{"id":"https://openalex.org/W2115115704","doi":"https://doi.org/10.1094/pd-90-0161","title":"Genetic and Pathogenic Variation in Phytophthora cactorum Affecting Fruit and Nut Crops in California","display_name":"Genetic and Pathogenic Variation in Phytophthora cactorum Affecting Fruit and Nut Crops in California","publication_year":2006,"publication_date":"2006-02-01","ids":{"openalex":"https://openalex.org/W2115115704","doi":"https://doi.org/10.1094/pd-90-0161","mag":"2115115704","pmid":"https://pubmed.ncbi.nlm.nih.gov/30786407"},"language":"en","primary_location":{"id":"doi:10.1094/pd-90-0161","doi":"https://doi.org/10.1094/pd-90-0161","is_oa":false,"landing_page_url":"https://doi.org/10.1094/pd-90-0161","pdf_url":null,"source":{"id":"https://openalex.org/S135458494","display_name":"Plant Disease","issn_l":"0191-2917","issn":["0191-2917","1943-7692"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-a","jufo-1","medline","norway-1","poland-70","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320276","host_organization_name":"American Phytopathological Society","host_organization_lineage":["https://openalex.org/P4310320276"],"host_organization_lineage_names":["American Phytopathological Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Disease","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110083880","display_name":"R. G. Bhat","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I84218800","display_name":"University of California, Davis","ror":"https://ror.org/05rrcem69","country_code":"US","type":"education","lineage":["https://openalex.org/I84218800"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R. G. Bhat","raw_affiliation_strings":["Department of Plant Pathology, University of California, Davis 95616"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant Pathology, University of California, Davis 95616","institution_ids":["https://openalex.org/I84218800"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076754007","display_name":"Peter M. Colowit","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I84218800","display_name":"University of California, Davis","ror":"https://ror.org/05rrcem69","country_code":"US","type":"education","lineage":["https://openalex.org/I84218800"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P. M. Colowit","raw_affiliation_strings":["United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Crops Pathology and Genetics Research Unit (CPGRU), Department of Plant Sciences, University of California, Davis 95616"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Crops Pathology and Genetics Research Unit (CPGRU), Department of Plant Sciences, University of California, Davis 95616","institution_ids":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I84218800"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055244396","display_name":"Thomas H. Tai","orcid":"https://orcid.org/0000-0003-2347-3110","observed_orcids":["https://orcid.org/0000-0003-2347-3110"]},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I84218800","display_name":"University of California, Davis","ror":"https://ror.org/05rrcem69","country_code":"US","type":"education","lineage":["https://openalex.org/I84218800"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"T. H. Tai","raw_affiliation_strings":["United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Crops Pathology and Genetics Research Unit (CPGRU), Department of Plant Sciences, University of California, Davis 95616"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Crops Pathology and Genetics Research Unit (CPGRU), Department of Plant Sciences, University of California, Davis 95616","institution_ids":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I84218800"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025152642","display_name":"Mallikarjuna K. Aradhya","orcid":"https://orcid.org/0000-0002-2118-7885","observed_orcids":["https://orcid.org/0000-0002-2118-7885"]},"institutions":[{"id":"https://openalex.org/I4210109795","display_name":"National Clonal Germplasm Repository","ror":"https://ror.org/01wwwqd52","country_code":"US","type":"archive","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210094889","https://openalex.org/I4210109795"]},{"id":"https://openalex.org/I84218800","display_name":"University of California, Davis","ror":"https://ror.org/05rrcem69","country_code":"US","type":"education","lineage":["https://openalex.org/I84218800"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. K. Aradhya","raw_affiliation_strings":["USDA-ARS National Clonal Germplasm Repository, University of California, Davis 95616"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"USDA-ARS National Clonal Germplasm Repository, University of California, Davis 95616","institution_ids":["https://openalex.org/I4210109795","https://openalex.org/I84218800"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005374315","display_name":"Greg T. Browne","orcid":"https://orcid.org/0000-0002-1225-6869","observed_orcids":["https://orcid.org/0000-0002-1225-6869"]},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I84218800","display_name":"University of California, Davis","ror":"https://ror.org/05rrcem69","country_code":"US","type":"education","lineage":["https://openalex.org/I84218800"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"G. T. Browne","raw_affiliation_strings":["USDA-ARS, CPGRU, Department of Plant Pathology, University of California, Davis, CA 95616"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"USDA-ARS, CPGRU, Department of Plant Pathology, University of California, Davis, CA 95616","institution_ids":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I84218800"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":5.1146,"has_fulltext":false,"cited_by_count":48,"citation_normalized_percentile":{"value":0.94784423,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"90","issue":"2","first_page":"161","last_page":"169"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11771","display_name":"Plant Pathogens and Resistance","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11771","display_name":"Plant Pathogens and Resistance","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11900","display_name":"Fungal Plant Pathogen Control","score":0.0007999999797903001,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phytophthora-cactorum","display_name":"Phytophthora cactorum","score":1.0},{"id":"https://openalex.org/keywords/genetic-variation","display_name":"genetic variation","score":0.7789999842643738},{"id":"https://openalex.org/keywords/pathogenicity","display_name":"pathogenicity","score":0.8840000033378601},{"id":"https://openalex.org/keywords/host-specificity","display_name":"host specificity","score":0.9589999914169312},{"id":"https://openalex.org/keywords/almond","display_name":"almond","score":0.6710000038146973},{"id":"https://openalex.org/keywords/strawberry","display_name":"strawberry","score":0.996999979019165},{"id":"https://openalex.org/keywords/walnut","display_name":"Juglans regia","score":0.9860000014305115},{"id":"https://openalex.org/keywords/aflp","display_name":"AFLP","score":0.4059999883174896},{"id":"https://openalex.org/keywords/population-structure","display_name":"population structure","score":0.43700000643730164},{"id":"https://openalex.org/keywords/geographical-origin","display_name":"geographical origin","score":0.4169999957084656},{"id":"https://openalex.org/keywords/disease-management","display_name":"disease management","score":0.5899999737739563},{"id":"https://openalex.org/keywords/california","display_name":"California","score":0.656000018119812}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9382414817810059},{"id":"https://openalex.org/C2778783267","wikidata":"https://www.wikidata.org/wiki/Q2230727","display_name":"Phytophthora cactorum","level":3,"score":0.8920384645462036},{"id":"https://openalex.org/C206391251","wikidata":"https://www.wikidata.org/wiki/Q1186738","display_name":"Nut","level":2,"score":0.7968758344650269},{"id":"https://openalex.org/C68873052","wikidata":"https://www.wikidata.org/wiki/Q349856","display_name":"Genetic variation","level":3,"score":0.5593208074569702},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.4376294016838074},{"id":"https://openalex.org/C144027150","wikidata":"https://www.wikidata.org/wiki/Q48803","display_name":"Horticulture","level":1,"score":0.4085986614227295},{"id":"https://openalex.org/C2780100698","wikidata":"https://www.wikidata.org/wiki/Q311294","display_name":"Phytophthora","level":2,"score":0.3460594415664673},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.32771939039230347},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1496238112449646},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10997307300567627},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C66938386","wikidata":"https://www.wikidata.org/wiki/Q633538","display_name":"Structural engineering","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1094/pd-90-0161","doi":"https://doi.org/10.1094/pd-90-0161","is_oa":false,"landing_page_url":"https://doi.org/10.1094/pd-90-0161","pdf_url":null,"source":{"id":"https://openalex.org/S135458494","display_name":"Plant Disease","issn_l":"0191-2917","issn":["0191-2917","1943-7692"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-a","jufo-1","medline","norway-1","poland-70","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320276","host_organization_name":"American Phytopathological Society","host_organization_lineage":["https://openalex.org/P4310320276"],"host_organization_lineage_names":["American Phytopathological Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Disease","raw_type":"journal-article"},{"id":"pmid:30786407","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30786407","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant disease","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.875,"id":"https://metadata.un.org/sdg/2"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":44,"referenced_works":["https://openalex.org/W131207381","https://openalex.org/W986587683","https://openalex.org/W1566107011","https://openalex.org/W1566507401","https://openalex.org/W1919772617","https://openalex.org/W1967365056","https://openalex.org/W1977161596","https://openalex.org/W1978798645","https://openalex.org/W1980364633","https://openalex.org/W1981256657","https://openalex.org/W1982421164","https://openalex.org/W1994231576","https://openalex.org/W2000425514","https://openalex.org/W2001184082","https://openalex.org/W2004752317","https://openalex.org/W2013222200","https://openalex.org/W2018626064","https://openalex.org/W2032424288","https://openalex.org/W2034134128","https://openalex.org/W2035605042","https://openalex.org/W2038594745","https://openalex.org/W2053101582","https://openalex.org/W2059283317","https://openalex.org/W2064647185","https://openalex.org/W2076173400","https://openalex.org/W2101138250","https://openalex.org/W2122843362","https://openalex.org/W2133371031","https://openalex.org/W2139267142","https://openalex.org/W2139497287","https://openalex.org/W2145250710","https://openalex.org/W2148378756","https://openalex.org/W2153707098","https://openalex.org/W2161863335","https://openalex.org/W2167430742","https://openalex.org/W2167974162","https://openalex.org/W2197672337","https://openalex.org/W2252434381","https://openalex.org/W2326203934","https://openalex.org/W2403669557","https://openalex.org/W2479621429","https://openalex.org/W2586450027","https://openalex.org/W4235047015","https://openalex.org/W6804563512"],"related_works":["https://openalex.org/W2044410093","https://openalex.org/W2145250710","https://openalex.org/W2122843362","https://openalex.org/W2053101582","https://openalex.org/W3186984506","https://openalex.org/W2133371031","https://openalex.org/W2610402162","https://openalex.org/W2000425514","https://openalex.org/W2060776185","https://openalex.org/W2110153920"],"abstract_inverted_index":{"Isolates":[0],"of":[1,8,33,53,74,81,89,93,102,108,119,124,138,148,173,192,211,226,232,242,245,262,273],"Phytophthora":[2,9,56,63],"cactorum":[3,35,150,194,234,264,275,299],"and":[4,18,45,50,106,116,200,240,282,303],"15":[5,54],"other":[6,48,55,197,249],"species":[7],"were":[10,65,219,238,265],"characterized":[11],"according":[12],"to":[13,20,267],"their":[14],"genomic":[15,291],"DNA,":[16],"pathogenicity,":[17],"sensitivity":[19],"mefenoxam.":[21],"Amplified":[22],"fragment":[23],"length":[24],"polymorphism":[25],"(AFLP)":[26],"analysis":[27,73],"was":[28,112,127],"completed":[29],"for":[30,169,310],"132":[31,100,260],"isolates":[32,52,88,101,147,191,214,231,244,261],"P.":[34,90,103,149,193,233,263,274,298],"(30":[36],"from":[37,40,43,47,58,151,195,203,215,236,248],"almond,":[38],"86":[39,146],"strawberry,":[41,152],"5":[42],"walnut,":[44],"11":[46],"hosts)":[49],"22":[51],"spp.":[57,64],"various":[59],"hosts.":[60],"All":[61,259],"16":[62],"distinguishable":[66],"by":[67,154],"unique":[68],"AFLP":[69,76,110],"banding":[70],"patterns.":[71],"Cluster":[72],"the":[75,109,125,139,145,157,174,246,256],"data":[77],"revealed":[78],"high":[79],"coefficients":[80],"genetic":[82,294],"similarity":[83],"(>0.9)":[84],"among":[85,98],"all":[86,99,230],"California":[87,277],"cactorum.":[91],"Analysis":[92],"molecular":[94],"variance":[95],"indicated":[96],"that,":[97],"cactorum,":[104],"30.8":[105],"24.5%":[107],"variation":[111,126,175,289,295],"associated":[113,128],"with":[114,129,286],"hosts":[115,196,250],"geographical":[117,302],"sources":[118],"isolates,":[120],"respectively,":[121],"whereas":[122],"15.0%":[123],"isolate":[130,202],"niche":[131],"(i.e.,":[132,160],"an":[133,201],"aerial":[134],"plant":[135,164],"part,":[136],"portion":[137],"root":[140,217],"system,":[141],"or":[142,163],"soil).":[143],"Among":[144],"characterization":[153],"source":[155],"in":[156,188,276,290,297],"production":[158],"system":[159],"fruiting":[161],"field":[162],"nursery)":[165],"did":[166],"not":[167],"account":[168],"a":[170,189,204],"significant":[171,301],"proportion":[172],"(0.6%,":[176],"P":[177],"=":[178],"0.204).":[179],"In":[180],"pathogenicity":[181],"tests":[182],"on":[183],"strawberry":[184,199,205,216],"plants":[185],"(cv.":[186,228],"Diamante)":[187],"greenhouse,":[190],"than":[198,255],"fruit":[206],"caused":[207,251],"only":[208],"negligible":[209],"amounts":[210],"disease,":[212],"but":[213],"systems":[218],"highly":[220],"aggressive.":[221],"On":[222],"excised":[223],"shoot":[224],"segments":[225],"almond":[227,237,257],"Drake),":[229],"originally":[235],"pathogenic,":[239],"8":[241],"17":[243],"pathogen":[247],"significantly":[252],"less":[253],"disease":[254,311],"isolates.":[258],"sensitive":[266,281],"mefenoxam":[268,280],"at":[269],"1":[270],"ppm.":[271],"Populations":[272],"apparently":[278],"are":[279],"exhibit":[283],"host":[284,304],"specificity":[285],"relatively":[287],"minor":[288],"DNA.":[292],"The":[293],"observed":[296],"included":[300],"origin":[305],"components,":[306],"which":[307],"has":[308],"implications":[309],"management":[312],"approaches.":[313]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2016-06-24T00:00:00"}
