{"id":"https://openalex.org/W2136291980","doi":"https://doi.org/10.1371/journal.pone.0089606","title":"Semantics in Support of Biodiversity Knowledge Discovery: An Introduction to the Biological Collections Ontology and Related Ontologies","display_name":"Semantics in Support of Biodiversity Knowledge Discovery: An Introduction to the Biological Collections Ontology and Related Ontologies","publication_year":2014,"publication_date":"2014-03-03","ids":{"openalex":"https://openalex.org/W2136291980","doi":"https://doi.org/10.1371/journal.pone.0089606","mag":"2136291980","pmid":"https://pubmed.ncbi.nlm.nih.gov/24595056","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/3940615"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pone.0089606","doi":"https://doi.org/10.1371/journal.pone.0089606","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pone.0089606","pdf_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0089606&type=printable","source":{"id":"https://openalex.org/S202381698","display_name":"PLoS ONE","issn_l":"1932-6203","issn":["1932-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS ONE","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0089606&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015253000","display_name":"Ramona Walls","orcid":"https://orcid.org/0000-0001-8815-0078","observed_orcids":["https://orcid.org/0000-0001-8815-0078"]},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ramona L. Walls","raw_affiliation_strings":["The iPlant Collaborative, University of Arizona, Tucson, Arizona, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The iPlant Collaborative, University of Arizona, Tucson, Arizona, United States of America","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007471579","display_name":"John Deck","orcid":"https://orcid.org/0000-0002-5905-1617","observed_orcids":["https://orcid.org/0000-0002-5905-1617"]},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John Deck","raw_affiliation_strings":["University of California, Berkeley, Berkeley, California, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California, Berkeley, Berkeley, California, United States of America","institution_ids":["https://openalex.org/I95457486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017811194","display_name":"Robert Guralnick","orcid":"https://orcid.org/0000-0001-6682-1504","observed_orcids":["https://orcid.org/0000-0001-6682-1504"]},"institutions":[{"id":"https://openalex.org/I188538660","display_name":"University of Colorado Boulder","ror":"https://ror.org/02ttsq026","country_code":"US","type":"education","lineage":["https://openalex.org/I188538660"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Guralnick","raw_affiliation_strings":["Department of Ecology and Evolutionary Biology and the CU Museum of Natural History, University of Colorado at Boulder, Boulder, Colorado, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Ecology and Evolutionary Biology and the CU Museum of Natural History, University of Colorado at Boulder, Boulder, Colorado, United States of America","institution_ids":["https://openalex.org/I188538660"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005335701","display_name":"Steve Baskauf","orcid":"https://orcid.org/0000-0003-4365-3135","observed_orcids":["https://orcid.org/0000-0003-4365-3135"]},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steve Baskauf","raw_affiliation_strings":["Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021556588","display_name":"Reed S. Beaman","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1313142568","display_name":"Florida Museum of Natural History","ror":"https://ror.org/02pjdv450","country_code":"US","type":"archive","lineage":["https://openalex.org/I1313142568","https://openalex.org/I33213144"]},{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Reed Beaman","raw_affiliation_strings":["University of Florida, Florida Museum of Natural History, Gainesville, Florida, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Florida, Florida Museum of Natural History, Gainesville, Florida, United States of America","institution_ids":["https://openalex.org/I1313142568","https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088527540","display_name":"Stanley Blum","orcid":"https://orcid.org/0000-0002-4419-6960","observed_orcids":["https://orcid.org/0000-0002-4419-6960"]},"institutions":[{"id":"https://openalex.org/I2803094215","display_name":"California Academy of Sciences","ror":"https://ror.org/02wb73912","country_code":"US","type":"archive","lineage":["https://openalex.org/I2803094215"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stanley Blum","raw_affiliation_strings":["Research Informatics, California Academy of Sciences, San Francisco, California, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Informatics, California Academy of Sciences, San Francisco, California, United States of America","institution_ids":["https://openalex.org/I2803094215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014091778","display_name":"Shawn Bowers","orcid":"https://orcid.org/0000-0002-2972-0197","observed_orcids":["https://orcid.org/0000-0002-2972-0197"]},"institutions":[{"id":"https://openalex.org/I119888943","display_name":"Gonzaga University","ror":"https://ror.org/03ze70h02","country_code":"US","type":"education","lineage":["https://openalex.org/I119888943"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shawn Bowers","raw_affiliation_strings":["Gonzaga University, Computer Science, Spokane, Washington, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Gonzaga University, Computer Science, Spokane, Washington, United States of America","institution_ids":["https://openalex.org/I119888943"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091806083","display_name":"Pier Luigi Buttigieg","orcid":"https://orcid.org/0000-0002-4366-3088","observed_orcids":["https://orcid.org/0000-0002-4366-3088"]},"institutions":[{"id":"https://openalex.org/I127251866","display_name":"Alfred-Wegener-Institut Helmholtz-Zentrum f\u00fcr Polar- und Meeresforschung","ror":"https://ror.org/032e6b942","country_code":"DE","type":"facility","lineage":["https://openalex.org/I127251866","https://openalex.org/I1305996414"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Pier Luigi Buttigieg","raw_affiliation_strings":["Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, Germany","institution_ids":["https://openalex.org/I127251866"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034891020","display_name":"Neil Davies","orcid":"https://orcid.org/0000-0001-8085-5014","observed_orcids":["https://orcid.org/0000-0001-8085-5014"]},"institutions":[{"id":"https://openalex.org/I4210144402","display_name":"Gump South Pacific Research Station","ror":"https://ror.org/04sk0et52","country_code":"PF","type":"facility","lineage":["https://openalex.org/I4210144402","https://openalex.org/I95457486"]},{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["PF","US"],"is_corresponding":false,"raw_author_name":"Neil Davies","raw_affiliation_strings":["University of California, Berkeley, Gump South Pacific Research Station, Moorea, French Polynesia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California, Berkeley, Gump South Pacific Research Station, Moorea, French Polynesia","institution_ids":["https://openalex.org/I4210144402","https://openalex.org/I95457486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014074073","display_name":"Dag Endresen","orcid":"https://orcid.org/0000-0002-2352-5497","observed_orcids":["https://orcid.org/0000-0002-2352-5497"]},"institutions":[{"id":"https://openalex.org/I184942183","display_name":"University of Oslo","ror":"https://ror.org/01xtthb56","country_code":"NO","type":"education","lineage":["https://openalex.org/I184942183"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Dag Endresen","raw_affiliation_strings":["GBIF Norway, Natural History Museum, University in Oslo, Oslo, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"GBIF Norway, Natural History Museum, University in Oslo, Oslo, Norway","institution_ids":["https://openalex.org/I184942183"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071612680","display_name":"Mar\u00eda A. Gandolfo","orcid":"https://orcid.org/0000-0002-5430-1808","observed_orcids":["https://orcid.org/0000-0002-5430-1808"]},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Maria Alejandra Gandolfo","raw_affiliation_strings":["LH Bailey Hortorium, Department of Plant Biology, Cornell University, Ithaca, New York, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LH Bailey Hortorium, Department of Plant Biology, Cornell University, Ithaca, New York, United States of America","institution_ids":["https://openalex.org/I205783295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063654030","display_name":"Robert Hanner","orcid":"https://orcid.org/0000-0003-0703-1646","observed_orcids":["https://orcid.org/0000-0003-0703-1646"]},"institutions":[{"id":"https://openalex.org/I79817857","display_name":"University of Guelph","ror":"https://ror.org/01r7awg59","country_code":"CA","type":"education","lineage":["https://openalex.org/I79817857"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Robert Hanner","raw_affiliation_strings":["Biodiversity Institute of Ontario, University of Guelph, Guelph, ON, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biodiversity Institute of Ontario, University of Guelph, Guelph, ON, Canada","institution_ids":["https://openalex.org/I79817857"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056415938","display_name":"Alyssa Janning","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alyssa Janning","raw_affiliation_strings":["School of Information Resources and Library Science, University of Arizona, Tucson, Arizona, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Resources and Library Science, University of Arizona, Tucson, Arizona, United States of America","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083477695","display_name":"Leonard Krishtalka","orcid":"https://orcid.org/0000-0001-8188-0676","observed_orcids":["https://orcid.org/0000-0001-8188-0676"]},"institutions":[{"id":"https://openalex.org/I146416000","display_name":"University of Kansas","ror":"https://ror.org/001tmjg57","country_code":"US","type":"education","lineage":["https://openalex.org/I146416000"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Leonard Krishtalka","raw_affiliation_strings":["Biodiversity Institute and Ecology & Evolutionary Biology, The University of Kansas, Lawrence, Kansas, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biodiversity Institute and Ecology & Evolutionary Biology, The University of Kansas, Lawrence, Kansas, United States of America","institution_ids":["https://openalex.org/I146416000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003262238","display_name":"Andr\u00e9a Matsunaga","orcid":"https://orcid.org/0000-0001-9036-5895","observed_orcids":["https://orcid.org/0000-0001-9036-5895"]},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andr\u00e9a Matsunaga","raw_affiliation_strings":["University of Florida, Gainesville, Florida, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Florida, Gainesville, Florida, United States of America","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049879477","display_name":"Peter E Midford","orcid":"https://orcid.org/0000-0001-6512-3296","observed_orcids":["https://orcid.org/0000-0001-6512-3296"]},"institutions":[{"id":"https://openalex.org/I146416000","display_name":"University of Kansas","ror":"https://ror.org/001tmjg57","country_code":"US","type":"education","lineage":["https://openalex.org/I146416000"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter Midford","raw_affiliation_strings":["Ecology and Evolutionary Biology, University of Kansas, Lawrence, Kansas, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ecology and Evolutionary Biology, University of Kansas, Lawrence, Kansas, United States of America","institution_ids":["https://openalex.org/I146416000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5142810692","display_name":"Norman Morrison","orcid":"https://orcid.org/0000-0003-1604-1512","observed_orcids":["https://orcid.org/0000-0003-1604-1512"]},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Norman Morrison","raw_affiliation_strings":["The BioVeL Project, School of Computer Science, The University of Manchester, Manchester, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The BioVeL Project, School of Computer Science, The University of Manchester, Manchester, United Kingdom","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048729075","display_name":"\u00c9amonn \u00d3 Tuama","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I111796040","display_name":"Global Biodiversity Information Facility","ror":"https://ror.org/05fjyn938","country_code":"DK","type":"other","lineage":["https://openalex.org/I111796040"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"\u00c9amonn \u00d3. Tuama","raw_affiliation_strings":["GBIF Secretariat, Copenhagen, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"GBIF Secretariat, Copenhagen, Denmark","institution_ids":["https://openalex.org/I111796040"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011057199","display_name":"Mark P. Schildhauer","orcid":"https://orcid.org/0000-0003-0632-7576","observed_orcids":["https://orcid.org/0000-0003-0632-7576"]},"institutions":[{"id":"https://openalex.org/I4210100421","display_name":"National Center for Ecological Analysis and Synthesis","ror":"https://ror.org/0146z4r19","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I154570441","https://openalex.org/I4210100421"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark Schildhauer","raw_affiliation_strings":["National Center for Ecological Analysis and Synthesis, Santa Barbara, California, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Ecological Analysis and Synthesis, Santa Barbara, California, United States of America","institution_ids":["https://openalex.org/I4210100421"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051216244","display_name":"Barry Smith","orcid":"https://orcid.org/0000-0003-1384-116X","observed_orcids":["https://orcid.org/0000-0003-1384-116X","https://orcid.org/0000-0002-8303-4569"]},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Barry Smith","raw_affiliation_strings":["Department of Philosophy, University at Buffalo, Buffalo, New York, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Philosophy, University at Buffalo, Buffalo, New York, United States of America","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102833422","display_name":"Brian J. Stucky","orcid":"https://orcid.org/0000-0003-0769-2970","observed_orcids":["https://orcid.org/0000-0003-0769-2970"]},"institutions":[{"id":"https://openalex.org/I188538660","display_name":"University of Colorado Boulder","ror":"https://ror.org/02ttsq026","country_code":"US","type":"education","lineage":["https://openalex.org/I188538660"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brian J. Stucky","raw_affiliation_strings":["Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, Colorado, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, Colorado, United States of America","institution_ids":["https://openalex.org/I188538660"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Andrea Thomer","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrea Thomer","raw_affiliation_strings":["Graduate School of Library and Information Science, University of Illinois at Urbana-Champaign, Urbana-Champaign, Illinois, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Library and Information Science, University of Illinois at Urbana-Champaign, Urbana-Champaign, Illinois, United States of America","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001880405","display_name":"John R. Wieczorek","orcid":"https://orcid.org/0000-0003-1144-0290","observed_orcids":["https://orcid.org/0000-0003-1144-0290"]},"institutions":[{"id":"https://openalex.org/I1316194761","display_name":"Museum of Vertebrate Zoology","ror":"https://ror.org/01rdg4502","country_code":"US","type":"archive","lineage":["https://openalex.org/I1316194761"]},{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John Wieczorek","raw_affiliation_strings":["3101 VLSB, Museum of Vertebrate Zoology, University of California, Berkeley, Berkeley, California, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"3101 VLSB, Museum of Vertebrate Zoology, University of California, Berkeley, Berkeley, California, United States of America","institution_ids":["https://openalex.org/I1316194761","https://openalex.org/I95457486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108135949","display_name":"Jamie Whitacre","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I103187081","display_name":"Smithsonian Institution","ror":"https://ror.org/01pp8nd67","country_code":"US","type":"government","lineage":["https://openalex.org/I103187081"]},{"id":"https://openalex.org/I1341618623","display_name":"National Museum of Natural History","ror":"https://ror.org/00cz47042","country_code":"US","type":"archive","lineage":["https://openalex.org/I103187081","https://openalex.org/I1341618623"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jamie Whitacre","raw_affiliation_strings":["Informatics Branch, Information Technology Office, National Museum of Natural History, Smithsonian Institution, Washington, DC, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Informatics Branch, Information Technology Office, National Museum of Natural History, Smithsonian Institution, Washington, DC, United States of America","institution_ids":["https://openalex.org/I103187081","https://openalex.org/I1341618623"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113578406","display_name":"John Wooley","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John Wooley","raw_affiliation_strings":["University of California San Diego, La Jolla, California, United States of America"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California San Diego, La Jolla, California, United States of America","institution_ids":["https://openalex.org/I36258959"]}]}],"institutions":[],"countries_distinct_count":7,"institutions_distinct_count":23,"corresponding_author_ids":["https://openalex.org/A5142810692"],"corresponding_institution_ids":["https://openalex.org/I28407311"],"apc_list":{"value":2382,"currency":"USD","value_usd":2382},"apc_paid":{"value":2382,"currency":"USD","value_usd":2382},"fwci":17.8932,"has_fulltext":true,"cited_by_count":164,"citation_normalized_percentile":{"value":0.99425287,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":93,"max":100},"biblio":{"volume":"9","issue":"3","first_page":"e89606","last_page":"e89606"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.5439000129699707,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.5439000129699707,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.2434999942779541,"subfield":{"id":"https://openalex.org/subfields/2718","display_name":"Health Informatics"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.1988999992609024,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/environment-ontology","display_name":"Environment Ontology","score":0.9380000233650208},{"id":"https://openalex.org/keywords/biodiversity-data-integration","display_name":"biodiversity data integration","score":0.6639999747276306},{"id":"https://openalex.org/keywords/darwin-core","display_name":"Darwin Core","score":0.6660000085830688},{"id":"https://openalex.org/keywords/obo-foundry","display_name":"OBO Foundry","score":0.796999990940094},{"id":"https://openalex.org/keywords/metadata-standards","display_name":"metadata standards","score":0.621999979019165},{"id":"https://openalex.org/keywords/museum-specimens","display_name":"museum specimens","score":0.6269999742507935},{"id":"https://openalex.org/keywords/voucher-specimens","display_name":"voucher specimens","score":0.9800000190734863},{"id":"https://openalex.org/keywords/environmental-samples","display_name":"environmental samples","score":0.7170000076293945},{"id":"https://openalex.org/keywords/dna-samples","display_name":"DNA samples","score":0.40700000524520874},{"id":"https://openalex.org/keywords/semantic-interoperability","display_name":"semantic interoperability","score":0.5249999761581421}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6869580745697021},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.6748702526092529},{"id":"https://openalex.org/C130217890","wikidata":"https://www.wikidata.org/wiki/Q47041","display_name":"Biodiversity","level":2,"score":0.6113427877426147},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.597468912601471},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5571726560592651},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.4577102065086365},{"id":"https://openalex.org/C78726541","wikidata":"https://www.wikidata.org/wiki/Q3882785","display_name":"Upper ontology","level":3,"score":0.42430296540260315},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.41771331429481506},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3980618119239807},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.37054985761642456},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.3014124631881714},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.28663119673728943},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18427357077598572},{"id":"https://openalex.org/C98893333","wikidata":"https://www.wikidata.org/wiki/Q4339878","display_name":"Ontology alignment","level":4,"score":0.18091616034507751},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019359","descriptor_name":"Knowledge","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D044822","descriptor_name":"Biodiversity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":14,"locations":[{"id":"doi:10.1371/journal.pone.0089606","doi":"https://doi.org/10.1371/journal.pone.0089606","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pone.0089606","pdf_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0089606&type=printable","source":{"id":"https://openalex.org/S202381698","display_name":"PLoS ONE","issn_l":"1932-6203","issn":["1932-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS ONE","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:2929280","doi":null,"is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC3940615","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"Text"},{"id":"pmid:24595056","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24595056","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PloS one","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3940615","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC3940615/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS One","raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/88412206-a809-4076-a339-d967c550f4d5","doi":null,"is_oa":true,"landing_page_url":"https://research.manchester.ac.uk/en/publications/88412206-a809-4076-a339-d967c550f4d5","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:epic.awi.de:43651","doi":null,"is_oa":true,"landing_page_url":"https://epic.awi.de/id/eprint/43651/1/pone.PDF","pdf_url":"https://epic.awi.de/id/eprint/43651/1/pone.PDF","source":{"id":"https://openalex.org/S4306400378","display_name":"Helmholtz-Zentrum f\u00fcr Polar-und Meeresforschung (Alfred-Wegener-Institut)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2799732068","host_organization_name":"Royal Prince Alfred Hospital","host_organization_lineage":["https://openalex.org/I2799732068"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.802.8423","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.802.8423","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/96/52/pone.0089606.PMC3940615.pdf","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:fe650213a15044938075f67f4d601b75","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/fe650213a15044938075f67f4d601b75","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS ONE, Vol 9, Iss 3, p e89606 (2014)","raw_type":"article"},{"id":"pmh:oai:kuscholarworks.ku.edu:1808/13473","doi":null,"is_oa":true,"landing_page_url":"http://hdl.handle.net/1808/13473","pdf_url":null,"source":{"id":"https://openalex.org/S4377196285","display_name":"KU ScholarWorks (University of Kansas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I146416000","host_organization_name":"University of Kansas","host_organization_lineage":["https://openalex.org/I146416000"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:philarchive.org/rec/WALSIS-2","doi":null,"is_oa":false,"landing_page_url":"https://philarchive.org/rec/WALSIS-2","pdf_url":null,"source":{"id":"https://openalex.org/S4306402130","display_name":"PhilPapers (PhilPapers Foundation)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:philpapers.org/rec/WALSIS-2","doi":null,"is_oa":false,"landing_page_url":"https://philpapers.org/rec/WALSIS-2","pdf_url":null,"source":{"id":"https://openalex.org/S4306402130","display_name":"PhilPapers (PhilPapers Foundation)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:repository.si.edu:10088/25718","doi":null,"is_oa":false,"landing_page_url":"http://hdl.handle.net/10088/25718","pdf_url":null,"source":{"id":"https://openalex.org/S4306402600","display_name":"Smithsonian Digital Repository (Smithsonian Institution)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I103187081","host_organization_name":"Smithsonian Institution","host_organization_lineage":["https://openalex.org/I103187081"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:www.duo.uio.no:10852/39077","doi":null,"is_oa":true,"landing_page_url":"http://hdl.handle.net/10852/39077","pdf_url":null,"source":{"id":"https://openalex.org/S7407064446","display_name":"NORA - Norwegian Open Research Archives","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"1932-6203","raw_type":"info:eu-repo/semantics/article"},{"id":"mag:200491925","doi":null,"is_oa":false,"landing_page_url":"https://philpapers.org/rec/WALSIS-2","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"doi:10.1371/journal.pone.0089606","doi":"https://doi.org/10.1371/journal.pone.0089606","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pone.0089606","pdf_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0089606&type=printable","source":{"id":"https://openalex.org/S202381698","display_name":"PLoS ONE","issn_l":"1932-6203","issn":["1932-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS ONE","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1930407478","display_name":"BioVeL - Biodiversity Virtual e-Laboratory","funder_award_id":"283359","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G2551509855","display_name":"Collaborative Research: BiSciCol Tracker:  Towards a tagging and tracking infrastructure for biodiversity science collections","funder_award_id":"0956426","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2738615977","display_name":"Collaborative Research: Data Integration for Repository Services in Biodiversity Informatics","funder_award_id":"0851313","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2759405052","display_name":"Collaborative Research:  BiSciCol Tracker:  Towards a tagging and tracking infrastructure for biodiversity science collections","funder_award_id":"0956371","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5263992367","display_name":"Collaborative Research:  BiSciCol Tracker:  Towards a Tagging and Tracking Infrastructure for Biodiversity Science Collections","funder_award_id":"0956350","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6124298671","display_name":"PSCIC Full Proposal: The iPlant Collaborative: A Cyberinfrastructure-Centered Community for a New Plant Biology","funder_award_id":"0735191","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6835773860","display_name":"RCN for Genomic and Metagenomic Standards","funder_award_id":"0840989","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7616146849","display_name":"National Center for Biomedical Ontology","funder_award_id":"U54HG004028","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G7877481164","display_name":"EAGER: An Interoperable Information Infrastructure for Biodiversity Research (I3BR)","funder_award_id":"1255035","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G93107851","display_name":"Marine Microbial Biodiversity, Bioinformatics and Biotechnology","funder_award_id":"287589","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2136291980.pdf","grobid_xml":"https://content.openalex.org/works/W2136291980.grobid-xml"},"referenced_works_count":62,"referenced_works":["https://openalex.org/W63642558","https://openalex.org/W1564494788","https://openalex.org/W1597538863","https://openalex.org/W1806630989","https://openalex.org/W1979600146","https://openalex.org/W1981625432","https://openalex.org/W1985283768","https://openalex.org/W1986907585","https://openalex.org/W1988148643","https://openalex.org/W1993180856","https://openalex.org/W2005999455","https://openalex.org/W2015191210","https://openalex.org/W2025062369","https://openalex.org/W2040704692","https://openalex.org/W2043059799","https://openalex.org/W2048647670","https://openalex.org/W2049130651","https://openalex.org/W2052153382","https://openalex.org/W2053473939","https://openalex.org/W2061920292","https://openalex.org/W2074513605","https://openalex.org/W2075716829","https://openalex.org/W2079335886","https://openalex.org/W2082076621","https://openalex.org/W2097877306","https://openalex.org/W2099901798","https://openalex.org/W2106581684","https://openalex.org/W2113142309","https://openalex.org/W2114227537","https://openalex.org/W2115523386","https://openalex.org/W2120375049","https://openalex.org/W2129687578","https://openalex.org/W2130814919","https://openalex.org/W2130861846","https://openalex.org/W2134678319","https://openalex.org/W2139934466","https://openalex.org/W2139995546","https://openalex.org/W2142237209","https://openalex.org/W2142675451","https://openalex.org/W2145367475","https://openalex.org/W2146871965","https://openalex.org/W2149378423","https://openalex.org/W2155370454","https://openalex.org/W2156689933","https://openalex.org/W2156750171","https://openalex.org/W2159033162","https://openalex.org/W2159327312","https://openalex.org/W2161139387","https://openalex.org/W2162153683","https://openalex.org/W2162584119","https://openalex.org/W2166654818","https://openalex.org/W2167352952","https://openalex.org/W2168099578","https://openalex.org/W2169286869","https://openalex.org/W2239083314","https://openalex.org/W2252448679","https://openalex.org/W2401098074","https://openalex.org/W2966839170","https://openalex.org/W3031614421","https://openalex.org/W4246066782","https://openalex.org/W4285719527","https://openalex.org/W7097346048"],"related_works":["https://openalex.org/W200491925","https://openalex.org/W3037610784","https://openalex.org/W7100865893","https://openalex.org/W3025862657","https://openalex.org/W2113806686","https://openalex.org/W117554582","https://openalex.org/W3046871315","https://openalex.org/W6964097510","https://openalex.org/W2142703992","https://openalex.org/W6931551375"],"abstract_inverted_index":{"The":[0],"study":[1],"of":[2,33,37,95,118,138,238],"biodiversity":[3,43,59,101,146,169,228,255,270],"spans":[4],"many":[5,94,210],"disciplines":[6],"and":[7,14,20,28,40,65,76,82,115,127,130,142,148,156,163,190,208,214,235,248,251,267,272],"includes":[8],"data":[9,60,102,140,264],"pertaining":[10],"to":[11,99,152,227,263],"species":[12],"distributions":[13],"abundances,":[15],"genetic":[16],"sequences,":[17],"trait":[18],"measurements,":[19],"ecological":[21,188,217],"niches,":[22],"complemented":[23],"by":[24,253],"information":[25],"on":[26],"collection":[27],"measurement":[29],"protocols.":[30],"A":[31],"review":[32],"the":[34,51,73,79,96,112,124,128,136,145,254],"current":[35],"landscape":[36],"metadata":[38],"standards":[39,48],"ontologies":[41,134,223,258],"in":[42,61,78,103],"science":[44],"suggests":[45],"that":[46,171,203,231,242],"existing":[47],"such":[49,71],"as":[50,72,166,168,245],"Darwin":[52],"Core":[53],"terminology":[54],"are":[55],"inadequate":[56],"for":[57,114],"describing":[58],"a":[62,89,119,246],"semantically":[63],"meaningful":[64],"computationally":[66],"useful":[67],"way.":[68],"Existing":[69],"ontologies,":[70],"Gene":[74],"Ontology":[75],"others":[77],"Open":[80],"Biological":[81,121],"Biomedical":[83],"Ontologies":[84],"(OBO)":[85],"Foundry":[86],"library,":[87],"provide":[88],"semantic":[90],"structure":[91],"but":[92],"lack":[93],"necessary":[97],"terms":[98],"describe":[100,111,153],"all":[104],"its":[105],"dimensions.":[106],"In":[107],"this":[108],"paper,":[109],"we":[110],"motivation":[113],"ongoing":[116],"development":[117],"new":[120],"Collections":[122],"Ontology,":[123,126],"Environment":[125],"Population":[129],"Community":[131],"Ontology.":[132],"These":[133],"share":[135],"aim":[137],"improving":[139],"aggregation":[141],"integration":[143],"across":[144],"domain":[147],"can":[149,224],"be":[150,225],"used":[151],"physical":[154,174],"samples":[155,197],"sampling":[157],"processes":[158],"(for":[159],"example,":[160],"collection,":[161],"extraction,":[162],"preservation":[164],"techniques),":[165],"well":[167],"observations":[170],"involve":[172],"no":[173],"sampling.":[175],"Together":[176],"they":[177],"encompass":[178],"studies":[179,189],"of:":[180],"1)":[181],"individual":[182],"organisms,":[183,211],"including":[184],"voucher":[185],"specimens":[186],"from":[187],"museum":[191],"specimens,":[192],"2)":[193],"bulk":[194],"or":[195],"environmental":[196],"(e.g.,":[198],"gut":[199],"contents,":[200],"soil,":[201],"water)":[202],"include":[204],"DNA,":[205],"other":[206],"molecules,":[207],"potentially":[209],"especially":[212],"microbes,":[213],"3)":[215],"survey-based":[216],"observations.":[218],"We":[219,240],"discuss":[220],"how":[221],"these":[222,257],"applied":[226,250],"use":[229],"cases":[230],"span":[232],"genetic,":[233],"organismal,":[234],"ecosystem":[236],"levels":[237],"organization.":[239],"argue":[241],"if":[243],"adopted":[244],"standard":[247],"rigorously":[249],"enriched":[252],"community,":[256],"would":[259],"significantly":[260],"reduce":[261],"barriers":[262],"discovery,":[265],"integration,":[266],"exchange":[268],"among":[269],"resources":[271],"researchers.":[273]},"counts_by_year":[{"year":2026,"cited_by_count":9},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":12},{"year":2022,"cited_by_count":16},{"year":2021,"cited_by_count":11},{"year":2020,"cited_by_count":12},{"year":2019,"cited_by_count":15},{"year":2018,"cited_by_count":16},{"year":2017,"cited_by_count":19},{"year":2016,"cited_by_count":19},{"year":2015,"cited_by_count":14},{"year":2014,"cited_by_count":8}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2016-06-24T00:00:00"}
