{"id":"https://openalex.org/W2139836713","doi":"https://doi.org/10.1038/ismej.2011.180","title":"Corals shed bacteria as a potential mechanism of resilience to organic matter enrichment","display_name":"Corals shed bacteria as a potential mechanism of resilience to organic matter enrichment","publication_year":2011,"publication_date":"2011-12-22","ids":{"openalex":"https://openalex.org/W2139836713","doi":"https://doi.org/10.1038/ismej.2011.180","mag":"2139836713","pmid":"https://pubmed.ncbi.nlm.nih.gov/22189494","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/3358026"},"language":"en","primary_location":{"id":"doi:10.1038/ismej.2011.180","doi":"https://doi.org/10.1038/ismej.2011.180","is_oa":true,"landing_page_url":"https://doi.org/10.1038/ismej.2011.180","pdf_url":"https://www.nature.com/articles/ismej2011180.pdf","source":{"id":"https://openalex.org/S149218730","display_name":"The ISME Journal","issn_l":"1751-7362","issn":["1751-7362","1751-7370"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The ISME Journal","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://www.nature.com/articles/ismej2011180.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082963776","display_name":"Melissa Garren","orcid":"https://orcid.org/0000-0001-9422-8492","observed_orcids":["https://orcid.org/0000-0001-9422-8492"]},"institutions":[{"id":"https://openalex.org/I150209017","display_name":"Scripps Institution of Oceanography","ror":"https://ror.org/04v7hvq31","country_code":"US","type":"facility","lineage":["https://openalex.org/I150209017","https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Melissa Garren","raw_affiliation_strings":["Marine Biology Research Division, Scripps Institution of Oceanography , La Jolla, CA , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Marine Biology Research Division, Scripps Institution of Oceanography , La Jolla, CA , USA","institution_ids":["https://openalex.org/I150209017"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083189446","display_name":"Farooq Azam","orcid":"https://orcid.org/0000-0002-3859-3572","observed_orcids":["https://orcid.org/0000-0002-3859-3572"]},"institutions":[{"id":"https://openalex.org/I150209017","display_name":"Scripps Institution of Oceanography","ror":"https://ror.org/04v7hvq31","country_code":"US","type":"facility","lineage":["https://openalex.org/I150209017","https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Farooq Azam","raw_affiliation_strings":["Marine Biology Research Division, Scripps Institution of Oceanography , La Jolla, CA , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Marine Biology Research Division, Scripps Institution of Oceanography , La Jolla, CA , USA","institution_ids":["https://openalex.org/I150209017"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5082963776"],"corresponding_institution_ids":["https://openalex.org/I150209017"],"apc_list":{"value":3675,"currency":"EUR","value_usd":4153},"apc_paid":null,"fwci":2.0889,"has_fulltext":true,"cited_by_count":64,"citation_normalized_percentile":{"value":0.85842236,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"6","issue":"6","first_page":"1159","last_page":"1165"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10341","display_name":"Coral and Marine Ecosystems Studies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10341","display_name":"Coral and Marine Ecosystems Studies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11340","display_name":"Marine Sponges and Natural Products","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/1305","display_name":"Biotechnology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11684","display_name":"Vibrio bacteria research studies","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bacterial-shedding","display_name":"bacterial shedding","score":0.9449999928474426},{"id":"https://openalex.org/keywords/organic-matter-enrichment","display_name":"organic enrichment","score":0.8080000281333923},{"id":"https://openalex.org/keywords/coral-resilience","display_name":"coral resilience","score":0.7839999794960022},{"id":"https://openalex.org/keywords/pocillopora-damicornis","display_name":"Pocillopora damicornis","score":0.9419999718666077},{"id":"https://openalex.org/keywords/vibrio-coralliilyticus","display_name":"Vibrio coralliilyticus","score":0.9950000047683716},{"id":"https://openalex.org/keywords/coral-associated-bacteria","display_name":"coral-associated bacteria","score":0.6650000214576721},{"id":"https://openalex.org/keywords/coral-disease","display_name":"coral disease","score":0.593999981880188},{"id":"https://openalex.org/keywords/coral-reef-degradation","display_name":"coral reef degradation","score":0.5370000004768372}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9358858466148376},{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.7639747262001038},{"id":"https://openalex.org/C2779585090","wikidata":"https://www.wikidata.org/wiki/Q3457762","display_name":"Resilience (materials science)","level":2,"score":0.6750401258468628},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.5443463325500488},{"id":"https://openalex.org/C48743137","wikidata":"https://www.wikidata.org/wiki/Q1783121","display_name":"Organic matter","level":2,"score":0.4650118947029114},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.430929958820343},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08264809846878052},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.04776385426521301},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":true},{"descriptor_ui":"D014733","descriptor_name":"Vibrio","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D018613","descriptor_name":"Microscopy, Confocal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D037421","descriptor_name":"Anthozoa","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D037421","descriptor_name":"Anthozoa","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D057138","descriptor_name":"Bacterial Shedding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1038/ismej.2011.180","doi":"https://doi.org/10.1038/ismej.2011.180","is_oa":true,"landing_page_url":"https://doi.org/10.1038/ismej.2011.180","pdf_url":"https://www.nature.com/articles/ismej2011180.pdf","source":{"id":"https://openalex.org/S149218730","display_name":"The ISME Journal","issn_l":"1751-7362","issn":["1751-7362","1751-7370"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The ISME Journal","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:2663808","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3358026","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3358026","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3358026","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ISME J","raw_type":"Text"},{"id":"pmid:22189494","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22189494","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The ISME journal","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1038/ismej.2011.180","doi":"https://doi.org/10.1038/ismej.2011.180","is_oa":true,"landing_page_url":"https://doi.org/10.1038/ismej.2011.180","pdf_url":"https://www.nature.com/articles/ismej2011180.pdf","source":{"id":"https://openalex.org/S149218730","display_name":"The ISME Journal","issn_l":"1751-7362","issn":["1751-7362","1751-7370"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The ISME Journal","raw_type":"journal-article"},"sustainable_development_goals":[{"score":1.0,"id":"https://metadata.un.org/sdg/14","display_name":"Life below water"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G537674039","display_name":"Bacterial Interactions Underlying Coral Disease Resistance","funder_award_id":"0962721","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306202","display_name":"Gordon and Betty Moore Foundation","ror":"https://ror.org/006wxqw41"},{"id":"https://openalex.org/F4320308893","display_name":"Robert and Patricia Switzer Foundation","ror":"https://ror.org/05nvmvs54"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2139836713.pdf","grobid_xml":"https://content.openalex.org/works/W2139836713.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W1938603644","https://openalex.org/W1968206284","https://openalex.org/W1971254634","https://openalex.org/W2003099302","https://openalex.org/W2015871297","https://openalex.org/W2033461047","https://openalex.org/W2052759556","https://openalex.org/W2055203500","https://openalex.org/W2077877183","https://openalex.org/W2094165220","https://openalex.org/W2094725998","https://openalex.org/W2099851143","https://openalex.org/W2100437705","https://openalex.org/W2110648162","https://openalex.org/W2118966760","https://openalex.org/W2122030574","https://openalex.org/W2137251070","https://openalex.org/W2138528146","https://openalex.org/W2160258211","https://openalex.org/W2164337693","https://openalex.org/W2171903812"],"related_works":["https://openalex.org/W30330631","https://openalex.org/W2971845831","https://openalex.org/W4283582370","https://openalex.org/W4391955437","https://openalex.org/W2591990936","https://openalex.org/W2745325622","https://openalex.org/W4295308269","https://openalex.org/W4392382638","https://openalex.org/W4210493273","https://openalex.org/W2061798612"],"abstract_inverted_index":{"Understanding":[0],"the":[1,56,63,92,95,131,146,198,220,231],"mechanisms":[2],"of":[3,5,33,65,109,116,140,240],"resilience":[4],"coral":[6,51,96,118,132,163,184],"reefs":[7],"to":[8,25,54,155,166,197,223],"anthropogenic":[9],"stressors":[10],"is":[11],"a":[12,103,125],"critical":[13],"step":[14],"toward":[15],"mitigating":[16],"their":[17,66,75,173],"current":[18],"global":[19],"decline.":[20],"Coral-bacteria":[21],"associations":[22],"are":[23,213],"fundamental":[24],"reef":[26],"health":[27],"and":[28,77,119,161],"disease,":[29],"but":[30],"direct":[31,110,195],"observations":[32],"these":[34],"interactions":[35],"remain":[36],"largely":[37],"unexplored.":[38],"Here,":[39],"we":[40],"use":[41],"novel":[42,221],"technology,":[43],"high-speed":[44,113],"laser":[45],"scanning":[46],"confocal":[47,114],"microscopy":[48,115],"on":[49,130],"live":[50],"(Pocillopora":[52],"damicornis),":[53],"test":[55,91],"hypothesis":[57,93,199],"that":[58,78,94,145,162,200],"corals":[59,177],"exert":[60],"control":[61,176],"over":[62],"abundance":[64,148],"associated":[67,121],"bacterial":[68,83,122,147,211],"communities":[69],"by":[70,86,208],"releasing":[71],"('shedding')":[72],"bacteria":[73,135,171,202],"from":[74,172],"surface,":[76],"this":[79,150,225],"mechanism":[80,207],"can":[81,100],"counteract":[82],"growth":[84],"stimulated":[85],"organic":[87,216],"inputs.":[88],"We":[89],"also":[90],"pathogen":[97],"Vibrio":[98],"coralliilyticus":[99],"evade":[101],"such":[102],"defense":[104],"mechanism.":[105],"This":[106],"first":[107],"report":[108],"observation":[111],"with":[112],"living":[117],"its":[120],"community":[123],"revealed":[124],"layer":[126,151],"(3.3-146.8":[127],"\u03bcm":[128],"thick)":[129],"surface":[133],"where":[134],"were":[136],"concentrated.":[137],"The":[138],"results":[139,193],"two":[141],"independent":[142],"experiments":[143],"showed":[144],"in":[149,228],"was":[152],"not":[153],"sensitive":[154],"enrichment":[156,167],"(5":[157],"mg":[158],"l(-1)":[159],"peptone),":[160],"fragments":[164],"exposed":[165],"released":[168],"significantly":[169],"more":[170],"surfaces":[174],"than":[175],"(P<0.01;":[178],"35.9\u00b11.4":[179],"\u00d7":[180,187],"10(5)":[181,188],"cells":[182,189],"cm(-2)":[183,190],"versus":[185],"1.3\u00b10.5":[186],"coral).":[191],"Our":[192],"provide":[194],"support":[196],"shedding":[201],"may":[203],"be":[204],"an":[205,234],"important":[206],"which":[209],"coral-associated":[210],"abundances":[212],"regulated":[214],"under":[215],"matter":[217],"stress.":[218],"Additionally,":[219],"ability":[222],"watch":[224],"ecological":[226],"behavior":[227],"real-time":[229],"at":[230],"microscale":[232],"opens":[233],"unexplored":[235],"avenue":[236],"for":[237],"mechanistic":[238],"studies":[239],"coral-microbe":[241],"interactions.":[242]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":8},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":3}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
