{"id":"https://openalex.org/W2090924944","doi":"https://doi.org/10.1071/mf07120","title":"Phylogenetic analysis of mtDNA sequences suggests revision of humpback dolphin (Sousa spp.) taxonomy is needed","display_name":"Phylogenetic analysis of mtDNA sequences suggests revision of humpback dolphin (Sousa spp.) taxonomy is needed","publication_year":2008,"publication_date":"2008-04-30","ids":{"openalex":"https://openalex.org/W2090924944","doi":"https://doi.org/10.1071/mf07120","mag":"2090924944"},"language":"en","primary_location":{"id":"doi:10.1071/mf07120","doi":"https://doi.org/10.1071/mf07120","is_oa":false,"landing_page_url":"https://doi.org/10.1071/mf07120","pdf_url":null,"source":{"id":"https://openalex.org/S41031980","display_name":"Marine and Freshwater Research","issn_l":"1323-1650","issn":["1323-1650","1448-6059"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","jufo-1","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320302","host_organization_name":"CSIRO Publishing","host_organization_lineage":["https://openalex.org/P4310320302"],"host_organization_lineage_names":["CSIRO Publishing"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Marine and Freshwater Research","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079121743","display_name":"C\u00e9line Fr\u00e8re","orcid":"https://orcid.org/0000-0002-9671-2138","observed_orcids":["https://orcid.org/0000-0002-9671-2138"]},"institutions":[{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"C\u00e9line H. Fr\u00e8re","raw_affiliation_strings":["ASchool of Biological, Earth and Ecological Sciences, University of New South Wales, Sydney, NSW 2052, Australia","ECorresponding author. Email: c.frere@uq.edu.au","School of Biological Earth and Ecological Sciences, University of New South Wales, Sydney, NSW 2052, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ASchool of Biological, Earth and Ecological Sciences, University of New South Wales, Sydney, NSW 2052, Australia","institution_ids":["https://openalex.org/I31746571"]},{"raw_affiliation_string":"ECorresponding author. Email: c.frere@uq.edu.au","institution_ids":[]},{"raw_affiliation_string":"School of Biological Earth and Ecological Sciences, University of New South Wales, Sydney, NSW 2052, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110092000","display_name":"Peter Thomas Hale","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Peter T. Hale","raw_affiliation_strings":["BSchool of Integrative Biology, University of Queensland, Brisbane, Qld 4072, Australia","School of integrative Biology, University of Queensland, Brisbane QLD 4072, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BSchool of Integrative Biology, University of Queensland, Brisbane, Qld 4072, Australia","institution_ids":["https://openalex.org/I165143802"]},{"raw_affiliation_string":"School of integrative Biology, University of Queensland, Brisbane QLD 4072, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108627666","display_name":"Lindsay Porter","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lindsay Porter","raw_affiliation_strings":["CWorldwide Fund for Nature, 1 Tramway Path, Central, Hong Kong","Worldwide Fund for Nature, 1 Tramway Path, Central, Hong Kong"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CWorldwide Fund for Nature, 1 Tramway Path, Central, Hong Kong","institution_ids":[]},{"raw_affiliation_string":"Worldwide Fund for Nature, 1 Tramway Path, Central, Hong Kong","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076707272","display_name":"Victor G. Cockcroft","orcid":"https://orcid.org/0000-0001-8630-4168","observed_orcids":["https://orcid.org/0000-0001-8630-4168"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Victor G. Cockcroft","raw_affiliation_strings":["DCentre for Dolphin Studies, PO Box 1856, Plettenberg Bay, South Africa 6600","Centre for Dolphin Studies, PO Box 1856, Plettenberg Bay, South Africa 6600"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DCentre for Dolphin Studies, PO Box 1856, Plettenberg Bay, South Africa 6600","institution_ids":[]},{"raw_affiliation_string":"Centre for Dolphin Studies, PO Box 1856, Plettenberg Bay, South Africa 6600","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026654879","display_name":"Merel L. Dalebout","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Merel L. Dalebout","raw_affiliation_strings":["ASchool of Biological, Earth and Ecological Sciences, University of New South Wales, Sydney, NSW 2052, Australia","School of Biological Earth and Ecological Sciences, University of New South Wales, Sydney, NSW 2052, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ASchool of Biological, Earth and Ecological Sciences, University of New South Wales, Sydney, NSW 2052, Australia","institution_ids":["https://openalex.org/I31746571"]},{"raw_affiliation_string":"School of Biological Earth and Ecological Sciences, University of New South Wales, Sydney, NSW 2052, Australia","institution_ids":["https://openalex.org/I31746571"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":4.1969,"has_fulltext":false,"cited_by_count":46,"citation_normalized_percentile":{"value":0.94210605,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"59","issue":"3","first_page":"259","last_page":"268"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10659","display_name":"Marine animal studies overview","score":0.836899995803833,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10659","display_name":"Marine animal studies overview","score":0.836899995803833,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.15520000457763672,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11354","display_name":"Evolution and Paleontology Studies","score":0.0010000000474974513,"subfield":{"id":"https://openalex.org/subfields/1911","display_name":"Paleontology"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/humpback-dolphin","display_name":"humpback dolphin","score":0.9169999957084656},{"id":"https://openalex.org/keywords/sousa","display_name":"Sousa","score":0.9359999895095825},{"id":"https://openalex.org/keywords/sousa-chinensis","display_name":"Sousa chinensis","score":0.875},{"id":"https://openalex.org/keywords/sousa-plumbea","display_name":"Sousa plumbea","score":0.8989999890327454},{"id":"https://openalex.org/keywords/sousa-teuszii","display_name":"Sousa teuszii","score":0.9959999918937683},{"id":"https://openalex.org/keywords/mitochondrial-control-region","display_name":"mitochondrial DNA control region","score":0.7630000114440918},{"id":"https://openalex.org/keywords/phylogenetic-relationships","display_name":"phylogenetic relationships","score":0.8460000157356262},{"id":"https://openalex.org/keywords/taxonomic-revision","display_name":"taxonomic revision","score":0.7369999885559082},{"id":"https://openalex.org/keywords/species-delimitation","display_name":"species delimitation","score":0.7570000290870667},{"id":"https://openalex.org/keywords/genetic-divergence","display_name":"genetic divergence","score":0.8880000114440918}],"concepts":[{"id":"https://openalex.org/C12326286","wikidata":"https://www.wikidata.org/wiki/Q210958","display_name":"Monophyly","level":5,"score":0.751551628112793},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7154257297515869},{"id":"https://openalex.org/C94043034","wikidata":"https://www.wikidata.org/wiki/Q377756","display_name":"Phylogeography","level":4,"score":0.6493113040924072},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.6091729402542114},{"id":"https://openalex.org/C58642233","wikidata":"https://www.wikidata.org/wiki/Q8269924","display_name":"Taxonomy (biology)","level":2,"score":0.5934258699417114},{"id":"https://openalex.org/C44465124","wikidata":"https://www.wikidata.org/wiki/Q713623","display_name":"Clade","level":4,"score":0.5557686686515808},{"id":"https://openalex.org/C2779227729","wikidata":"https://www.wikidata.org/wiki/Q1547309","display_name":"Indo-Pacific","level":2,"score":0.47093191742897034},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.43642595410346985},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.3385149836540222},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1071/mf07120","doi":"https://doi.org/10.1071/mf07120","is_oa":false,"landing_page_url":"https://doi.org/10.1071/mf07120","pdf_url":null,"source":{"id":"https://openalex.org/S41031980","display_name":"Marine and Freshwater Research","issn_l":"1323-1650","issn":["1323-1650","1448-6059"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","jufo-1","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320302","host_organization_name":"CSIRO Publishing","host_organization_lineage":["https://openalex.org/P4310320302"],"host_organization_lineage_names":["CSIRO Publishing"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Marine and Freshwater Research","raw_type":"journal-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.655.8071","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.655.8071","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.publish.csiro.au/?act%3Dview_file%26file_id%3DMF07120.pdf","raw_type":"text"},{"id":"pmh:oai:dspacecris-nc1.mandela.ac.za:10948/2046396","doi":null,"is_oa":false,"landing_page_url":"https://hdl.handle.net/10948/2046396","pdf_url":null,"source":{"id":"https://openalex.org/S7407089438","display_name":"Nelson Mandela University Research Repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":40,"referenced_works":["https://openalex.org/W21632568","https://openalex.org/W22422603","https://openalex.org/W93588716","https://openalex.org/W302508501","https://openalex.org/W583646462","https://openalex.org/W641398428","https://openalex.org/W1576054686","https://openalex.org/W1900380445","https://openalex.org/W1963904211","https://openalex.org/W1982447955","https://openalex.org/W1986267709","https://openalex.org/W2034557249","https://openalex.org/W2054052545","https://openalex.org/W2058377178","https://openalex.org/W2058815839","https://openalex.org/W2071710495","https://openalex.org/W2082928585","https://openalex.org/W2083093375","https://openalex.org/W2085287299","https://openalex.org/W2101846955","https://openalex.org/W2120512021","https://openalex.org/W2146396346","https://openalex.org/W2149984857","https://openalex.org/W2150783480","https://openalex.org/W2150922157","https://openalex.org/W2151723210","https://openalex.org/W2153825416","https://openalex.org/W2161444534","https://openalex.org/W2168422692","https://openalex.org/W2217880123","https://openalex.org/W2289870544","https://openalex.org/W2577783241","https://openalex.org/W2612462766","https://openalex.org/W2623985494","https://openalex.org/W2764687937","https://openalex.org/W2794275556","https://openalex.org/W3185630090","https://openalex.org/W4210985389","https://openalex.org/W4236640734","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W7095905115","https://openalex.org/W2029296425","https://openalex.org/W1967251255","https://openalex.org/W2096840769","https://openalex.org/W2168422692","https://openalex.org/W2056309992","https://openalex.org/W21632568","https://openalex.org/W3127518225","https://openalex.org/W2996297132","https://openalex.org/W2080890682"],"abstract_inverted_index":{"Humpback":[0],"dolphins":[1,128,187],"(Sousa":[2],"spp.)":[3],"have":[4],"a":[5,16,135,195],"wide":[6],"distribution":[7],"in":[8,73,99,198],"the":[9,74,100,139,148],"tropical":[10],"Atlantic":[11,101,140],"and":[12,15,34,51,89,96,120,132,160,172],"Indo-Pacific":[13,75,110],"Oceans":[14],"confused":[17],"taxonomy.":[18],"Morphological":[19],"assessments":[20],"suggest":[21,183],"three":[22,71,109],"species":[23,46,197],"groupings":[24],"\u2013":[25,39,47],"Sousa":[26,30,35,69],"teuszii":[27,53,98,142],"(eastern":[28,37],"Atlantic),":[29],"plumbea":[31],"(western":[32],"Indo-Pacific),":[33],"chinensis":[36,49,191],"Indo-Pacific)":[38],"but":[40,192],"most":[41],"taxonomies":[42],"recognise":[43],"only":[44],"two":[45],"S.":[48,52,78,84,91,97,141,190],"(Indo-Pacific),":[50],"(Atlantic).":[54],"To":[55],"investigate":[56],"phylogenetic":[57],"relationships,":[58],"mitochondrial":[59],"DNA":[60],"control":[61],"region":[62],"sequences":[63],"(338":[64],"base":[65],"pairs)":[66],"from":[67,129,152,158],"72":[68],"representing":[70],"populations":[72,111],"(South":[76],"Africa:":[77],"plumbea,":[79],"n":[80,86,93,103],"=":[81,87,94,104,163,176],"23;":[82],"China:":[83],"chinensis,":[85,92],"19;":[88],"Australia:":[90],"28),":[95],"(Mauritania,":[102],"2)":[105],"were":[106],"generated.":[107],"All":[108],"formed":[112,134],"robust,":[113],"monophyletic":[114],"clades":[115],"with":[116,138],"high":[117],"bootstrap":[118],"(BS)":[119],"Bayesian":[121],"posterior":[122],"probability":[123],"(BPP)":[124],"scores.":[125],"Surprisingly,":[126],"humpback":[127,186],"South":[130,173],"Africa":[131,174],"China":[133,159,171],"strongly-supported":[136],"clade":[137],"(BS":[143],"63%,":[144],"BPP":[145],"0.92)":[146],"to":[147],"exclusion":[149],"of":[150],"animals":[151,157],"Australia.":[153],"Genetic":[154],"divergence":[155],"between":[156,170],"Australia":[161],"(DA":[162,175],"8.4%":[164],"\u00b1":[165,178],"2.47%)":[166],"was":[167],"greater":[168],"than":[169],"5.1%":[177],"1.80%).":[179],"These":[180],"results":[181],"strongly":[182],"that":[184],"Australian":[185],"are":[188],"not":[189],"may":[193],"represent":[194],"distinct":[196],"their":[199],"own":[200],"right.":[201]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2017,"cited_by_count":5},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":4}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
