{"id":"https://openalex.org/W2122270655","doi":"https://doi.org/10.1093/bioinformatics/btp666","title":"Tablet\u2014next generation sequence assembly visualization","display_name":"Tablet\u2014next generation sequence assembly visualization","publication_year":2009,"publication_date":"2009-12-04","ids":{"openalex":"https://openalex.org/W2122270655","doi":"https://doi.org/10.1093/bioinformatics/btp666","mag":"2122270655","pmid":"https://pubmed.ncbi.nlm.nih.gov/19965881","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/2815658"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btp666","doi":"https://doi.org/10.1093/bioinformatics/btp666","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp666","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/3/401/567576/btp666.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["abdc-a","anvur-class-a","anvur-scientific","ccf-a","cwts-core","doaj","dongbi-b","doyens","jufo-3","ki-jl-2","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/26/3/401/567576/btp666.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022036984","display_name":"Iain Milne","orcid":"https://orcid.org/0000-0002-4126-0859","observed_orcids":["https://orcid.org/0000-0002-4126-0859"]},"institutions":[{"id":"https://openalex.org/I4210125655","display_name":"Biomathematics and Statistics Scotland","ror":"https://ror.org/03jwrz939","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210125655"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Iain Milne","raw_affiliation_strings":["1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK","institution_ids":["https://openalex.org/I4210125655"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028753664","display_name":"Micha Bayer","orcid":"https://orcid.org/0000-0003-0041-3115","observed_orcids":["https://orcid.org/0000-0003-0041-3115"]},"institutions":[{"id":"https://openalex.org/I4210125655","display_name":"Biomathematics and Statistics Scotland","ror":"https://ror.org/03jwrz939","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210125655"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Micha Bayer","raw_affiliation_strings":["1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK","institution_ids":["https://openalex.org/I4210125655"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111997725","display_name":"Linda Cardle","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210125655","display_name":"Biomathematics and Statistics Scotland","ror":"https://ror.org/03jwrz939","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210125655"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Linda Cardle","raw_affiliation_strings":["1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK","institution_ids":["https://openalex.org/I4210125655"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022489667","display_name":"Paul D. Shaw","orcid":"https://orcid.org/0000-0002-0202-1150","observed_orcids":["https://orcid.org/0000-0002-0202-1150"]},"institutions":[{"id":"https://openalex.org/I4210125655","display_name":"Biomathematics and Statistics Scotland","ror":"https://ror.org/03jwrz939","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210125655"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Paul Shaw","raw_affiliation_strings":["1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK","institution_ids":["https://openalex.org/I4210125655"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064574350","display_name":"Gordon Stephen","orcid":"https://orcid.org/0000-0002-3125-8034","observed_orcids":["https://orcid.org/0000-0002-3125-8034"]},"institutions":[{"id":"https://openalex.org/I4210125655","display_name":"Biomathematics and Statistics Scotland","ror":"https://ror.org/03jwrz939","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210125655"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Gordon Stephen","raw_affiliation_strings":["1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK","institution_ids":["https://openalex.org/I4210125655"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112200915","display_name":"Frank Wright","orcid":"https://orcid.org/0009-0009-2050-0436","observed_orcids":["https://orcid.org/0009-0009-2050-0436"]},"institutions":[{"id":"https://openalex.org/I4210125655","display_name":"Biomathematics and Statistics Scotland","ror":"https://ror.org/03jwrz939","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210125655"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Frank Wright","raw_affiliation_strings":["1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK","institution_ids":["https://openalex.org/I4210125655"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038782060","display_name":"David Marshall","orcid":"https://orcid.org/0000-0001-9309-2570","observed_orcids":["https://orcid.org/0000-0001-9309-2570"]},"institutions":[{"id":"https://openalex.org/I4210125655","display_name":"Biomathematics and Statistics Scotland","ror":"https://ror.org/03jwrz939","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210125655"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"David Marshall","raw_affiliation_strings":["1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Genetics Programme and 2 Biomathematics and Statistics Scotland, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK","institution_ids":["https://openalex.org/I4210125655"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5038782060"],"corresponding_institution_ids":["https://openalex.org/I4210125655"],"apc_list":{"value":3989,"currency":"USD","value_usd":3989},"apc_paid":{"value":3989,"currency":"USD","value_usd":3989},"fwci":14.0641,"has_fulltext":true,"cited_by_count":681,"citation_normalized_percentile":{"value":0.99512577,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"26","issue":"3","first_page":"401","last_page":"402"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tablets","display_name":"tablets","score":0.6420000195503235},{"id":"https://openalex.org/keywords/next-generation-sequencing","display_name":"next-generation sequencing","score":0.8450000286102295},{"id":"https://openalex.org/keywords/genome-assembly","display_name":"genome assembly","score":0.546999990940094},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"sequence alignment","score":0.5299999713897705},{"id":"https://openalex.org/keywords/multicore-computing","display_name":"multi-core computing","score":0.5249999761581421},{"id":"https://openalex.org/keywords/memory-efficiency","display_name":"memory efficiency","score":0.921999990940094}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8000345230102539},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.671845555305481},{"id":"https://openalex.org/C146778888","wikidata":"https://www.wikidata.org/wiki/Q836862","display_name":"Installation","level":2,"score":0.6585738062858582},{"id":"https://openalex.org/C515153823","wikidata":"https://www.wikidata.org/wiki/Q14116","display_name":"OS X","level":3,"score":0.6541438102722168},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.5855441689491272},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.577072024345398},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5068133473396301},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.46898916363716125},{"id":"https://openalex.org/C508378895","wikidata":"https://www.wikidata.org/wiki/Q1406","display_name":"Microsoft Windows","level":3,"score":0.4635922312736511},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.11741277575492859},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btp666","doi":"https://doi.org/10.1093/bioinformatics/btp666","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp666","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/3/401/567576/btp666.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["abdc-a","anvur-class-a","anvur-scientific","ccf-a","cwts-core","doaj","dongbi-b","doyens","jufo-3","ki-jl-2","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2815658","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2815658","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmid:19965881","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19965881","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":"Journal Article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.482.9725","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.482.9725","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2009/12/04/bioinformatics.btp666.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.607.1422","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.607.1422","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/26/3/401.full.pdf","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btp666","doi":"https://doi.org/10.1093/bioinformatics/btp666","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp666","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/3/401/567576/btp666.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["abdc-a","anvur-class-a","anvur-scientific","ccf-a","cwts-core","doaj","dongbi-b","doyens","jufo-3","ki-jl-2","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320064","display_name":"Scottish Funding Council","ror":"https://ror.org/056bwcz71"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2122270655.pdf","grobid_xml":"https://content.openalex.org/works/W2122270655.grobid-xml"},"referenced_works_count":6,"referenced_works":["https://openalex.org/W2108234281","https://openalex.org/W2120414630","https://openalex.org/W2127226151","https://openalex.org/W2128114769","https://openalex.org/W2143325524","https://openalex.org/W2164075646"],"related_works":["https://openalex.org/W7095725243","https://openalex.org/W2138618895","https://openalex.org/W2401191482","https://openalex.org/W2060360855","https://openalex.org/W7095078534","https://openalex.org/W2117790023","https://openalex.org/W7097253098","https://openalex.org/W2136805677","https://openalex.org/W2026518597","https://openalex.org/W2143325524"],"abstract_inverted_index":{"SUMMARY:":[0],"Tablet":[1,21,49,73],"is":[2,50,74],"a":[3,15,68],"lightweight,":[4],"high-performance":[5],"graphical":[6],"viewer":[7],"for":[8,77],"next-generation":[9],"sequence":[10],"assemblies":[11,61],"and":[12,35,42,46,54,85,97],"alignments.":[13],"Supporting":[14],"range":[16],"of":[17,40,64],"input":[18],"assembly":[19],"formats,":[20],"provides":[22],"high-quality":[23],"visualizations":[24],"showing":[25],"data":[26,47],"in":[27,95],"packed":[28],"or":[29],"stacked":[30],"views,":[31],"allowing":[32,57],"instant":[33],"access":[34],"navigation":[36],"to":[37,59],"any":[38],"region":[39],"interest,":[41],"whole":[43],"contig":[44],"overviews":[45],"summaries.":[48],"both":[51],"multi-core":[52],"aware":[53],"memory":[55],"efficient,":[56],"it":[58],"handle":[60],"containing":[62],"millions":[63],"reads,":[65],"even":[66],"on":[67],"32-bit":[69],"desktop":[70],"machine.":[71],"AVAILABILITY:":[72],"freely":[75],"available":[76],"Microsoft":[78],"Windows,":[79],"Apple":[80],"Mac":[81],"OS":[82],"X,":[83],"Linux":[84],"Solaris.":[86],"Fully":[87],"bundled":[88],"installers":[89],"can":[90],"be":[91],"downloaded":[92],"from":[93],"http://bioinf.scri.ac.uk/tablet":[94],"32-":[96],"64-bit":[98],"versions.":[99]},"counts_by_year":[{"year":2026,"cited_by_count":11},{"year":2025,"cited_by_count":17},{"year":2024,"cited_by_count":21},{"year":2023,"cited_by_count":22},{"year":2022,"cited_by_count":32},{"year":2021,"cited_by_count":55},{"year":2020,"cited_by_count":32},{"year":2019,"cited_by_count":36},{"year":2018,"cited_by_count":50},{"year":2017,"cited_by_count":41},{"year":2016,"cited_by_count":57},{"year":2015,"cited_by_count":54},{"year":2014,"cited_by_count":46},{"year":2013,"cited_by_count":77},{"year":2012,"cited_by_count":74}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2016-06-24T00:00:00"}
