{"id":"https://openalex.org/W2141051908","doi":"https://doi.org/10.1086/341915","title":"Recent Taxonomic Changes and Terminology Update of Clinically Significant Anaerobic Gram\u2010Negative Bacteria (Excluding Spirochetes)","display_name":"Recent Taxonomic Changes and Terminology Update of Clinically Significant Anaerobic Gram\u2010Negative Bacteria (Excluding Spirochetes)","publication_year":2002,"publication_date":"2002-09-01","ids":{"openalex":"https://openalex.org/W2141051908","doi":"https://doi.org/10.1086/341915","mag":"2141051908","pmid":"https://pubmed.ncbi.nlm.nih.gov/12173103"},"language":"en","primary_location":{"id":"doi:10.1086/341915","doi":"https://doi.org/10.1086/341915","is_oa":false,"landing_page_url":"https://doi.org/10.1086/341915","pdf_url":null,"source":{"id":"https://openalex.org/S72350973","display_name":"Clinical Infectious Diseases","issn_l":"1058-4838","issn":["1058-4838","1537-6591"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Clinical Infectious Diseases","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001569288","display_name":"Hannele R. Jousimies-Somer","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hannele Jousimies\u2010Somer","raw_affiliation_strings":["National Public Health Institute, Anaerobe Reference Laboratory, Helsinki, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Public Health Institute, Anaerobe Reference Laboratory, Helsinki, Finland","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082318445","display_name":"Paula H. Summanen","orcid":"https://orcid.org/0000-0001-7577-6602","observed_orcids":["https://orcid.org/0000-0001-7577-6602"]},"institutions":[{"id":"https://openalex.org/I1322918889","display_name":"United States Department of Veterans Affairs","ror":"https://ror.org/05rsv9s98","country_code":"US","type":"government","lineage":["https://openalex.org/I1322918889"]},{"id":"https://openalex.org/I4210156876","display_name":"VA Greater Los Angeles Healthcare System","ror":"https://ror.org/05xcarb80","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1322918889","https://openalex.org/I2799886695","https://openalex.org/I4210138663","https://openalex.org/I4210156876"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Paula Summanen","raw_affiliation_strings":["Reprints or correspondence:Paula Summanen, Veterans Affairs Medical Center, Wadsworth Anaerobic Bacteriology Laboratory, Bldg. 304, Rm. E3-224, VAGHLAS 691-151J, Los Angeles, CA 90073 ( [email protected] )"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Reprints or correspondence:Paula Summanen, Veterans Affairs Medical Center, Wadsworth Anaerobic Bacteriology Laboratory, Bldg. 304, Rm. E3-224, VAGHLAS 691-151J, Los Angeles, CA 90073 ( [email protected] )","institution_ids":["https://openalex.org/I1322918889","https://openalex.org/I4210156876"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5082318445"],"corresponding_institution_ids":["https://openalex.org/I1322918889","https://openalex.org/I4210156876"],"apc_list":{"value":4763,"currency":"USD","value_usd":4763},"apc_paid":null,"fwci":2.6151,"has_fulltext":false,"cited_by_count":86,"citation_normalized_percentile":{"value":0.89282154,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"35","issue":"s1","first_page":"S17","last_page":"S21"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":0.9721999764442444,"subfield":{"id":"https://openalex.org/subfields/1308","display_name":"Clinical Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":0.9721999764442444,"subfield":{"id":"https://openalex.org/subfields/1308","display_name":"Clinical Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12824","display_name":"Infections and bacterial resistance","score":0.008299999870359898,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.005100000184029341,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gram-negative-anaerobic-bacteria","display_name":"Gram-negative anaerobic bacteria","score":0.9860000014305115},{"id":"https://openalex.org/keywords/bacterial-taxonomy","display_name":"bacterial taxonomy","score":0.984000027179718},{"id":"https://openalex.org/keywords/bacterial-nomenclature","display_name":"bacterial nomenclature","score":0.9940000176429749},{"id":"https://openalex.org/keywords/16s-rrna-gene-sequencing","display_name":"16S rRNA gene sequencing","score":0.8479999899864197},{"id":"https://openalex.org/keywords/bacterial-reclassification","display_name":"bacterial reclassification","score":0.6150000095367432},{"id":"https://openalex.org/keywords/new-genera-and-species","display_name":"new genus and species","score":0.6940000057220459},{"id":"https://openalex.org/keywords/synonyms","display_name":"synonyms","score":0.7300000190734863}],"concepts":[{"id":"https://openalex.org/C514705636","wikidata":"https://www.wikidata.org/wiki/Q863247","display_name":"Nomenclature","level":3,"score":0.7397098541259766},{"id":"https://openalex.org/C2992397963","wikidata":"https://www.wikidata.org/wiki/Q189790","display_name":"Anaerobic bacteria","level":3,"score":0.7294847369194031},{"id":"https://openalex.org/C58642233","wikidata":"https://www.wikidata.org/wiki/Q8269924","display_name":"Taxonomy (biology)","level":2,"score":0.6255187392234802},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.5977252721786499},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.5438705682754517},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.541164219379425},{"id":"https://openalex.org/C124104306","wikidata":"https://www.wikidata.org/wiki/Q4840005","display_name":"Bacterial taxonomy","level":4,"score":0.5275349617004395},{"id":"https://openalex.org/C71640776","wikidata":"https://www.wikidata.org/wiki/Q16521","display_name":"Taxon","level":2,"score":0.4599217176437378},{"id":"https://openalex.org/C2778175407","wikidata":"https://www.wikidata.org/wiki/Q36642","display_name":"Species name","level":3,"score":0.4249178469181061},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.4168175160884857},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.33622124791145325},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.31125593185424805},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.2553369402885437},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.1304330825805664},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10906282067298889},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001439","descriptor_name":"Bacteroides","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001441","descriptor_name":"Bacteroides fragilis","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D002206","descriptor_name":"Capnocytophaga","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D005673","descriptor_name":"Fusobacterium","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D006089","descriptor_name":"Gram-Negative Anaerobic Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013144","descriptor_name":"Spirochaetales","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D017861","descriptor_name":"Porphyromonas","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D018720","descriptor_name":"Prevotella","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D020560","descriptor_name":"Proteobacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1086/341915","doi":"https://doi.org/10.1086/341915","is_oa":false,"landing_page_url":"https://doi.org/10.1086/341915","pdf_url":null,"source":{"id":"https://openalex.org/S72350973","display_name":"Clinical Infectious Diseases","issn_l":"1058-4838","issn":["1058-4838","1537-6591"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Clinical Infectious Diseases","raw_type":"journal-article"},{"id":"pmid:12173103","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/12173103","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Clinical infectious diseases : an official publication of the Infectious Diseases Society of America","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.7246000170707703,"id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":27,"referenced_works":["https://openalex.org/W1606619617","https://openalex.org/W1777269504","https://openalex.org/W1917777914","https://openalex.org/W1976748203","https://openalex.org/W1984334056","https://openalex.org/W1986061526","https://openalex.org/W1986991899","https://openalex.org/W2014222800","https://openalex.org/W2060584796","https://openalex.org/W2062350583","https://openalex.org/W2075914800","https://openalex.org/W2107918642","https://openalex.org/W2118918804","https://openalex.org/W2132493560","https://openalex.org/W2134088364","https://openalex.org/W2138907188","https://openalex.org/W2147882108","https://openalex.org/W2153041068","https://openalex.org/W2155948778","https://openalex.org/W2158222472","https://openalex.org/W2164185862","https://openalex.org/W2165924947","https://openalex.org/W2166448082","https://openalex.org/W2166785990","https://openalex.org/W2343892901","https://openalex.org/W4246399287","https://openalex.org/W6997304611"],"related_works":["https://openalex.org/W4313283915","https://openalex.org/W2441004994","https://openalex.org/W2413537346","https://openalex.org/W4414713204","https://openalex.org/W2164185862","https://openalex.org/W4254742701","https://openalex.org/W1982676644","https://openalex.org/W2083270616","https://openalex.org/W1967225572","https://openalex.org/W4404024193"],"abstract_inverted_index":{"Because":[0],"of":[1,13,39,60,72,83],"access":[2],"to":[3,69,76],"16S":[4],"rDNA":[5],"sequencing,":[6],"changes":[7],"in":[8],"the":[9,49],"taxonomy":[10],"and":[11,22,27,43,58,81],"nomenclature":[12,51],"anaerobic":[14,61],"gram-negative":[15],"bacteria":[16,62],"have":[17,24,30],"occurred":[18],"lately.":[19],"New":[20],"genera":[21],"species":[23],"been":[25,31],"described,":[26],"existing":[28],"taxa":[29],"reclassified.":[32],"The":[33],"present":[34],"article":[35],"compiles":[36],"a":[37],"list":[38],"clinically":[40],"relevant":[41],"anaerobes":[42],"provides":[44],"synonyms":[45],"as":[46,48],"well":[47],"old":[50],"used":[52],"for":[53],"these":[54],"bacteria.":[55],"Although":[56],"names":[57,75],"classifications":[59],"are":[63],"changing":[64],"quickly,":[65],"it":[66],"is":[67],"important":[68],"keep":[70],"track":[71],"new":[73],"bacterial":[74],"work":[77],"toward":[78],"better":[79],"description":[80],"recognition":[82],"bacterium-disease":[84],"associations.":[85]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":7}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}