{"id":"https://openalex.org/W2107124181","doi":"https://doi.org/10.1099/ijs.0.63211-0","title":"Haloferax sulfurifontis sp. nov., a halophilic archaeon isolated from a sulfide- and sulfur-rich spring","display_name":"Haloferax sulfurifontis sp. nov., a halophilic archaeon isolated from a sulfide- and sulfur-rich spring","publication_year":2004,"publication_date":"2004-11-01","ids":{"openalex":"https://openalex.org/W2107124181","doi":"https://doi.org/10.1099/ijs.0.63211-0","mag":"2107124181","pmid":"https://pubmed.ncbi.nlm.nih.gov/15545470"},"language":"en","primary_location":{"id":"doi:10.1099/ijs.0.63211-0","doi":"https://doi.org/10.1099/ijs.0.63211-0","is_oa":false,"landing_page_url":"https://doi.org/10.1099/ijs.0.63211-0","pdf_url":null,"source":{"id":"https://openalex.org/S102181007","display_name":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","issn_l":"1466-5026","issn":["1466-5026","1466-5034"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Systematic and Evolutionary Microbiology","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038529807","display_name":"Mostafa S. Elshahed","orcid":"https://orcid.org/0000-0002-1067-1647","observed_orcids":["https://orcid.org/0000-0002-1067-1647"]},"institutions":[{"id":"https://openalex.org/I8692664","display_name":"University of Oklahoma","ror":"https://ror.org/02aqsxs83","country_code":"US","type":"education","lineage":["https://openalex.org/I8692664"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mostafa S. Elshahed","raw_affiliation_strings":["Department of Botany and Microbiology, and Institute of Energy and the Environment, University of Oklahoma, Norman, OK 73019, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Botany and Microbiology, and Institute of Energy and the Environment, University of Oklahoma, Norman, OK 73019, USA","institution_ids":["https://openalex.org/I8692664"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042737327","display_name":"Kristen N. Savage","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I8692664","display_name":"University of Oklahoma","ror":"https://ror.org/02aqsxs83","country_code":"US","type":"education","lineage":["https://openalex.org/I8692664"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kristen N. Savage","raw_affiliation_strings":["Department of Botany and Microbiology, and Institute of Energy and the Environment, University of Oklahoma, Norman, OK 73019, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Botany and Microbiology, and Institute of Energy and the Environment, University of Oklahoma, Norman, OK 73019, USA","institution_ids":["https://openalex.org/I8692664"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090164792","display_name":"Aharon Oren","orcid":"https://orcid.org/0000-0002-5828-0995","observed_orcids":["https://orcid.org/0000-0002-5828-0995"]},"institutions":[{"id":"https://openalex.org/I197251160","display_name":"Hebrew University of Jerusalem","ror":"https://ror.org/03qxff017","country_code":"IL","type":"education","lineage":["https://openalex.org/I197251160"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Aharon Oren","raw_affiliation_strings":["The Institute of Life Sciences and the Moshe Shilo Minerva Center for Marine Biogeochemistry, The Hebrew University of Jerusalem, Jerusalem, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Institute of Life Sciences and the Moshe Shilo Minerva Center for Marine Biogeochemistry, The Hebrew University of Jerusalem, Jerusalem, Israel","institution_ids":["https://openalex.org/I197251160"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108727892","display_name":"M. C. Guti\u00e9rrez","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I79238269","display_name":"Universidad de Sevilla","ror":"https://ror.org/03yxnpp24","country_code":"ES","type":"education","lineage":["https://openalex.org/I79238269"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"M. Carmen Gutierrez","raw_affiliation_strings":["Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain","institution_ids":["https://openalex.org/I79238269"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026775996","display_name":"Ant\u00f3nio Ventosa","orcid":"https://orcid.org/0000-0002-7573-0556","observed_orcids":["https://orcid.org/0000-0002-7573-0556"]},"institutions":[{"id":"https://openalex.org/I79238269","display_name":"Universidad de Sevilla","ror":"https://ror.org/03yxnpp24","country_code":"ES","type":"education","lineage":["https://openalex.org/I79238269"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Antonio Ventosa","raw_affiliation_strings":["Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain","institution_ids":["https://openalex.org/I79238269"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042151404","display_name":"Lee R. Krumholz","orcid":"https://orcid.org/0000-0002-7301-0758","observed_orcids":["https://orcid.org/0000-0002-7301-0758"]},"institutions":[{"id":"https://openalex.org/I8692664","display_name":"University of Oklahoma","ror":"https://ror.org/02aqsxs83","country_code":"US","type":"education","lineage":["https://openalex.org/I8692664"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lee R. Krumholz","raw_affiliation_strings":["Department of Botany and Microbiology, and Institute of Energy and the Environment, University of Oklahoma, Norman, OK 73019, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Botany and Microbiology, and Institute of Energy and the Environment, University of Oklahoma, Norman, OK 73019, USA","institution_ids":["https://openalex.org/I8692664"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.5202,"has_fulltext":false,"cited_by_count":60,"citation_normalized_percentile":{"value":0.87986434,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"54","issue":"6","first_page":"2275","last_page":"2279"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.8339999914169312,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.8339999914169312,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.11599999666213989,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11073","display_name":"Metal Extraction and Bioleaching","score":0.00570000009611249,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/new-species","display_name":"new species","score":0.7369999885559082}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8218936324119568},{"id":"https://openalex.org/C2776509742","wikidata":"https://www.wikidata.org/wiki/Q764133","display_name":"Halobacteriaceae","level":5,"score":0.735636830329895},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.723751425743103},{"id":"https://openalex.org/C80642116","wikidata":"https://www.wikidata.org/wiki/Q946633","display_name":"Halophile","level":3,"score":0.6440681219100952},{"id":"https://openalex.org/C2778022156","wikidata":"https://www.wikidata.org/wiki/Q576145","display_name":"Strain (injury)","level":2,"score":0.624381422996521},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.5579337477684021},{"id":"https://openalex.org/C518881349","wikidata":"https://www.wikidata.org/wiki/Q682","display_name":"Sulfur","level":2,"score":0.507607102394104},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.504972517490387},{"id":"https://openalex.org/C550995028","wikidata":"https://www.wikidata.org/wiki/Q10872","display_name":"Archaea","level":3,"score":0.46358394622802734},{"id":"https://openalex.org/C93642007","wikidata":"https://www.wikidata.org/wiki/Q5422399","display_name":"Extreme environment","level":3,"score":0.4493924081325531},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.34002387523651123},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.15279319882392883},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.06458887457847595},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.05353128910064697},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C2778113554","wikidata":"https://www.wikidata.org/wiki/Q3782756","display_name":"Halobacterium salinarum","level":4,"score":0.0}],"mesh":[{"descriptor_ui":"D000693","descriptor_name":"Anaerobiosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001482","descriptor_name":"Base Composition","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004275","descriptor_name":"DNA, Ribosomal","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D004275","descriptor_name":"DNA, Ribosomal","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D005618","descriptor_name":"Fresh Water","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D008055","descriptor_name":"Lipids","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008055","descriptor_name":"Lipids","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009693","descriptor_name":"Nucleic Acid Hybridization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009825","descriptor_name":"Oklahoma","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010084","descriptor_name":"Oxidation-Reduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010860","descriptor_name":"Pigments, Biological","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012462","descriptor_name":"Saline Solution, Hypertonic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013440","descriptor_name":"Sulfides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013455","descriptor_name":"Sulfur","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014871","descriptor_name":"Water Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015636","descriptor_name":"Magnesium Chloride","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019621","descriptor_name":"Haloferax","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D019621","descriptor_name":"Haloferax","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019621","descriptor_name":"Haloferax","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":true},{"descriptor_ui":"D019621","descriptor_name":"Haloferax","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D019641","descriptor_name":"DNA, Archaeal","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D019641","descriptor_name":"DNA, Archaeal","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D019642","descriptor_name":"RNA, Archaeal","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020459","descriptor_name":"Genes, rRNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1099/ijs.0.63211-0","doi":"https://doi.org/10.1099/ijs.0.63211-0","is_oa":false,"landing_page_url":"https://doi.org/10.1099/ijs.0.63211-0","pdf_url":null,"source":{"id":"https://openalex.org/S102181007","display_name":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","issn_l":"1466-5026","issn":["1466-5026","1466-5034"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310320497","host_organization_name":"Microbiology Society","host_organization_lineage":["https://openalex.org/P4310320497"],"host_organization_lineage_names":["Microbiology Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Systematic and Evolutionary Microbiology","raw_type":"journal-article"},{"id":"pmid:15545470","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15545470","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International journal of systematic and evolutionary microbiology","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W602436075","https://openalex.org/W1560139137","https://openalex.org/W1596926104","https://openalex.org/W1789242594","https://openalex.org/W1982749907","https://openalex.org/W1982847869","https://openalex.org/W1995073159","https://openalex.org/W2007703737","https://openalex.org/W2042550927","https://openalex.org/W2061016039","https://openalex.org/W2065068755","https://openalex.org/W2086609801","https://openalex.org/W2091664418","https://openalex.org/W2097382368","https://openalex.org/W2100156669","https://openalex.org/W2103516382","https://openalex.org/W2104688577","https://openalex.org/W2109473335","https://openalex.org/W2121253261","https://openalex.org/W2142066448","https://openalex.org/W2149155835","https://openalex.org/W2151285216","https://openalex.org/W3142525956"],"related_works":["https://openalex.org/W3204515628","https://openalex.org/W2154960111","https://openalex.org/W2162333493","https://openalex.org/W2129980387","https://openalex.org/W2790209037","https://openalex.org/W2096539003","https://openalex.org/W2035435282","https://openalex.org/W2167812153","https://openalex.org/W2152733945","https://openalex.org/W2198917236"],"abstract_inverted_index":{"A":[0,149],"pleomorphic,":[1],"extremely":[2],"halophilic":[3],"archaeon":[4],"(strain":[5],"M6(T))":[6],"was":[7,56],"isolated":[8],"from":[9,142],"a":[10,35],"sulfide-":[11],"and":[12,45,95,112,133],"sulfur-rich":[13],"spring":[14],"in":[15,34,122],"south-western":[16],"Oklahoma":[17],"(USA).":[18],"It":[19],"formed":[20],"small":[21],"(0.8-1.0":[22],"mm),":[23],"salmon":[24],"pink,":[25],"elevated":[26],"colonies":[27],"on":[28],"agar":[29],"medium.":[30],"The":[31,163],"strain":[32,71,120,137,165],"grew":[33],"wide":[36],"range":[37],"of":[38,88,119,145],"NaCl":[39],"concentrations":[40],"(6":[41],"%":[42,83,97],"to":[43,58,61,74,85,99,139,159],"saturation)":[44],"required":[46],"at":[47],"least":[48],"1":[49],"mM":[50],"Mg(2+)":[51],"for":[52],"growth.":[53],"Strain":[54],"M6(T)":[55,72,121,138,167],"able":[57],"reduce":[59],"sulfur":[60],"sulfide":[62],"anaerobically.":[63],"16S":[64],"rRNA":[65],"gene":[66],"sequence":[67],"analysis":[68,111],"indicated":[69],"that":[70],"belongs":[73],"the":[75,89,106,123,146,161],"family":[76],"Halobacteriaceae,":[77],"genus":[78,90,107,124,147],"Haloferax;":[79],"it":[80],"showed":[81],"96.7-98.0":[82],"similarity":[84,98],"other":[86,143],"members":[87,144],"with":[91],"validly":[92],"published":[93],"names":[94],"89":[96],"Halogeometricum":[100],"borinquense,":[101],"its":[102],"closest":[103],"relative":[104],"outside":[105],"Haloferax.":[108,125,148],"Polar":[109],"lipid":[110],"DNA":[113],"G+C":[114],"content":[115],"further":[116],"supported":[117],"placement":[118],"DNA-DNA":[126],"hybridization":[127],"values,":[128],"as":[129,131],"well":[130],"biochemical":[132],"physiological":[134],"characterization,":[135],"allowed":[136],"be":[140],"differentiated":[141],"novel":[150],"species,":[151],"Haloferax":[152],"sulfurifontis":[153],"sp.":[154],"nov.,":[155],"is":[156,166],"therefore":[157],"proposed":[158],"accommodate":[160],"strain.":[162],"type":[164],"(=JCM":[168],"12327(T)=CCM":[169],"7217(T)=DSM":[170],"16227(T)=CIP":[171],"108334(T)).":[172]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":4}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}