{"id":"https://openalex.org/W2124208240","doi":"https://doi.org/10.1186/1471-2105-14-289","title":"Calculation of Tajima\u2019s D and other neutrality test statistics from low depth next-generation sequencing data","display_name":"Calculation of Tajima\u2019s D and other neutrality test statistics from low depth next-generation sequencing data","publication_year":2013,"publication_date":"2013-10-02","ids":{"openalex":"https://openalex.org/W2124208240","doi":"https://doi.org/10.1186/1471-2105-14-289","mag":"2124208240","pmid":"https://pubmed.ncbi.nlm.nih.gov/24088262","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/4015034"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-14-289","doi":"https://doi.org/10.1186/1471-2105-14-289","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-289","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-289","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","ccf-c","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-2","oarl","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-289","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090964821","display_name":"Thorfinn Sand Korneliussen","orcid":"https://orcid.org/0000-0001-7576-5380","observed_orcids":["https://orcid.org/0000-0001-7576-5380"]},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]},{"id":"https://openalex.org/I4387152471","display_name":"Natural History Museum of Denmark","ror":"https://ror.org/040ck2b86","country_code":"DK","type":"archive","lineage":["https://openalex.org/I124055696","https://openalex.org/I4387152471"]}],"countries":["DK"],"is_corresponding":true,"raw_author_name":"Thorfinn Sand Korneliussen","raw_affiliation_strings":["Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Oestervoldgade 5-7, DK-1350, Copenhagen, Denmark. thorfinn@binf.ku.dk","Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Oestervoldgade 5-7, DK-1350, Copenhagen, Denmark. thorfinn@binf.ku.dk","institution_ids":["https://openalex.org/I124055696","https://openalex.org/I4387152471"]},{"raw_affiliation_string":"Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696","https://openalex.org/I4387152471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055365056","display_name":"Ida Moltke","orcid":"https://orcid.org/0000-0001-7052-8554","observed_orcids":["https://orcid.org/0000-0001-7052-8554"]},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]},{"id":"https://openalex.org/I40347166","display_name":"University of Chicago","ror":"https://ror.org/024mw5h28","country_code":"US","type":"education","lineage":["https://openalex.org/I40347166"]}],"countries":["DK","US"],"is_corresponding":false,"raw_author_name":"Ida Moltke","raw_affiliation_strings":["Department of Human Genetics, University of Chicago, 920 E. 58th Street, CLSC 5th floor, Chicago, IL, 60637, USA","The Bioinformatics Centre, Department of Biology, University of Copenhagen, Ole Maaloes Vej 5, DK-2200, Copenhagen, Denmark","Department of Human Genetics, University of Chicago, Chicago, USA","The Bioinformatics Centre, Department of Biology, University of Copenhagen, Copenhagen, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Human Genetics, University of Chicago, 920 E. 58th Street, CLSC 5th floor, Chicago, IL, 60637, USA","institution_ids":["https://openalex.org/I40347166"]},{"raw_affiliation_string":"The Bioinformatics Centre, Department of Biology, University of Copenhagen, Ole Maaloes Vej 5, DK-2200, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]},{"raw_affiliation_string":"Department of Human Genetics, University of Chicago, Chicago, USA","institution_ids":["https://openalex.org/I40347166"]},{"raw_affiliation_string":"The Bioinformatics Centre, Department of Biology, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003488251","display_name":"Anders Albrechtsen","orcid":"https://orcid.org/0000-0001-7306-031X","observed_orcids":["https://orcid.org/0000-0001-7306-031X"]},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Anders Albrechtsen","raw_affiliation_strings":["The Bioinformatics Centre, Department of Biology, University of Copenhagen, Ole Maaloes Vej 5, DK-2200, Copenhagen, Denmark","The Bioinformatics Centre, Department of Biology, University of Copenhagen, Copenhagen, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Bioinformatics Centre, Department of Biology, University of Copenhagen, Ole Maaloes Vej 5, DK-2200, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]},{"raw_affiliation_string":"The Bioinformatics Centre, Department of Biology, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088476239","display_name":"Rasmus Nielsen","orcid":"https://orcid.org/0000-0003-0513-6591","observed_orcids":["https://orcid.org/0000-0003-0513-6591"]},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rasmus Nielsen","raw_affiliation_strings":["Departments of Integrative Biology and Statistics, UC-Berkeley, 4098 VLSB, Berkeley, California, 94720, USA","Departments of Integrative Biology and Statistics, UC-Berkeley, Berkeley, California, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departments of Integrative Biology and Statistics, UC-Berkeley, 4098 VLSB, Berkeley, California, 94720, USA","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"Departments of Integrative Biology and Statistics, UC-Berkeley, Berkeley, California, USA","institution_ids":["https://openalex.org/I95457486"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5090964821"],"corresponding_institution_ids":["https://openalex.org/I124055696","https://openalex.org/I4387152471"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":{"value":2990,"currency":"USD","value_usd":2990},"fwci":4.384,"has_fulltext":true,"cited_by_count":278,"citation_normalized_percentile":{"value":0.96225688,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"14","issue":"1","first_page":"289","last_page":"289"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.8398000001907349,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.8398000001907349,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.04919999837875366,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.044599998742341995,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tajima-s-d","display_name":"Tajima's D","score":0.9990000128746033},{"id":"https://openalex.org/keywords/neutrality-tests","display_name":"neutrality tests","score":0.925000011920929},{"id":"https://openalex.org/keywords/natural-selection-detection","display_name":"natural selection detection","score":0.8180000185966492},{"id":"https://openalex.org/keywords/site-frequency-spectrum","display_name":"site frequency spectrum","score":0.8899999856948853},{"id":"https://openalex.org/keywords/low-sequencing-depth","display_name":"low sequencing depth","score":0.7360000014305115},{"id":"https://openalex.org/keywords/next-generation-sequencing","display_name":"next-generation sequencing","score":0.7269999980926514},{"id":"https://openalex.org/keywords/empirical-bayes","display_name":"empirical Bayes","score":0.8999999761581421},{"id":"https://openalex.org/keywords/ascertainment-bias","display_name":"ascertainment bias","score":0.8330000042915344},{"id":"https://openalex.org/keywords/missing-data","display_name":"missing data","score":0.8610000014305115},{"id":"https://openalex.org/keywords/1000-genomes-project","display_name":"1000 Genomes Project","score":0.8799999952316284},{"id":"https://openalex.org/keywords/genome-wide-analysis","display_name":"genome-wide analysis","score":0.5759999752044678}],"concepts":[{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.5084399580955505},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3904949128627777},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.320543110370636},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1760527789592743}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005240","descriptor_name":"Feasibility Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005787","descriptor_name":"Gene Frequency","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005828","descriptor_name":"Genetics, Population","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":true},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012641","descriptor_name":"Selection, Genetic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015982","descriptor_name":"Bias","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016013","descriptor_name":"Likelihood Functions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false}],"locations_count":9,"locations":[{"id":"doi:10.1186/1471-2105-14-289","doi":"https://doi.org/10.1186/1471-2105-14-289","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-289","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-289","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","ccf-c","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-2","oarl","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:3005793","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4015034","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:4015034","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4015034","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmid:24088262","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24088262","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:pure.atira.dk:openaire/6e11e799-8bed-42cb-b200-1d81e6f91ba5","doi":null,"is_oa":true,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/6e11e799-8bed-42cb-b200-1d81e6f91ba5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Korneliussen, T S, Moltke, I, Albrechtsen, A & Nielsen, R 2013, 'Calculation of Tajima's D and other neutrality test statistics from low depth next-generation sequencing data', B M C Bioinformatics, vol. 14, 289. https://doi.org/10.1186/1471-2105-14-289","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.712.5358","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.712.5358","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://geogenetics.ku.dk/staff/?pure%3Dfiles/91902596/Calculation_of_Tajima_s_D_and_other_neutrality_test.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.718.3225","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.718.3225","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.bric.ku.dk/staff/?pure%3Dfiles/44137823/Multivariate_Hawkes_process.pdf","raw_type":"text"},{"id":"pmh:oai:escholarship.org/ark:/13030/qt6dw0g4bz","doi":null,"is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/6dw0g4bz","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, vol 14, iss 1","raw_type":"article"},{"id":"pmh:qt6dw0g4bz","doi":null,"is_oa":false,"landing_page_url":"http://www.escholarship.org/uc/item/6dw0g4bz","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Korneliussen, Thorfinn Sand; Moltke, Ida; Albrechtsen, Anders; &amp; Nielsen, Rasmus. (2013). Calculation of Tajima's D and other neutrality test statistics from low depth next-generation sequencing data. BMC Bioinformatics, 14(1), 289. doi: http://dx.doi.org/10.1186/1471-2105-14-289. Retrieved from: http://www.escholarship.org/uc/item/6dw0g4bz","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-14-289","doi":"https://doi.org/10.1186/1471-2105-14-289","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-289","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-289","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","ccf-c","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-2","oarl","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1628407718","display_name":null,"funder_award_id":"DNRF94","funder_id":"https://openalex.org/F4320320943","funder_display_name":"Danmarks Grundforskningsfond"},{"id":"https://openalex.org/G4411660797","display_name":null,"funder_award_id":"00007171","funder_id":"https://openalex.org/F4320310490","funder_display_name":"Villum Fonden"}],"funders":[{"id":"https://openalex.org/F4320310490","display_name":"Villum Fonden","ror":"https://ror.org/007ww2d15"},{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320320943","display_name":"Danmarks Grundforskningsfond","ror":"https://ror.org/00znyv691"},{"id":"https://openalex.org/F4320322928","display_name":"Danmarks Frie Forskningsfond","ror":"https://ror.org/02sptwz63"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2124208240.pdf","grobid_xml":"https://content.openalex.org/works/W2124208240.grobid-xml"},"referenced_works_count":48,"referenced_works":["https://openalex.org/W1536721400","https://openalex.org/W1932538605","https://openalex.org/W1952185996","https://openalex.org/W1963751872","https://openalex.org/W1973513517","https://openalex.org/W1986132144","https://openalex.org/W2001725958","https://openalex.org/W2005287518","https://openalex.org/W2012840904","https://openalex.org/W2025253353","https://openalex.org/W2033995133","https://openalex.org/W2037710951","https://openalex.org/W2055055216","https://openalex.org/W2082967637","https://openalex.org/W2094210438","https://openalex.org/W2103903744","https://openalex.org/W2109494273","https://openalex.org/W2112113834","https://openalex.org/W2116668053","https://openalex.org/W2118526609","https://openalex.org/W2119180969","https://openalex.org/W2119279196","https://openalex.org/W2120571246","https://openalex.org/W2121286926","https://openalex.org/W2124960286","https://openalex.org/W2125300654","https://openalex.org/W2128016314","https://openalex.org/W2132393729","https://openalex.org/W2140784970","https://openalex.org/W2142403957","https://openalex.org/W2144658220","https://openalex.org/W2145059063","https://openalex.org/W2145371252","https://openalex.org/W2146405782","https://openalex.org/W2147575903","https://openalex.org/W2148181482","https://openalex.org/W2150131459","https://openalex.org/W2156171251","https://openalex.org/W2156595979","https://openalex.org/W2156866331","https://openalex.org/W2157149092","https://openalex.org/W2162289196","https://openalex.org/W2168133698","https://openalex.org/W2169421412","https://openalex.org/W2171777347","https://openalex.org/W2885727518","https://openalex.org/W4213279074","https://openalex.org/W7095782118"],"related_works":["https://openalex.org/W7099899127","https://openalex.org/W2405212477","https://openalex.org/W2012840904","https://openalex.org/W4280580996","https://openalex.org/W2767861231","https://openalex.org/W4408790141","https://openalex.org/W4297965074","https://openalex.org/W2156595979","https://openalex.org/W2142138981","https://openalex.org/W2152609982"],"abstract_inverted_index":{"BACKGROUND:":[0],"A":[1,101],"number":[2],"of":[3,21,39,47,74,90,104,114,181],"different":[4],"statistics":[5,17,30],"are":[6,19,31,53,169],"used":[7],"for":[8,128,148,158],"detecting":[9],"natural":[10],"selection":[11],"using":[12],"DNA":[13],"sequencing":[14,58,66,116],"data,":[15],"including":[16],"that":[18,86,108,153],"summaries":[20],"the":[22,37,60,72,75,88,91,112,122,129,167,176,184],"frequency":[23,48,96],"spectrum,":[24],"such":[25],"as":[26],"Tajima's":[27],"D.":[28],"These":[29],"now":[32],"often":[33],"being":[34],"applied":[35],"in":[36,65,71,178,192],"analysis":[38,130,180],"Next":[40],"Generation":[41],"Sequencing":[42],"(NGS)":[43],"data.":[44],"However,":[45],"estimates":[46],"spectra":[49],"from":[50,183],"NGS":[51,160],"data":[52,92,119,161,182],"strongly":[54],"affected":[55],"by":[56,137],"low":[57],"coverage;":[59],"inherent":[61],"technology":[62],"dependent":[63],"variation":[64],"depth":[67],"causes":[68],"systematic":[69],"differences":[70],"value":[73],"statistic":[76],"among":[77],"genomic":[78],"regions.":[79],"RESULTS:":[80],"We":[81,173],"have":[82],"developed":[83],"an":[84,144,179],"approach":[85,106,147],"accommodates":[87],"uncertainty":[89],"when":[93,166],"calculating":[94],"site":[95],"based":[97],"neutrality":[98,202],"test":[99],"statistics.":[100],"salient":[102],"feature":[103],"this":[105,154],"is":[107,190],"it":[109],"implicitly":[110],"solves":[111],"problems":[113,135],"varying":[115],"depth,":[117],"missing":[118],"and":[120,131],"avoids":[121,133],"need":[123],"to":[124,163,199],"infer":[125],"variable":[126],"sites":[127],"thereby":[132],"ascertainment":[134],"introduced":[136],"a":[138,193,205],"SNP":[139],"discovery":[140],"process.":[141],"CONCLUSION:":[142],"Using":[143],"empirical":[145],"Bayes":[146],"fast":[149,194],"computations,":[150],"we":[151],"show":[152],"method":[155,177,189],"produces":[156],"results":[157],"low-coverage":[159],"comparable":[162],"those":[164],"achieved":[165],"genotypes":[168],"known":[170],"without":[171],"uncertainty.":[172],"also":[174],"validate":[175],"1000":[185],"genomes":[186],"project.":[187],"The":[188],"implemented":[191],"framework":[195],"which":[196],"enables":[197],"researchers":[198],"perform":[200],"these":[201],"tests":[203],"on":[204],"genome-wide":[206],"scale.":[207]},"counts_by_year":[{"year":2026,"cited_by_count":18},{"year":2025,"cited_by_count":28},{"year":2024,"cited_by_count":26},{"year":2023,"cited_by_count":27},{"year":2022,"cited_by_count":22},{"year":2021,"cited_by_count":46},{"year":2020,"cited_by_count":25},{"year":2019,"cited_by_count":16},{"year":2018,"cited_by_count":14},{"year":2017,"cited_by_count":17},{"year":2016,"cited_by_count":15},{"year":2015,"cited_by_count":13},{"year":2014,"cited_by_count":10},{"year":2013,"cited_by_count":1}],"updated_date":"2026-11-06T12:05:46.655746","created_date":"2016-06-24T00:00:00"}
