{"id":"https://openalex.org/W2097636474","doi":"https://doi.org/10.1109/tcad.2005.855946","title":"FFTSVD: A Fast Multiscale Boundary-Element Method Solver Suitable for Bio-MEMS and Biomolecule Simulation","display_name":"FFTSVD: A Fast Multiscale Boundary-Element Method Solver Suitable for Bio-MEMS and Biomolecule Simulation","publication_year":2006,"publication_date":"2006-01-25","ids":{"openalex":"https://openalex.org/W2097636474","doi":"https://doi.org/10.1109/tcad.2005.855946","mag":"2097636474"},"language":"en","primary_location":{"id":"doi:10.1109/tcad.2005.855946","doi":"https://doi.org/10.1109/tcad.2005.855946","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcad.2005.855946","pdf_url":null,"source":{"id":"https://openalex.org/S100835903","display_name":"IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems","issn_l":"0278-0070","issn":["0278-0070","1937-4151"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["ccf-a","cwts-core","dongbi-a","jufo-2","norway-1","poland-100","russia-white-list-1"],"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081682934","display_name":"Michael D. Altman","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M.D. Altman","raw_affiliation_strings":["Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA, USA","Massachusetts Institute of Technology"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA, USA","institution_ids":["https://openalex.org/I63966007"]},{"raw_affiliation_string":"Massachusetts Institute of Technology","institution_ids":["https://openalex.org/I63966007"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021584861","display_name":"Jaydeep P. Bardhan","orcid":"https://orcid.org/0000-0002-6051-8499","observed_orcids":["https://orcid.org/0000-0002-6051-8499"]},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J.P. Bardhan","raw_affiliation_strings":["Department of Electrical Engineering & Computer Science, Massachusetts Institute of Technology, Cambridge, MA, USA","Massachusetts Institute of Technology"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering & Computer Science, Massachusetts Institute of Technology, Cambridge, MA, USA","institution_ids":["https://openalex.org/I63966007"]},{"raw_affiliation_string":"Massachusetts Institute of Technology","institution_ids":["https://openalex.org/I63966007"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028186526","display_name":"Bruce Tidor","orcid":"https://orcid.org/0000-0002-3320-3969","observed_orcids":["https://orcid.org/0000-0002-3320-3969"]},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B. Tidor","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science and the Biological Engineering Division, Massachusetts Institute of Technology, Cambridge, MA, USA","Massachusetts Institute of Technology"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science and the Biological Engineering Division, Massachusetts Institute of Technology, Cambridge, MA, USA","institution_ids":["https://openalex.org/I63966007"]},{"raw_affiliation_string":"Massachusetts Institute of Technology","institution_ids":["https://openalex.org/I63966007"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071621222","display_name":"Jacob White","orcid":"https://orcid.org/0000-0002-3557-3568","observed_orcids":["https://orcid.org/0000-0002-3557-3568"]},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J.K. White","raw_affiliation_strings":["Department of Electrical Engineering & Computer Science, Massachusetts Institute of Technology, Cambridge, MA, USA","Massachusetts Institute of Technology"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering & Computer Science, Massachusetts Institute of Technology, Cambridge, MA, USA","institution_ids":["https://openalex.org/I63966007"]},{"raw_affiliation_string":"Massachusetts Institute of Technology","institution_ids":["https://openalex.org/I63966007"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I63966007"],"apc_list":{"value":2645,"currency":"USD","value_usd":2645},"apc_paid":null,"fwci":2.7519,"has_fulltext":false,"cited_by_count":50,"citation_normalized_percentile":{"value":0.90594757,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"25","issue":"2","first_page":"274","last_page":"284"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10739","display_name":"Electromagnetic Scattering and Analysis","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/3107","display_name":"Atomic and Molecular Physics, and Optics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10739","display_name":"Electromagnetic Scattering and Analysis","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/3107","display_name":"Atomic and Molecular Physics, and Optics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11263","display_name":"Electromagnetic Simulation and Numerical Methods","score":0.0010000000474974513,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11245","display_name":"Advanced Numerical Analysis Techniques","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/2206","display_name":"Computational Mechanics"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/boundary-element-method","display_name":"boundary element method","score":0.8259999752044678},{"id":"https://openalex.org/keywords/multiscale-methods","display_name":"multiscale methods","score":0.7390000224113464},{"id":"https://openalex.org/keywords/biomems","display_name":"BioMEMS","score":0.9509999752044678},{"id":"https://openalex.org/keywords/octree-decomposition","display_name":"octree decomposition","score":0.8019999861717224},{"id":"https://openalex.org/keywords/low-rank-approximation","display_name":"low-rank approximation","score":0.9909999966621399},{"id":"https://openalex.org/keywords/long-range-interactions","display_name":"long-range interactions","score":0.6660000085830688},{"id":"https://openalex.org/keywords/multipole-method","display_name":"multipole method","score":0.5419999957084656}],"concepts":[{"id":"https://openalex.org/C75172450","wikidata":"https://www.wikidata.org/wiki/Q623950","display_name":"Fast Fourier transform","level":2,"score":0.7744829654693604},{"id":"https://openalex.org/C135115559","wikidata":"https://www.wikidata.org/wiki/Q5437040","display_name":"Fast multipole method","level":3,"score":0.7035912275314331},{"id":"https://openalex.org/C63632240","wikidata":"https://www.wikidata.org/wiki/Q1935004","display_name":"Boundary element method","level":3,"score":0.6925038695335388},{"id":"https://openalex.org/C141297171","wikidata":"https://www.wikidata.org/wiki/Q1143237","display_name":"Octree","level":2,"score":0.6214343309402466},{"id":"https://openalex.org/C2778770139","wikidata":"https://www.wikidata.org/wiki/Q1966904","display_name":"Solver","level":2,"score":0.592517614364624},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5790514945983887},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.5446590185165405},{"id":"https://openalex.org/C52765159","wikidata":"https://www.wikidata.org/wiki/Q1027847","display_name":"Multipole expansion","level":2,"score":0.5402299165725708},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5312578082084656},{"id":"https://openalex.org/C140779682","wikidata":"https://www.wikidata.org/wiki/Q210868","display_name":"Sampling (signal processing)","level":3,"score":0.4828227460384369},{"id":"https://openalex.org/C204323151","wikidata":"https://www.wikidata.org/wiki/Q905424","display_name":"Range (aeronautics)","level":2,"score":0.4655507206916809},{"id":"https://openalex.org/C135628077","wikidata":"https://www.wikidata.org/wiki/Q220184","display_name":"Finite element method","level":2,"score":0.46527478098869324},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4444178342819214},{"id":"https://openalex.org/C62354387","wikidata":"https://www.wikidata.org/wiki/Q875399","display_name":"Boundary (topology)","level":2,"score":0.4431875944137573},{"id":"https://openalex.org/C37977207","wikidata":"https://www.wikidata.org/wiki/Q175561","display_name":"Microelectromechanical systems","level":2,"score":0.4308130145072937},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.22896400094032288},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.16548985242843628},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.11458021402359009},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10841643810272217},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.09212574362754822},{"id":"https://openalex.org/C146978453","wikidata":"https://www.wikidata.org/wiki/Q3798668","display_name":"Aerospace engineering","level":1,"score":0.08509969711303711},{"id":"https://openalex.org/C171250308","wikidata":"https://www.wikidata.org/wiki/Q11468","display_name":"Nanotechnology","level":1,"score":0.07561549544334412},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C106131492","wikidata":"https://www.wikidata.org/wiki/Q3072260","display_name":"Filter (signal processing)","level":2,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/tcad.2005.855946","doi":"https://doi.org/10.1109/tcad.2005.855946","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcad.2005.855946","pdf_url":null,"source":{"id":"https://openalex.org/S100835903","display_name":"IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems","issn_l":"0278-0070","issn":["0278-0070","1937-4151"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["ccf-a","cwts-core","dongbi-a","jufo-2","norway-1","poland-100","russia-white-list-1"],"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems","raw_type":"journal-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.737.9320","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.737.9320","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.rle.mit.edu/cpg/documents/015973601.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":53,"referenced_works":["https://openalex.org/W1487884453","https://openalex.org/W1490084374","https://openalex.org/W1569304948","https://openalex.org/W1968252691","https://openalex.org/W1997639796","https://openalex.org/W2006542668","https://openalex.org/W2007011605","https://openalex.org/W2007841765","https://openalex.org/W2008384380","https://openalex.org/W2012371030","https://openalex.org/W2014100786","https://openalex.org/W2018419001","https://openalex.org/W2018698809","https://openalex.org/W2021534482","https://openalex.org/W2022462423","https://openalex.org/W2030376140","https://openalex.org/W2032518125","https://openalex.org/W2037051732","https://openalex.org/W2040187556","https://openalex.org/W2053386981","https://openalex.org/W2054557822","https://openalex.org/W2056070858","https://openalex.org/W2073663628","https://openalex.org/W2074455935","https://openalex.org/W2074933374","https://openalex.org/W2079279323","https://openalex.org/W2083206954","https://openalex.org/W2093686670","https://openalex.org/W2096070062","https://openalex.org/W2096570668","https://openalex.org/W2099462336","https://openalex.org/W2104196362","https://openalex.org/W2106594199","https://openalex.org/W2117926105","https://openalex.org/W2121375957","https://openalex.org/W2125323855","https://openalex.org/W2125376475","https://openalex.org/W2131196137","https://openalex.org/W2140153041","https://openalex.org/W2143849771","https://openalex.org/W2149537211","https://openalex.org/W2153825083","https://openalex.org/W2155685706","https://openalex.org/W2157089032","https://openalex.org/W2158699284","https://openalex.org/W2161288709","https://openalex.org/W2171879949","https://openalex.org/W2177731497","https://openalex.org/W2519512094","https://openalex.org/W2589980487","https://openalex.org/W3149603432","https://openalex.org/W4246444165","https://openalex.org/W4248087133"],"related_works":["https://openalex.org/W2169924136","https://openalex.org/W2155685706","https://openalex.org/W2371545024","https://openalex.org/W2204046939","https://openalex.org/W2156457231","https://openalex.org/W4399568385","https://openalex.org/W1979119687","https://openalex.org/W2273662142","https://openalex.org/W6988992975","https://openalex.org/W2784269858"],"abstract_inverted_index":{"This":[0],"paper":[1],"presents":[2],"a":[3,41],"fast":[4],"boundary-element":[5],"method":[6],"(BEM)":[7],"algorithm":[8,43,82],"that":[9,17,44,79],"is":[10,29,40],"well":[11],"suited":[12],"for":[13,31,36],"solving":[14],"electrostatics":[15],"problems":[16],"arise":[18],"in":[19,93],"traditional":[20],"and":[21,34,52,63],"bio-microelectromechanical":[22],"systems":[23],"(bio-MEMS)":[24],"design.":[25],"The":[26],"algorithm,":[27],"FFTSVD,":[28],"Green's-function-independent":[30],"low-frequency":[32],"kernels":[33],"efficient":[35],"inhomogeneous":[37],"problems.":[38],"FFTSVD":[39,81],"multiscale":[42],"decomposes":[45],"the":[46,74,80,90],"problem":[47],"domain":[48],"using":[49,73],"an":[50],"octree":[51],"uses":[53],"sampling":[54],"to":[55,59],"calculate":[56],"low-rank":[57],"approximations":[58],"dominant":[60],"source":[61],"distributions":[62],"responses.":[64],"Long-range":[65],"interactions":[66],"at":[67],"each":[68],"length":[69],"scale":[70],"are":[71],"computed":[72],"FFT.":[75],"Computational":[76],"results":[77],"illustrate":[78],"performs":[83],"better":[84],"than":[85],"precorrected-FFT":[86],"(pFFT)-style":[87],"algorithms":[88,92],"or":[89],"multipole-style":[91],"FastCap.":[94]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":7},{"year":2012,"cited_by_count":6}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
