{"id":"https://openalex.org/W2138962032","doi":"https://doi.org/10.1016/j.compbiomed.2010.01.005","title":"Linked Metabolites: A tool for the construction of directed metabolic graphs","display_name":"Linked Metabolites: A tool for the construction of directed metabolic graphs","publication_year":2010,"publication_date":"2010-02-09","ids":{"openalex":"https://openalex.org/W2138962032","doi":"https://doi.org/10.1016/j.compbiomed.2010.01.005","mag":"2138962032","pmid":"https://pubmed.ncbi.nlm.nih.gov/20138614"},"language":"en","primary_location":{"id":"doi:10.1016/j.compbiomed.2010.01.005","doi":"https://doi.org/10.1016/j.compbiomed.2010.01.005","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiomed.2010.01.005","pdf_url":null,"source":{"id":"https://openalex.org/S44278595","display_name":"Computers in Biology and Medicine","issn_l":"0010-4825","issn":["0010-4825","1879-0534"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doyens","jufo-2","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computers in Biology and Medicine","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035605136","display_name":"John M. Easton","orcid":"https://orcid.org/0000-0001-8745-6753","observed_orcids":["https://orcid.org/0000-0001-8745-6753"]},"institutions":[{"id":"https://openalex.org/I79619799","display_name":"University of Birmingham","ror":"https://ror.org/03angcq70","country_code":"GB","type":"education","lineage":["https://openalex.org/I79619799"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"John M. Easton","raw_affiliation_strings":["School of Electronic, Electrical and Computer Engineering, University of Birmingham, Edgbaston, Birmingham, UK","School of Electronic, Electrical and Computer Engineering, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Electronic, Electrical and Computer Engineering, University of Birmingham, Edgbaston, Birmingham, UK","institution_ids":["https://openalex.org/I79619799"]},{"raw_affiliation_string":"School of Electronic, Electrical and Computer Engineering, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK#TAB#","institution_ids":["https://openalex.org/I79619799"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068555008","display_name":"Lisa M. Harris","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210100347","display_name":"Birmingham Children's Hospital","ror":"https://ror.org/017k80q27","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I4210100347","https://openalex.org/I4210155225"]},{"id":"https://openalex.org/I79619799","display_name":"University of Birmingham","ror":"https://ror.org/03angcq70","country_code":"GB","type":"education","lineage":["https://openalex.org/I79619799"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Lisa M. Harris","raw_affiliation_strings":["Cancer Sciences, University of Birmingham, Birmingham, UK and Birmingham Children's Hospital NHS Foundation Trust, Birmingham, UK#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cancer Sciences, University of Birmingham, Birmingham, UK and Birmingham Children's Hospital NHS Foundation Trust, Birmingham, UK#TAB#","institution_ids":["https://openalex.org/I4210100347","https://openalex.org/I79619799"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055611974","display_name":"Mark R. Viant","orcid":"https://orcid.org/0000-0001-5898-4119","observed_orcids":["https://orcid.org/0000-0001-5898-4119","https://orcid.org/0000-0003-1019-4577"]},"institutions":[{"id":"https://openalex.org/I79619799","display_name":"University of Birmingham","ror":"https://ror.org/03angcq70","country_code":"GB","type":"education","lineage":["https://openalex.org/I79619799"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Mark R. Viant","raw_affiliation_strings":["School of Biosciences University of Birmingham  Birmingham UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biosciences University of Birmingham  Birmingham UK","institution_ids":["https://openalex.org/I79619799"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089084978","display_name":"Andrew C. Peet","orcid":"https://orcid.org/0000-0002-4846-5152","observed_orcids":["https://orcid.org/0000-0002-4846-5152"]},"institutions":[{"id":"https://openalex.org/I4210100347","display_name":"Birmingham Children's Hospital","ror":"https://ror.org/017k80q27","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I4210100347","https://openalex.org/I4210155225"]},{"id":"https://openalex.org/I79619799","display_name":"University of Birmingham","ror":"https://ror.org/03angcq70","country_code":"GB","type":"education","lineage":["https://openalex.org/I79619799"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Andrew C. Peet","raw_affiliation_strings":["Cancer Sciences, University of Birmingham, Birmingham, UK and Birmingham Children's Hospital NHS Foundation Trust, Birmingham, UK#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cancer Sciences, University of Birmingham, Birmingham, UK and Birmingham Children's Hospital NHS Foundation Trust, Birmingham, UK#TAB#","institution_ids":["https://openalex.org/I4210100347","https://openalex.org/I79619799"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026657286","display_name":"Theodoros N. Arvanitis","orcid":"https://orcid.org/0000-0001-5473-135X","observed_orcids":["https://orcid.org/0000-0001-5473-135X"]},"institutions":[{"id":"https://openalex.org/I4210100347","display_name":"Birmingham Children's Hospital","ror":"https://ror.org/017k80q27","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I4210100347","https://openalex.org/I4210155225"]},{"id":"https://openalex.org/I79619799","display_name":"University of Birmingham","ror":"https://ror.org/03angcq70","country_code":"GB","type":"education","lineage":["https://openalex.org/I79619799"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Theodoros N. Arvanitis","raw_affiliation_strings":["School of Electronic, Electrical and Computer Engineering, University of Birmingham Edgbaston Birmingham, B15 2TT, UK and Birmingham Children's Hospital NHS Foundation Trust, Birmingham, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Electronic, Electrical and Computer Engineering, University of Birmingham Edgbaston Birmingham, B15 2TT, UK and Birmingham Children's Hospital NHS Foundation Trust, Birmingham, UK","institution_ids":["https://openalex.org/I4210100347","https://openalex.org/I79619799"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3080,"currency":"USD","value_usd":3080},"apc_paid":null,"fwci":0.3186,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.53501882,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":95},"biblio":{"volume":"40","issue":"3","first_page":"340","last_page":"349"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9448000192642212,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9448000192642212,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.04619999974966049,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.0015999999595806003,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/kegg-pathways","display_name":"KEGG pathways","score":0.8420000076293945},{"id":"https://openalex.org/keywords/metabolic-network-visualization","display_name":"metabolic network visualization","score":0.5130000114440918}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7105011940002441},{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.6463675498962402},{"id":"https://openalex.org/C192989942","wikidata":"https://www.wikidata.org/wiki/Q68685","display_name":"Metabolic pathway","level":3,"score":0.6074128150939941},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5922677516937256},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5794898867607117},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.44553709030151367},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3390563130378723},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32021671533584595},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.26629912853240967},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2005937695503235},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.188626229763031},{"id":"https://openalex.org/C62231903","wikidata":"https://www.wikidata.org/wiki/Q1057","display_name":"Metabolism","level":2,"score":0.12902042269706726},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0849505364894867},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07083719968795776},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008660","descriptor_name":"Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1016/j.compbiomed.2010.01.005","doi":"https://doi.org/10.1016/j.compbiomed.2010.01.005","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiomed.2010.01.005","pdf_url":null,"source":{"id":"https://openalex.org/S44278595","display_name":"Computers in Biology and Medicine","issn_l":"0010-4825","issn":["0010-4825","1879-0534"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doyens","jufo-2","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computers in Biology and Medicine","raw_type":"journal-article"},{"id":"pmid:20138614","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20138614","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computers in biology and medicine","raw_type":"Journal Article"},{"id":"pmh:oai:alma.44SUR_INST:11139920560002346","doi":null,"is_oa":false,"landing_page_url":"https://openresearch.surrey.ac.uk/esploro/outputs/journalArticle/Linked-metabolites-a-tool-for-the/99516223802346","pdf_url":null,"source":{"id":"https://openalex.org/S4210197018","display_name":"Open Research (University of Surrey)","issn_l":"2688-268X","issn":["2688-268X","2688-3988"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","poland-20","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"pmh:oai:epubs.surrey.ac.uk:823814","doi":null,"is_oa":false,"landing_page_url":"http://epubs.surrey.ac.uk/823814/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400680","display_name":"Surrey Research Insight Open Access (The University of Surrey)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I28290843","host_organization_name":"University of Surrey","host_organization_lineage":["https://openalex.org/I28290843"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/decfeda5-34bd-4ea6-94be-22d036c52b50","doi":null,"is_oa":false,"landing_page_url":"https://research.birmingham.ac.uk/en/publications/decfeda5-34bd-4ea6-94be-22d036c52b50","pdf_url":null,"source":{"id":"https://openalex.org/S4306402634","display_name":"University of Birmingham Research Portal (University of Birmingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I79619799","host_organization_name":"University of Birmingham","host_organization_lineage":["https://openalex.org/I79619799"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Easton, J, Harris, LM, Viant, M, Peet, A & Arvanitis, T 2010, 'Linked Metabolites: A tool for the construction of directed metabolic graphs.', Computers in Biology and Medicine, vol. 40, no. 3, pp. 340-9. https://doi.org/10.1016/j.compbiomed.2010.01.005","raw_type":"article"},{"id":"pmh:oai:pure.atira.dk:publications/decfeda5-34bd-4ea6-94be-22d036c52b50","doi":null,"is_oa":false,"landing_page_url":"https://birmingham.elsevierpure.com/en/publications/decfeda5-34bd-4ea6-94be-22d036c52b50","pdf_url":null,"source":{"id":"https://openalex.org/S4306402634","display_name":"University of Birmingham Research Portal (University of Birmingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I79619799","host_organization_name":"University of Birmingham","host_organization_lineage":["https://openalex.org/I79619799"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Easton , J , Harris , LM , Viant , M , Peet , A & Arvanitis , T 2010 , ' Linked Metabolites: A tool for the construction of directed metabolic graphs. ' , Computers in Biology and Medicine , vol. 40 , no. 3 , pp. 340-9 . https://doi.org/10.1016/j.compbiomed.2010.01.005","raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G4038079114","display_name":null,"funder_award_id":"NER/J/S/2002/00618","funder_id":"https://openalex.org/F4320334631","funder_display_name":"Natural Environment Research Council"}],"funders":[{"id":"https://openalex.org/F4320319990","display_name":"National Institute for Health and Care Research","ror":"https://ror.org/0187kwz08"},{"id":"https://openalex.org/F4320334631","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W1020953626","https://openalex.org/W1503013560","https://openalex.org/W1964119857","https://openalex.org/W1969040600","https://openalex.org/W1976893340","https://openalex.org/W1986182860","https://openalex.org/W2009749555","https://openalex.org/W2034543587","https://openalex.org/W2079143519","https://openalex.org/W2094755397","https://openalex.org/W2097032746","https://openalex.org/W2110699703","https://openalex.org/W2120676369","https://openalex.org/W2122380937","https://openalex.org/W2126415088","https://openalex.org/W2133319394","https://openalex.org/W2137219567","https://openalex.org/W2142936616","https://openalex.org/W2146405308","https://openalex.org/W2147714160","https://openalex.org/W2150908245","https://openalex.org/W2152776677","https://openalex.org/W2153624566","https://openalex.org/W2159482845","https://openalex.org/W2165674132","https://openalex.org/W2169517653","https://openalex.org/W2169528473","https://openalex.org/W2227557434","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2163410580","https://openalex.org/W3088857048","https://openalex.org/W1998865837","https://openalex.org/W2263111931","https://openalex.org/W7100174476","https://openalex.org/W2612031720","https://openalex.org/W2952703786","https://openalex.org/W7096081380","https://openalex.org/W6927462336","https://openalex.org/W2129702158"],"abstract_inverted_index":null,"counts_by_year":[{"year":2018,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-11-05T12:25:35.769452","created_date":"2016-06-24T00:00:00"}