{"id":"https://openalex.org/W2136362162","doi":"https://doi.org/10.1098/rsta.2011.0134","title":"Performance database: capturing data for optimizing distributed streaming workflows","display_name":"Performance database: capturing data for optimizing distributed streaming workflows","publication_year":2011,"publication_date":"2011-07-18","ids":{"openalex":"https://openalex.org/W2136362162","doi":"https://doi.org/10.1098/rsta.2011.0134","mag":"2136362162","pmid":"https://pubmed.ncbi.nlm.nih.gov/21768139"},"language":"en","primary_location":{"id":"doi:10.1098/rsta.2011.0134","doi":"https://doi.org/10.1098/rsta.2011.0134","is_oa":false,"landing_page_url":"https://doi.org/10.1098/rsta.2011.0134","pdf_url":null,"source":{"id":"https://openalex.org/S99517592","display_name":"Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences","issn_l":"1364-503X","issn":["1364-503X","1471-2962"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-a","jufo-2","ki-jl-2","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319787","host_organization_name":"Royal Society","host_organization_lineage":["https://openalex.org/P4310319787"],"host_organization_lineage_names":["Royal Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009459014","display_name":"Chee Sun Liew","orcid":"https://orcid.org/0000-0003-3217-3523","observed_orcids":["https://orcid.org/0000-0003-3217-3523"]},"institutions":[{"id":"https://openalex.org/I33849332","display_name":"University of Malaya","ror":"https://ror.org/00rzspn62","country_code":"MY","type":"education","lineage":["https://openalex.org/I33849332"]},{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB","MY"],"is_corresponding":true,"raw_author_name":"Chee Sun Liew","raw_affiliation_strings":["Faculty of Computer Science and Information Technology, University of Malaya, 50603 Kuala Lumpur, Malaysia","School of Informatics, University of Edinburgh, 10 Crichton Street, Edinburgh EH8 9AB, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer Science and Information Technology, University of Malaya, 50603 Kuala Lumpur, Malaysia","institution_ids":["https://openalex.org/I33849332"]},{"raw_affiliation_string":"School of Informatics, University of Edinburgh, 10 Crichton Street, Edinburgh EH8 9AB, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077169494","display_name":"Malcolm Atkinson","orcid":"https://orcid.org/0000-0003-2632-0013","observed_orcids":["https://orcid.org/0000-0003-2632-0013"]},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Malcolm P. Atkinson","raw_affiliation_strings":["School of Informatics, University of Edinburgh, 10 Crichton Street, Edinburgh EH8 9AB, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Informatics, University of Edinburgh, 10 Crichton Street, Edinburgh EH8 9AB, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074750446","display_name":"Rados\u0142aw Ostrowski","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Rados\u0142aw Ostrowski","raw_affiliation_strings":["EPCC, University of Edinburgh, JCMB, The Kings Buildings, Mayfield Road, Edinburgh EH9 3JZ, UK","School of Physics and Astronomy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"EPCC, University of Edinburgh, JCMB, The Kings Buildings, Mayfield Road, Edinburgh EH9 3JZ, UK","institution_ids":["https://openalex.org/I98677209"]},{"raw_affiliation_string":"School of Physics and Astronomy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032376930","display_name":"Murray Cole","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Murray Cole","raw_affiliation_strings":["School of Informatics, University of Edinburgh, 10 Crichton Street, Edinburgh EH8 9AB, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Informatics, University of Edinburgh, 10 Crichton Street, Edinburgh EH8 9AB, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053639270","display_name":"Jano I. Van Hemert","orcid":"https://orcid.org/0000-0003-0834-7079","observed_orcids":["https://orcid.org/0000-0003-0834-7079"]},"institutions":[{"id":"https://openalex.org/I4405268036","display_name":"Optos Public Limited Company (United Kingdom)","ror":"https://ror.org/05gmadn26","country_code":"GB","type":"company","lineage":["https://openalex.org/I4405268036"]},{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Jano I. van Hemert","raw_affiliation_strings":["Optos, Queensferry House, Carnegie Campus, Enterprise Way, Dunfermline KY11 8GR, UK","School of Informatics, University of Edinburgh, 10 Crichton Street, Edinburgh EH8 9AB, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Optos, Queensferry House, Carnegie Campus, Enterprise Way, Dunfermline KY11 8GR, UK","institution_ids":["https://openalex.org/I4405268036"]},{"raw_affiliation_string":"School of Informatics, University of Edinburgh, 10 Crichton Street, Edinburgh EH8 9AB, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023625466","display_name":"Liangxiu Han","orcid":"https://orcid.org/0000-0003-2491-7473","observed_orcids":["https://orcid.org/0000-0003-2491-7473"]},"institutions":[{"id":"https://openalex.org/I11983389","display_name":"Manchester Metropolitan University","ror":"https://ror.org/02hstj355","country_code":"GB","type":"education","lineage":["https://openalex.org/I11983389"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Liangxiu Han","raw_affiliation_strings":["School of Computing, Mathematics and Digital Technology, Manchester Metropolitan University, Chester Street, Manchester M1 5GD, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing, Mathematics and Digital Technology, Manchester Metropolitan University, Chester Street, Manchester M1 5GD, UK","institution_ids":["https://openalex.org/I11983389"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5009459014"],"corresponding_institution_ids":["https://openalex.org/I33849332","https://openalex.org/I98677209"],"apc_list":null,"apc_paid":null,"fwci":3.8022,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.94065024,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"369","issue":"1949","first_page":"3268","last_page":"3284"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.6342999935150146,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.6342999935150146,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10317","display_name":"Advanced Database Systems and Queries","score":0.15279999375343323,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.12939999997615814,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/performance-database","display_name":"performance database","score":0.9779999852180481},{"id":"https://openalex.org/keywords/workflow-enactment","display_name":"workflow enactment","score":0.8370000123977661},{"id":"https://openalex.org/keywords/performance-data-collection","display_name":"performance data collection","score":0.7459999918937683},{"id":"https://openalex.org/keywords/workflow-optimization","display_name":"workflow optimization","score":0.921999990940094},{"id":"https://openalex.org/keywords/workflow-efficiency","display_name":"workflow efficiency","score":0.6470000147819519},{"id":"https://openalex.org/keywords/data-mining","display_name":"data mining","score":0.5199999809265137}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.9165792465209961},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7986443042755127},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5990242958068848},{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.5672189593315125},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4243509769439697},{"id":"https://openalex.org/C70061542","wikidata":"https://www.wikidata.org/wiki/Q989016","display_name":"Distributed database","level":2,"score":0.4124827980995178},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.359293669462204},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C46141821","wikidata":"https://www.wikidata.org/wiki/Q209402","display_name":"Nuclear magnetic resonance","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1098/rsta.2011.0134","doi":"https://doi.org/10.1098/rsta.2011.0134","is_oa":false,"landing_page_url":"https://doi.org/10.1098/rsta.2011.0134","pdf_url":null,"source":{"id":"https://openalex.org/S99517592","display_name":"Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences","issn_l":"1364-503X","issn":["1364-503X","1471-2962"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-a","jufo-2","ki-jl-2","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319787","host_organization_name":"Royal Society","host_organization_lineage":["https://openalex.org/P4310319787"],"host_organization_lineage_names":["Royal Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences","raw_type":"journal-article"},{"id":"pmid:21768139","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21768139","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Philosophical transactions. Series A, Mathematical, physical, and engineering sciences","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[],"sustainable_development_goals_aurora":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.5699999928474426}],"study_designs":[],"awards":[{"id":"https://openalex.org/G4280021062","display_name":null,"funder_award_id":"EP/D079829/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G5600857876","display_name":"e-Science Core Programme Senior Research Fellow","funder_award_id":"EP/D079829/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1795725","https://openalex.org/W153367128","https://openalex.org/W204770603","https://openalex.org/W1572531288","https://openalex.org/W1598163061","https://openalex.org/W1968681563","https://openalex.org/W1972034280","https://openalex.org/W2069433961","https://openalex.org/W2094271094","https://openalex.org/W2104998023","https://openalex.org/W2113184715","https://openalex.org/W2115570304","https://openalex.org/W2154513453","https://openalex.org/W2158321579","https://openalex.org/W2164544761","https://openalex.org/W2399869838","https://openalex.org/W2620485168"],"related_works":["https://openalex.org/W2966427334","https://openalex.org/W7096557579","https://openalex.org/W1837482209","https://openalex.org/W2098982627","https://openalex.org/W4387294655","https://openalex.org/W7097407426","https://openalex.org/W2059713624","https://openalex.org/W152877856","https://openalex.org/W7002623221","https://openalex.org/W7098228850"],"abstract_inverted_index":{"The":[0,44],"performance":[1],"database":[2],"(PDB)":[3],"stores":[4],"performance-related":[5],"data":[6],"gathered":[7],"during":[8],"workflow":[9],"enactment.":[10],"We":[11,61],"argue":[12],"that,":[13],"by":[14],"carefully":[15],"understanding":[16],"and":[17,36,55],"manipulating":[18],"these":[19],"data,":[20],"we":[21],"can":[22],"improve":[23],"efficiency":[24],"when":[25],"enacting":[26],"workflows.":[27],"This":[28],"paper":[29],"describes":[30],"the":[31,34,51,69],"rationale":[32],"behind":[33],"PDB,":[35],"proposes":[37],"a":[38],"systematic":[39],"way":[40],"to":[41,67],"implement":[42],"it.":[43],"prototype":[45],"is":[46],"built":[47],"as":[48],"part":[49],"of":[50,71],"Advanced":[52],"Data":[53],"Mining":[54],"Integration":[56],"Research":[57],"for":[58],"Europe":[59],"project.":[60],"use":[62],"workflows":[63],"from":[64],"real-world":[65],"experiments":[66],"demonstrate":[68],"usage":[70],"PDB.":[72]},"counts_by_year":[{"year":2018,"cited_by_count":4},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-09-24T07:57:37.273135","created_date":"2016-06-24T00:00:00"}
