{"id":"https://openalex.org/W2106830506","doi":"https://doi.org/10.1093/jb/mvi111","title":"Expression and Molecular Characterization of Spherical Particles Derived from the Genome of the Hyperthermophilic Euryarchaeote Pyrococcus furiosus","display_name":"Expression and Molecular Characterization of Spherical Particles Derived from the Genome of the Hyperthermophilic Euryarchaeote Pyrococcus furiosus","publication_year":2005,"publication_date":"2005-08-01","ids":{"openalex":"https://openalex.org/W2106830506","doi":"https://doi.org/10.1093/jb/mvi111","mag":"2106830506","pmid":"https://pubmed.ncbi.nlm.nih.gov/16091594"},"language":"en","primary_location":{"id":"doi:10.1093/jb/mvi111","doi":"https://doi.org/10.1093/jb/mvi111","is_oa":false,"landing_page_url":"https://doi.org/10.1093/jb/mvi111","pdf_url":null,"source":{"id":"https://openalex.org/S184547178","display_name":"The Journal of Biochemistry","issn_l":"0021-924X","issn":["0021-924X","1756-2651"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-2"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of Biochemistry","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103804392","display_name":"Kazunori Namba","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4405286456","display_name":"Institute for Protein Research, The University of Osaka","ror":"https://ror.org/0268snt13","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4405286456","https://openalex.org/I98285908"]},{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Kazunori Namba","raw_affiliation_strings":["Institute for Protein Research, Osaka University, Suita, Osaka"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Protein Research, Osaka University, Suita, Osaka","institution_ids":["https://openalex.org/I4405286456","https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105936854","display_name":"Kyoji Hagiwara","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1323638106","display_name":"National Agriculture and Food Research Organization","ror":"https://ror.org/023v4bd62","country_code":"JP","type":"government","lineage":["https://openalex.org/I1323638106"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kyoji Hagiwara","raw_affiliation_strings":["National Agriculture and Food Research Organization"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Agriculture and Food Research Organization","institution_ids":["https://openalex.org/I1323638106"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100764564","display_name":"Hideaki Tanaka","orcid":"https://orcid.org/0000-0003-2035-954X","observed_orcids":["https://orcid.org/0000-0003-2035-954X"]},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hideaki Tanaka","raw_affiliation_strings":["Osaka University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Osaka University","institution_ids":["https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032018034","display_name":"Yuichiro Nakaishi","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yuichiro Nakaishi","raw_affiliation_strings":["Osaka University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Osaka University","institution_ids":["https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036653863","display_name":"Khoon Tee Chong","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Khoon Tee Chong","raw_affiliation_strings":["Osaka University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Osaka University","institution_ids":["https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005727731","display_name":"Eiki Yamashita","orcid":"https://orcid.org/0000-0002-4278-0039","observed_orcids":["https://orcid.org/0000-0002-4278-0039"]},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Eiki Yamashita","raw_affiliation_strings":["Osaka University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Osaka University","institution_ids":["https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111563648","display_name":"George Enyimah Armah","orcid":"https://orcid.org/0000-0001-6078-9953","observed_orcids":["https://orcid.org/0000-0001-6078-9953"]},"institutions":[{"id":"https://openalex.org/I138690464","display_name":"University of Ghana","ror":"https://ror.org/01r22mr83","country_code":"GH","type":"education","lineage":["https://openalex.org/I138690464"]},{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["GH","JP"],"is_corresponding":false,"raw_author_name":"George Enyimah Armah","raw_affiliation_strings":["Osaka University","University of Ghana"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Osaka University","institution_ids":["https://openalex.org/I98285908"]},{"raw_affiliation_string":"University of Ghana","institution_ids":["https://openalex.org/I138690464"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Yasuko Ono","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yasuko Ono","raw_affiliation_strings":["Osaka University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Osaka University","institution_ids":["https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045012147","display_name":"Yoshizumi Ishino","orcid":"https://orcid.org/0000-0001-9419-0826","observed_orcids":["https://orcid.org/0000-0001-9419-0826"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yoshizumi Ishino","raw_affiliation_strings":["Molecular Biosciences"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular Biosciences","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012091566","display_name":"Toshihiro Omura","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1323638106","display_name":"National Agriculture and Food Research Organization","ror":"https://ror.org/023v4bd62","country_code":"JP","type":"government","lineage":["https://openalex.org/I1323638106"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Toshihiro Omura","raw_affiliation_strings":["National Agriculture and Food Research Organization"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Agriculture and Food Research Organization","institution_ids":["https://openalex.org/I1323638106"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080888597","display_name":"Tomitake Tsukihara A","orcid":"https://orcid.org/0000-0002-9478-0954","observed_orcids":["https://orcid.org/0000-0002-9478-0954"]},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tomitake Tsukihara","raw_affiliation_strings":["Osaka University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Osaka University","institution_ids":["https://openalex.org/I98285908"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006122700","display_name":"Atsushi Nakagawa","orcid":"https://orcid.org/0000-0002-1700-7861","observed_orcids":["https://orcid.org/0000-0002-1700-7861"]},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Atsushi Nakagawa","raw_affiliation_strings":["Osaka University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Osaka University","institution_ids":["https://openalex.org/I98285908"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5103804392"],"corresponding_institution_ids":["https://openalex.org/I4405286456","https://openalex.org/I98285908"],"apc_list":{"value":3276,"currency":"USD","value_usd":3276},"apc_paid":null,"fwci":0.2065,"has_fulltext":false,"cited_by_count":22,"citation_normalized_percentile":{"value":0.45881541,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"138","issue":"2","first_page":"193","last_page":"199"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.33079999685287476,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.33079999685287476,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10934","display_name":"Heat shock proteins research","score":0.12160000205039978,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.10599999874830246,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/spherical-particles","display_name":"spherical particles","score":0.8080000281333923},{"id":"https://openalex.org/keywords/pyrococcus-furiosus","display_name":"Pyrococcus furiosus","score":0.9980000257492065},{"id":"https://openalex.org/keywords/hyperthermophilic-archaea","display_name":"hyperthermophilic archaea","score":0.9679999947547913},{"id":"https://openalex.org/keywords/protein-expression","display_name":"protein expression","score":0.4659999907016754},{"id":"https://openalex.org/keywords/gene-transfer","display_name":"gene transfer","score":0.33000001311302185},{"id":"https://openalex.org/keywords/protein-homology","display_name":"protein homology","score":0.5690000057220459},{"id":"https://openalex.org/keywords/archaeal-genomes","display_name":"archaeal genomes","score":0.699999988079071},{"id":"https://openalex.org/keywords/escherichia-coli-expression","display_name":"Escherichia coli expression","score":0.640999972820282}],"concepts":[{"id":"https://openalex.org/C2776943354","wikidata":"https://www.wikidata.org/wiki/Q146310","display_name":"Pyrococcus furiosus","level":4,"score":0.7598703503608704},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.44732069969177246},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.3490433096885681},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3271401524543762},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2524389624595642},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15959256887435913},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1295793652534485},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12044224143028259},{"id":"https://openalex.org/C550995028","wikidata":"https://www.wikidata.org/wiki/Q10872","display_name":"Archaea","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011994","descriptor_name":"Recombinant Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D019641","descriptor_name":"DNA, Archaeal","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D019843","descriptor_name":"Archaeal Proteins","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D019843","descriptor_name":"Archaeal Proteins","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D019843","descriptor_name":"Archaeal Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D020027","descriptor_name":"Pyrococcus furiosus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020027","descriptor_name":"Pyrococcus furiosus","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/jb/mvi111","doi":"https://doi.org/10.1093/jb/mvi111","is_oa":false,"landing_page_url":"https://doi.org/10.1093/jb/mvi111","pdf_url":null,"source":{"id":"https://openalex.org/S184547178","display_name":"The Journal of Biochemistry","issn_l":"0021-924X","issn":["0021-924X","1756-2651"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-2"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of Biochemistry","raw_type":"journal-article"},{"id":"pmid:16091594","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16091594","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biochemistry","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1920997760","https://openalex.org/W1952527342","https://openalex.org/W1975085160","https://openalex.org/W1975349701","https://openalex.org/W1980514173","https://openalex.org/W1985638505","https://openalex.org/W2031716090","https://openalex.org/W2036821612","https://openalex.org/W2106712618","https://openalex.org/W2119481297","https://openalex.org/W2121764497","https://openalex.org/W2157615781","https://openalex.org/W2158714788","https://openalex.org/W4301404733"],"related_works":["https://openalex.org/W2307360660","https://openalex.org/W7098420015","https://openalex.org/W1984388455","https://openalex.org/W2040234570","https://openalex.org/W2133698816","https://openalex.org/W2156443150","https://openalex.org/W2113150793","https://openalex.org/W2336210816","https://openalex.org/W202251083","https://openalex.org/W1977347544"],"abstract_inverted_index":{"Spherical":[0],"particles":[1],"(SPs)":[2],"of":[3,26,35,45,51,60,72,134,152,162,174],"approximately":[4],"30":[5],"nm":[6],"in":[7,11,87,107,116],"diameter":[8],"were":[9,24,41,142],"found":[10,106],"the":[12,36,46,52,58,65,70,80,83,93,111,117,120,137,155,160,172],"hyperthermophilic":[13],"archaeon":[14],"Pyrococcus":[15],"furiosus.":[16,74,109,176],"The":[17,31],"SPs":[18,102],"contained":[19],"no":[20],"nucleic":[21],"acid":[22,33,49,114],"and":[23,38,98],"composed":[25],"a":[27,163],"single":[28],"39-kDa":[29],"protein.":[30],"amino":[32,48,113,123],"sequences":[34],"amino-terminal":[37,121],"internal":[39],"fragments":[40],"identical":[42],"to":[43,104,128,146],"portions":[44],"deduced":[47],"sequence":[50],"putative":[53,129,147],"38.7-kDa":[54,84,118],"protein":[55,66,85],"encoded":[56],"by":[57,79],"genome":[59,71,173],"P.":[61,73,108,175],"furiosus,":[62],"suggesting":[63],"that":[64,82,166],"was":[67,77,167],"expressed":[68,86],"from":[69,131,149],"This":[75],"possibility":[76],"confirmed":[78],"observation":[81],"Escherichia":[88],"coli":[89],"reacted":[90],"specifically":[91],"with":[92],"antibody":[94],"against":[95],"purified":[96],"SPs,":[97],"it":[99],"also":[100],"formed":[101],"similar":[103],"those":[105],"Of":[110],"345":[112],"residues":[115,141],"protein,":[119],"100":[122],"acids":[124],"exhibited":[125],"strong":[126],"homology":[127],"proteins":[130,148],"other":[132,150],"species":[133],"Pyrococcus,":[135],"while":[136],"remaining":[138],"245":[139],"carboxy-terminal":[140,156],"not":[143],"significantly":[144],"homologous":[145],"members":[151],"archaea.":[153],"Thus,":[154],"region":[157],"might":[158],"be":[159],"product":[161],"foreign":[164],"gene":[165],"incorporated":[168],"relatively":[169],"recently":[170],"into":[171]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":5},{"year":2023,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2016-06-24T00:00:00"}
