{"id":"https://openalex.org/W2142788198","doi":"https://doi.org/10.1109/cvpr.2008.4587746","title":"Active microscopic cellular image annotation by superposable graph transduction with imbalanced labels","display_name":"Active microscopic cellular image annotation by superposable graph transduction with imbalanced labels","publication_year":2008,"publication_date":"2008-06-01","ids":{"openalex":"https://openalex.org/W2142788198","doi":"https://doi.org/10.1109/cvpr.2008.4587746","mag":"2142788198"},"language":"en","primary_location":{"id":"doi:10.1109/cvpr.2008.4587746","doi":"https://doi.org/10.1109/cvpr.2008.4587746","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cvpr.2008.4587746","pdf_url":null,"source":{"id":"https://openalex.org/S4210176548","display_name":"IEEE Computer Society Conference on Computer Vision and Pattern Recognition/Proceedings - IEEE Computer Society Conference on Computer Vision and Pattern Recognition/Proceedings","issn_l":"1063-6919","issn":["1063-6919","2332-564X","2575-7075"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","norway-1"],"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2008 IEEE Conference on Computer Vision and Pattern Recognition","raw_type":"proceedings-article"},"volume":null,"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100332169","display_name":"Jun Wang","orcid":"https://orcid.org/0000-0003-3422-104X","observed_orcids":["https://orcid.org/0000-0003-3422-104X"]},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jun Wang","raw_affiliation_strings":["Department of Electrical Engineering, Columbia University, USA","Dept. of Electr. Eng., Columbia Univ., Columbia, NY"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering, Columbia University, USA","institution_ids":["https://openalex.org/I78577930"]},{"raw_affiliation_string":"Dept. of Electr. Eng., Columbia Univ., Columbia, NY","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108217852","display_name":"Shih-Fu Chang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shih-Fu Chang","raw_affiliation_strings":["Department of Electrical Engineering, Columbia University, USA","Dept. of Electr. Eng., Columbia Univ., Columbia, NY"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering, Columbia University, USA","institution_ids":["https://openalex.org/I78577930"]},{"raw_affiliation_string":"Dept. of Electr. Eng., Columbia Univ., Columbia, NY","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078528016","display_name":"Xiaobo Zhou","orcid":"https://orcid.org/0000-0002-0466-7609","observed_orcids":["https://orcid.org/0000-0002-0466-7609"]},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaobo Zhou","raw_affiliation_strings":["Methodist Hospital Research Institute, Cornell University, USA","The Methodist Hospital Research Institute, Cornell University, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Methodist Hospital Research Institute, Cornell University, USA","institution_ids":["https://openalex.org/I205783295"]},{"raw_affiliation_string":"The Methodist Hospital Research Institute, Cornell University, USA","institution_ids":["https://openalex.org/I205783295"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5109196697","display_name":"Stephen T. C. Wong","orcid":"https://orcid.org/0000-0001-9188-6502","observed_orcids":["https://orcid.org/0000-0001-9188-6502","https://orcid.org/0000-0002-8906-6465"]},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephen T. C. Wong","raw_affiliation_strings":["Methodist Hospital Research Institute, Cornell University, USA","The Methodist Hospital Research Institute, Cornell University, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Methodist Hospital Research Institute, Cornell University, USA","institution_ids":["https://openalex.org/I205783295"]},{"raw_affiliation_string":"The Methodist Hospital Research Institute, Cornell University, USA","institution_ids":["https://openalex.org/I205783295"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":16.3739,"has_fulltext":false,"cited_by_count":48,"citation_normalized_percentile":{"value":0.99619048,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.5098000168800354,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.5098000168800354,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12072","display_name":"Machine Learning and Algorithms","score":0.42260000109672546,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12535","display_name":"Machine Learning and Data Classification","score":0.009999999776482582,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/active-learning-machine-learning","display_name":"active learning (machine learning)","score":0.8949999809265137},{"id":"https://openalex.org/keywords/label-propagation","display_name":"label propagation","score":0.871999979019165},{"id":"https://openalex.org/keywords/label-imbalance","display_name":"label imbalance","score":0.8960000276565552},{"id":"https://openalex.org/keywords/interactive-annotation","display_name":"interactive annotation","score":0.6830000281333923},{"id":"https://openalex.org/keywords/microscopy-images","display_name":"microscopic images","score":0.7319999933242798}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.8492739796638489},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7254667282104492},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.6005338430404663},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5122296214103699},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4927685558795929},{"id":"https://openalex.org/C15152581","wikidata":"https://www.wikidata.org/wiki/Q7833966","display_name":"Transduction (biophysics)","level":2,"score":0.4804894030094147},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.417710542678833},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.4149729609489441},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3200197219848633},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.1725374162197113},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13060420751571655},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/cvpr.2008.4587746","doi":"https://doi.org/10.1109/cvpr.2008.4587746","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cvpr.2008.4587746","pdf_url":null,"source":{"id":"https://openalex.org/S4210176548","display_name":"IEEE Computer Society Conference on Computer Vision and Pattern Recognition/Proceedings - IEEE Computer Society Conference on Computer Vision and Pattern Recognition/Proceedings","issn_l":"1063-6919","issn":["1063-6919","2332-564X","2575-7075"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","norway-1"],"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2008 IEEE Conference on Computer Vision and Pattern Recognition","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.329.1387","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.329.1387","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.ee.columbia.edu/ln/dvmm/publications/08/annotation_cvpr08.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.408.3048","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.408.3048","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://mplab.ucsd.edu/wp-content/uploads/cvpr2008/conference/data/papers/406.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"sustainable_development_goals_aurora":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1535477549","https://openalex.org/W2073232459","https://openalex.org/W2075744820","https://openalex.org/W2104290444","https://openalex.org/W2136504847","https://openalex.org/W2138388365","https://openalex.org/W2139823104","https://openalex.org/W2146388786","https://openalex.org/W2149532872","https://openalex.org/W2152322845","https://openalex.org/W2154455818","https://openalex.org/W2294984095","https://openalex.org/W2398979342","https://openalex.org/W2476481250","https://openalex.org/W2603733831","https://openalex.org/W2997701990","https://openalex.org/W6635184699","https://openalex.org/W6959560793"],"related_works":["https://openalex.org/W3204396196","https://openalex.org/W4403905440","https://openalex.org/W2288807527","https://openalex.org/W3132114310","https://openalex.org/W4391512208","https://openalex.org/W4398191262","https://openalex.org/W1581140119","https://openalex.org/W6963731874","https://openalex.org/W3203303344","https://openalex.org/W4285522404"],"abstract_inverted_index":{"Systematic":[0],"content":[1],"screening":[2,104],"of":[3,23,49,119,128,153],"cell":[4],"phenotypes":[5],"in":[6,13,27,44,100,137],"microscopic":[7],"images":[8,26,149],"has":[9],"been":[10],"shown":[11],"promising":[12],"gene":[14],"function":[15],"understanding":[16],"and":[17,25,56,76,146],"drug":[18],"design.":[19],"However,":[20],"manual":[21],"annotation":[22,42,136],"cells":[24],"genome-wide":[28],"studies":[29],"is":[30,52,89],"cost":[31],"prohibitive.":[32],"In":[33],"this":[34,68],"paper,":[35],"we":[36],"propose":[37],"a":[38,46,70,78,85,109,130],"highly":[39],"efficient":[40],"active":[41],"framework,":[43],"which":[45,112],"small":[47],"amount":[48],"expert":[50],"input":[51],"leveraged":[53],"to":[54,91,133],"rapidly":[55],"effectively":[57],"infer":[58],"the":[59,62,93,101,114,151,154],"labels":[60],"over":[61,143,157],"remaining":[63],"unlabeled":[64],"data.":[65],"We":[66,106,125],"formulate":[67],"as":[69],"graph":[71,115],"based":[72],"transductive":[73],"learning":[74],"problem":[75],"develop":[77],"novel":[79],"method":[80,88,156],"for":[81],"label":[82,86,95],"propagation.":[83],"Specifically,":[84],"regularizer":[87],"proposed":[90,155],"handle":[92],"important":[94],"imbalance":[96],"issue,":[97],"typically":[98],"seen":[99],"cellular":[102,148],"image":[103],"applications.":[105],"also":[107],"design":[108],"new":[110],"scheme":[111],"breaks":[113],"into":[116],"linear":[117],"superposition":[118],"contributions":[120],"from":[121],"individual":[122],"labeled":[123],"samples.":[124],"take":[126],"advantage":[127],"such":[129],"superposable":[131],"representation":[132],"achieve":[134],"fast":[135],"an":[138],"interactive":[139],"setting.":[140],"Extensive":[141],"evaluations":[142],"toy":[144],"data":[145],"realistic":[147],"confirm":[150],"superiority":[152],"existing":[158],"alternatives.":[159]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":5},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":4}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2016-06-24T00:00:00"}