdf","raw_type":"text"},"volume":null,"type":"article","indexed_in":[],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054402635","display_name":"Ron Alterovitz","orcid":"https://orcid.org/0000-0002-4492-1384","observed_orcids":["https://orcid.org/0000-0002-4492-1384"]},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ron Alterovitz","raw_affiliation_strings":["University of California at Berkeley"],"raw_orcid":"https://orcid.org/0000-0002-4492-1384","affiliations":[{"raw_affiliation_string":"University of California at Berkeley","institution_ids":["https://openalex.org/I95457486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010019244","display_name":"Ken Goldberg","orcid":"https://orcid.org/0000-0001-6747-9499","observed_orcids":["https://orcid.org/0000-0001-6747-9499"]},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ken Goldberg","raw_affiliation_strings":["University of California at Berkeley"],"raw_orcid":"https://orcid.org/0000-0001-6747-9499","affiliations":[{"raw_affiliation_string":"University of California at Berkeley","institution_ids":["https://openalex.org/I95457486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026884047","display_name":"John V. Kurhanewicz","orcid":"https://orcid.org/0000-0002-3544-5339","observed_orcids":["https://orcid.org/0000-0002-3544-5339"]},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John Kurhanewicz","raw_affiliation_strings":["University of California at San Francisco,"],"raw_orcid":"https://orcid.org/0000-0002-3544-5339","affiliations":[{"raw_affiliation_string":"University of California at San Francisco,","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113617016","display_name":"Jean Pouliot","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jean Pouliot","raw_affiliation_strings":["University of California at San Francisco,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California at San Francisco,","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042728664","display_name":"I-Chow Joe Hsu","orcid":"https://orcid.org/0000-0002-3113-121X","observed_orcids":["https://orcid.org/0000-0002-3113-121X"]},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"I\u2010Chow Hsu","raw_affiliation_strings":["University of California at San Francisco,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California at San Francisco,","institution_ids":["https://openalex.org/I180670191"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.6188,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.87316438,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"1722","last_page":"1725"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9814000129699707,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9814000129699707,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10358","display_name":"Advanced Radiotherapy Techniques","score":0.01679999940097332,"subfield":{"id":"https://openalex.org/subfields/3108","display_name":"Radiation"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10124","display_name":"Prostate Cancer Diagnosis and Treatment","score":0.0007999999797903001,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/prostate-cancer","display_name":"prostate cancer","score":0.6650000214576721},{"id":"https://openalex.org/keywords/image-registration","display_name":"image registration","score":0.8330000042915344},{"id":"https://openalex.org/keywords/prostate-deformation","display_name":"prostate deformation","score":0.5540000200271606},{"id":"https://openalex.org/keywords/biomechanical-modeling","display_name":"biomechanical modeling","score":0.902999997138977},{"id":"https://openalex.org/keywords/finite-element-model","display_name":"finite element model","score":0.9879999756813049},{"id":"https://openalex.org/keywords/brachytherapy-treatment-planning","display_name":"brachytherapy treatment planning","score":0.8600000143051147},{"id":"https://openalex.org/keywords/tissue-stiffness","display_name":"tissue stiffness","score":0.5960000157356262},{"id":"https://openalex.org/keywords/external-force-estimation","display_name":"external force estimation","score":0.6190000176429749},{"id":"https://openalex.org/keywords/hdr-brachytherapy","display_name":"high-dose-rate brachytherapy","score":0.7049999833106995},{"id":"https://openalex.org/keywords/tumor-localization","display_name":"tumor localization","score":0.38600000739097595},{"id":"https://openalex.org/keywords/image-warping","display_name":"image warping","score":0.5009999871253967}],"concepts":[{"id":"https://openalex.org/C2776235491","wikidata":"https://www.wikidata.org/wiki/Q9625","display_name":"Prostate","level":3,"score":0.6663047075271606},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.6191474795341492},{"id":"https://openalex.org/C2777416452","wikidata":"https://www.wikidata.org/wiki/Q896687","display_name":"Brachytherapy","level":3,"score":0.5992403030395508},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.5765168070793152},{"id":"https://openalex.org/C2778648096","wikidata":"https://www.wikidata.org/wiki/Q17009878","display_name":"Prostate brachytherapy","level":4,"score":0.5174208879470825},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4858817458152771},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.44151052832603455},{"id":"https://openalex.org/C201645570","wikidata":"https://www.wikidata.org/wiki/Q830637","display_name":"Radiation treatment planning","level":3,"score":0.42381781339645386},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41687989234924316},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.41146740317344666},{"id":"https://openalex.org/C2989005","wikidata":"https://www.wikidata.org/wiki/Q214963","display_name":"Nuclear medicine","level":1,"score":0.4107089638710022},{"id":"https://openalex.org/C136229726","wikidata":"https://www.wikidata.org/wiki/Q327092","display_name":"Biomedical engineering","level":1,"score":0.40314868092536926},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.2922336161136627},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.28580760955810547},{"id":"https://openalex.org/C509974204","wikidata":"https://www.wikidata.org/wiki/Q180507","display_name":"Radiation therapy","level":2,"score":0.2611076831817627},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.21856334805488586},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.08351650834083557},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:CiteSeerX.psu:10.1.1.69.559","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.69.559","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.ieor.berkeley.edu/~ron/research/papers/Alterovitz2004_EMBS.pdf","raw_type":"text"},{"id":"mag:2146259666","doi":null,"is_oa":false,"landing_page_url":"http://ieeexplore.ieee.org/iel5/9639/30462/01403517.pdf","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.9391000270843506}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":10,"referenced_works":["https://openalex.org/W1575826966","https://openalex.org/W1987869189","https://openalex.org/W2052381478","https://openalex.org/W2071027495","https://openalex.org/W2109911863","https://openalex.org/W2111968429","https://openalex.org/W2119973007","https://openalex.org/W2122995970","https://openalex.org/W2160336506","https://openalex.org/W2787523326"],"related_works":["https://openalex.org/W2545716216","https://openalex.org/W2143808155","https://openalex.org/W2111968429","https://openalex.org/W2148341351","https://openalex.org/W2050043874","https://openalex.org/W2054119170","https://openalex.org/W2107565442","https://openalex.org/W2026068357","https://openalex.org/W2031752028","https://openalex.org/W2534634856"],"abstract_inverted_index":{"Abstract\u2014We":[0],"develop":[1],"an":[2,42,160],"image":[3,125,139,184,189,200],"registration":[4,126],"system":[5],"based":[6,77],"on":[7],"biomechanical":[8],"modeling":[9],"of":[10,50,90,166],"the":[11,51,83,88,91,133,137,170,173,182,186],"prostate":[12,23,92,208],"and":[13,65,71,93,101,112,158],"surrounding":[14,94],"tissues":[15,95],"to":[16,97,123,136,140,151,185],"register":[17],"cancerous":[18],"tumor":[19],"locations":[20],"for":[21,62,109,155,169,190],"targeted":[22],"brachytherapy":[24,63],"treatment":[25,193],"planning.":[26,194],"Cancerous":[27],"tumors":[28],"can":[29],"be":[30],"identified":[31],"using":[32],"magnetic":[33,58,202],"resonance":[34,59,203],"spectroscopy":[35,179,210],"(MRS)":[36],"imaging,":[37,204],"which":[38],"is":[39,55],"acquired":[40],"with":[41],"endorectal":[43,98],"probe":[44,54,99],"that":[45],"causes":[46],"significant":[47],"nonlinear":[48],"deformation":[49,89],"prostate.":[52,171],"The":[53],"removed":[56],"during":[57,192],"(MR)":[60],"imaging":[61],"planning":[64],"therapy.":[66],"Given":[67],"2-dimensional":[68],"segmented":[69],"MR":[70,138,144,149,188],"MRS":[72,153,183],"images,":[73],"our":[74],"finite":[75,196],"element":[76,197],"model":[78,107],"defines":[79],"a":[80,119,142,177],"mapping":[81,135],"between":[82],"probe-in/out":[84],"images":[85,150,154],"by":[86,131],"estimating":[87],"due":[96],"insertion":[100],"balloon":[102],"inflation.":[103],"Treating":[104],"uncertain":[105],"patient-specific":[106],"parameters":[108],"tissue":[110],"stiffness":[111],"external":[113],"forces":[114],"as":[115],"variables,":[116],"we":[117,175],"compute":[118],"locally":[120],"optimal":[121],"solution":[122],"maximize":[124],"quality.":[127],"We":[128,146],"visualize":[129],"results":[130],"applying":[132],"computed":[134],"generate":[141],"deformed":[143,148],"image.":[145],"compare":[147],"corresponding":[152],"5":[156],"patients":[157],"obtain":[159],"average":[161],"Dice":[162],"Similarity":[163],"Coefficient":[164],"(DSC)":[165],"95.6":[167],"%":[168],"Using":[172],"mapping,":[174],"warp":[176],"regular":[178],"grid":[180],"from":[181],"probe-out":[187],"use":[191],"Keywords\u2014brachytherapy,":[195],"model,":[198],"HDR,":[199],"registration,":[201],"MR,":[205],"MRS,":[206],"optimization,":[207],"cancer,":[209],"I.":[211]},"counts_by_year":[{"year":2012,"cited_by_count":2}],"updated_date":"2026-11-03T10:50:19.383937","created_date":"2016-06-24T00:00:00"}