{"id":"https://openalex.org/W2124188487","doi":"https://doi.org/10.1099/0022-1317-78-11-2847","title":"Sequence determination and phylogenetic analysis of the Akabane bunyavirus S RNA genome segment.","display_name":"Sequence determination and phylogenetic analysis of the Akabane bunyavirus S RNA genome segment.","publication_year":1997,"publication_date":"1997-11-01","ids":{"openalex":"https://openalex.org/W2124188487","doi":"https://doi.org/10.1099/0022-1317-78-11-2847","mag":"2124188487","pmid":"https://pubmed.ncbi.nlm.nih.gov/9367371"},"language":"en","primary_location":{"id":"doi:10.1099/0022-1317-78-11-2847","doi":"https://doi.org/10.1099/0022-1317-78-11-2847","is_oa":false,"landing_page_url":"https://doi.org/10.1099/0022-1317-78-11-2847","pdf_url":null,"source":{"id":"https://openalex.org/S103035011","display_name":"Journal of General Virology","issn_l":"0022-1317","issn":["0022-1317","1465-2099"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of General Virology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113675332","display_name":"Hiroomi Akashi","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210152963","display_name":"National Institute of Animal Health","ror":"https://ror.org/051ppg660","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1323638106","https://openalex.org/I4210152963"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"H Akashi","raw_affiliation_strings":["National Institute of Animal Health, Ibaraki, Japan. hmitsu@niah.affrc.go.jp","National Institute of Animal Health, 3\u20131\u20131 Kannondai, Tsukuba, Ibaraki 305, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of Animal Health, Ibaraki, Japan. hmitsu@niah.affrc.go.jp","institution_ids":["https://openalex.org/I4210152963"]},{"raw_affiliation_string":"National Institute of Animal Health, 3\u20131\u20131 Kannondai, Tsukuba, Ibaraki 305, Japan","institution_ids":["https://openalex.org/I4210152963"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111422955","display_name":"H Pang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210152963","display_name":"National Institute of Animal Health","ror":"https://ror.org/051ppg660","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1323638106","https://openalex.org/I4210152963"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"H Pang","raw_affiliation_strings":["National Institute of Animal Health, 3\u20131\u20131 Kannondai, Tsukuba, Ibaraki 305, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of Animal Health, 3\u20131\u20131 Kannondai, Tsukuba, Ibaraki 305, Japan","institution_ids":["https://openalex.org/I4210152963"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030298918","display_name":"Xiangdong Kong","orcid":"https://orcid.org/0000-0002-6088-4587","observed_orcids":["https://orcid.org/0000-0002-6088-4587"]},"institutions":[{"id":"https://openalex.org/I4210152963","display_name":"National Institute of Animal Health","ror":"https://ror.org/051ppg660","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1323638106","https://openalex.org/I4210152963"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"X G Kong","raw_affiliation_strings":["National Institute of Animal Health, 3\u20131\u20131 Kannondai, Tsukuba, Ibaraki 305, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of Animal Health, 3\u20131\u20131 Kannondai, Tsukuba, Ibaraki 305, Japan","institution_ids":["https://openalex.org/I4210152963"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102711232","display_name":"Yoshihiro Kaku","orcid":"https://orcid.org/0000-0001-7528-2805","observed_orcids":["https://orcid.org/0000-0001-7528-2805"]},"institutions":[{"id":"https://openalex.org/I4210152963","display_name":"National Institute of Animal Health","ror":"https://ror.org/051ppg660","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1323638106","https://openalex.org/I4210152963"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Y Kaku","raw_affiliation_strings":["National Institute of Animal Health, 3\u20131\u20131 Kannondai, Tsukuba, Ibaraki 305, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of Animal Health, 3\u20131\u20131 Kannondai, Tsukuba, Ibaraki 305, Japan","institution_ids":["https://openalex.org/I4210152963"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5113675332"],"corresponding_institution_ids":["https://openalex.org/I4210152963"],"apc_list":null,"apc_paid":null,"fwci":0.8498,"has_fulltext":false,"cited_by_count":60,"citation_normalized_percentile":{"value":0.76236744,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"78","issue":"11","first_page":"2847","last_page":"2851"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12047","display_name":"Viral Infections and Vectors","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12047","display_name":"Viral Infections and Vectors","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11135","display_name":"Virology and Viral Diseases","score":0.00559999980032444,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12733","display_name":"Vector-Borne Animal Diseases","score":0.004800000227987766,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/aino-virus","display_name":"Aino virus","score":0.6110000014305115},{"id":"https://openalex.org/keywords/n-gene","display_name":"N gene","score":0.9309999942779541},{"id":"https://openalex.org/keywords/nss-protein","display_name":"NSs protein","score":0.7979999780654907},{"id":"https://openalex.org/keywords/phylogenetic-analysis","display_name":"phylogenetic analysis","score":0.8399999737739563},{"id":"https://openalex.org/keywords/nucleotide-sequence-identity","display_name":"nucleotide identity","score":0.6710000038146973},{"id":"https://openalex.org/keywords/5-untranslated-region","display_name":"5' untranslated region","score":0.9629999995231628},{"id":"https://openalex.org/keywords/arbovirus-evolution","display_name":"arbovirus evolution","score":0.5389999747276306}],"concepts":[{"id":"https://openalex.org/C2780530800","wikidata":"https://www.wikidata.org/wiki/Q7072921","display_name":"ORFS","level":5,"score":0.9205243587493896},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.914112389087677},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.7180527448654175},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6801587343215942},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.6689420938491821},{"id":"https://openalex.org/C121158502","wikidata":"https://www.wikidata.org/wiki/Q4652161","display_name":"AKA","level":2,"score":0.5712976455688477},{"id":"https://openalex.org/C84148353","wikidata":"https://www.wikidata.org/wiki/Q863908","display_name":"Nucleic acid sequence","level":3,"score":0.558146595954895},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.513043999671936},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5096249580383301},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.46977919340133667},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.4597698450088501},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4537827968597412},{"id":"https://openalex.org/C47289529","wikidata":"https://www.wikidata.org/wiki/Q908550","display_name":"Open reading frame","level":4,"score":0.41158634424209595},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.182300865650177},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.0},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012840","descriptor_name":"Simbu virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1099/0022-1317-78-11-2847","doi":"https://doi.org/10.1099/0022-1317-78-11-2847","is_oa":false,"landing_page_url":"https://doi.org/10.1099/0022-1317-78-11-2847","pdf_url":null,"source":{"id":"https://openalex.org/S103035011","display_name":"Journal of General Virology","issn_l":"0022-1317","issn":["0022-1317","1465-2099"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of General Virology","raw_type":"journal-article"},{"id":"pmid:9367371","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/9367371","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of general virology","raw_type":"Journal Article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.328.9491","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.328.9491","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://vir.sgmjournals.org/content/78/11/2847.full.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W110166314","https://openalex.org/W1558516755","https://openalex.org/W1559758063","https://openalex.org/W1581799096","https://openalex.org/W1964370047","https://openalex.org/W1977756370","https://openalex.org/W2007764832","https://openalex.org/W2019531513","https://openalex.org/W2023998798","https://openalex.org/W2025675183","https://openalex.org/W2040341372","https://openalex.org/W2062412435","https://openalex.org/W2069413021","https://openalex.org/W2070519512","https://openalex.org/W2079848331","https://openalex.org/W2086811304","https://openalex.org/W2093395734","https://openalex.org/W2097706568","https://openalex.org/W2099614849","https://openalex.org/W2128202297","https://openalex.org/W2414562585"],"related_works":["https://openalex.org/W7098773285","https://openalex.org/W1544530309","https://openalex.org/W2086811304","https://openalex.org/W2099614849","https://openalex.org/W1977756370","https://openalex.org/W1987667273","https://openalex.org/W7096820905","https://openalex.org/W7211983801","https://openalex.org/W2107406080","https://openalex.org/W2158345649"],"abstract_inverted_index":{"The":[0,15,79],"nucleotide":[1,57],"sequence":[2,49,61],"of":[3,9,63,68,89,132],"the":[4,31,44,60,64,69,118,133],"small":[5],"(S)":[6],"RNA":[7,48,71],"segment":[8,16],"Akabane":[10],"(AKA)":[11],"bunyavirus":[12,144],"was":[13,124],"determined.":[14],"is":[17,53,76],"858":[18],"nucleotides":[19],"long":[20],"and":[21,34,85,94,117],"contains":[22],"two":[23,74,127],"overlapping":[24],"open":[25],"reading":[26],"frames":[27],"(ORFs),":[28],"which":[29,120],"encode":[30],"nucleocapsid":[32],"(N)":[33],"nonstructural":[35],"(NSs)":[36],"proteins,":[37],"consistent":[38],"with":[39,43],"other":[40],"bunyaviruses.":[41],"Comparisons":[42],"Aino":[45],"virus":[46,91,103,135],"S":[47],"indicated":[50],"that":[51,101],"there":[52],"73.5%":[54],"identity":[55,62],"in":[56,106],"sequence.":[58],"However,":[59],"5'":[65],"non-coding":[66],"region":[67],"genomic":[70],"between":[72],"these":[73],"viruses":[75],"only":[77],"55%.":[78],"N":[80,136],"ORFs":[81],"from":[82],"20":[83],"Japanese":[84],"2":[86],"Australian":[87],"isolates":[88,110,123],"AKA":[90,102,134],"were":[92,111],"sequenced":[93],"subjected":[95],"to":[96],"phylogenetic":[97,130],"analysis.":[98],"This":[99],"suggested":[100],"has":[104],"evolved":[105],"multiple":[107],"lineages.":[108],"Twenty-three":[109],"grouped":[112],"into":[113,126,143],"three":[114],"major":[115],"clusters,":[116],"cluster":[119],"includes":[121],"recent":[122],"subdivided":[125],"branches.":[128],"Thus,":[129],"analysis":[131],"protein":[137],"gene":[138],"gives":[139],"a":[140],"greater":[141],"insight":[142],"evolution.":[145]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":2}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}