{"id":"https://openalex.org/W2084765796","doi":"https://doi.org/10.1021/ac049294n","title":"Structural Characterization of N-Glycopeptides by Matrix-Dependent Selective Fragmentation of MALDI-TOF/TOF Tandem Mass Spectrometry","display_name":"Structural Characterization of N-Glycopeptides by Matrix-Dependent Selective Fragmentation of MALDI-TOF/TOF Tandem Mass Spectrometry","publication_year":2004,"publication_date":"2004-09-15","ids":{"openalex":"https://openalex.org/W2084765796","doi":"https://doi.org/10.1021/ac049294n","mag":"2084765796","pmid":"https://pubmed.ncbi.nlm.nih.gov/15481958"},"language":"en","primary_location":{"id":"doi:10.1021/ac049294n","doi":"https://doi.org/10.1021/ac049294n","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ac049294n","pdf_url":null,"source":{"id":"https://openalex.org/S191963794","display_name":"Analytical Chemistry","issn_l":"0003-2700","issn":["0003-2700","1520-6882"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","dongbi-a","doyens","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Analytical Chemistry","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031525892","display_name":"Masaki Kurogochi","orcid":"https://orcid.org/0000-0003-3549-5309","observed_orcids":["https://orcid.org/0000-0003-3549-5309"]},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masaki Kurogochi","raw_affiliation_strings":["Division of Biological Sciences, Graduate School of Science, Frontier Research Center for the Post-Genomic Science and Technology, Hokkaido University, N21, W11, Sapporo 001-0021, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biological Sciences, Graduate School of Science, Frontier Research Center for the Post-Genomic Science and Technology, Hokkaido University, N21, W11, Sapporo 001-0021, Japan","institution_ids":["https://openalex.org/I205349734"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074428939","display_name":"Shin\u2010Ichiro Nishimura","orcid":"https://orcid.org/0000-0002-6608-8418","observed_orcids":["https://orcid.org/0000-0002-6608-8418"]},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shin-Ichiro Nishimura","raw_affiliation_strings":["Division of Biological Sciences, Graduate School of Science, Frontier Research Center for the Post-Genomic Science and Technology, Hokkaido University, N21, W11, Sapporo 001-0021, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biological Sciences, Graduate School of Science, Frontier Research Center for the Post-Genomic Science and Technology, Hokkaido University, N21, W11, Sapporo 001-0021, Japan","institution_ids":["https://openalex.org/I205349734"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I205349734"],"apc_list":{"value":4500,"currency":"USD","value_usd":4500},"apc_paid":null,"fwci":3.8063,"has_fulltext":false,"cited_by_count":75,"citation_normalized_percentile":{"value":0.94991548,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":87,"max":97},"biblio":{"volume":"76","issue":"20","first_page":"6097","last_page":"6101"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.513700008392334,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.513700008392334,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.4814000129699707,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.0013000000035390258,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/n-glycopeptides","display_name":"N-glycopeptides","score":0.984000027179718},{"id":"https://openalex.org/keywords/oligosaccharide-fragmentation","display_name":"oligosaccharide fragmentation","score":0.8679999709129333},{"id":"https://openalex.org/keywords/post-source-decay","display_name":"post-source decay","score":0.7350000143051147},{"id":"https://openalex.org/keywords/n-acetylneuraminic-acid","display_name":"N-acetylneuraminic acid","score":0.7570000290870667},{"id":"https://openalex.org/keywords/fucose","display_name":"fucose","score":0.8109999895095825}],"concepts":[{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.9425545930862427},{"id":"https://openalex.org/C191015642","wikidata":"https://www.wikidata.org/wiki/Q1132459","display_name":"Fragmentation (computing)","level":2,"score":0.7566421031951904},{"id":"https://openalex.org/C162356407","wikidata":"https://www.wikidata.org/wiki/Q180809","display_name":"Mass spectrometry","level":2,"score":0.6610584259033203},{"id":"https://openalex.org/C137610392","wikidata":"https://www.wikidata.org/wiki/Q2425020","display_name":"Glycopeptide","level":3,"score":0.6547302007675171},{"id":"https://openalex.org/C75280812","wikidata":"https://www.wikidata.org/wiki/Q190382","display_name":"Matrix-assisted laser desorption/ionization","level":4,"score":0.6427277326583862},{"id":"https://openalex.org/C31827203","wikidata":"https://www.wikidata.org/wiki/Q874296","display_name":"Tandem mass spectrometry","level":3,"score":0.6267677545547485},{"id":"https://openalex.org/C2777726330","wikidata":"https://www.wikidata.org/wiki/Q320607","display_name":"Oligosaccharide","level":2,"score":0.49495095014572144},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.4836226999759674},{"id":"https://openalex.org/C198291218","wikidata":"https://www.wikidata.org/wiki/Q190382","display_name":"Ionization","level":3,"score":0.47075727581977844},{"id":"https://openalex.org/C145148216","wikidata":"https://www.wikidata.org/wiki/Q36496","display_name":"Ion","level":2,"score":0.4248094856739044},{"id":"https://openalex.org/C113196181","wikidata":"https://www.wikidata.org/wiki/Q485223","display_name":"Analytical Chemistry (journal)","level":2,"score":0.3498194217681885},{"id":"https://openalex.org/C21951064","wikidata":"https://www.wikidata.org/wiki/Q899212","display_name":"Combinatorial chemistry","level":1,"score":0.3355224132537842},{"id":"https://openalex.org/C162711632","wikidata":"https://www.wikidata.org/wiki/Q905514","display_name":"Desorption","level":3,"score":0.30774959921836853},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.13905179500579834},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.07617035508155823},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.0},{"id":"https://openalex.org/C501593827","wikidata":"https://www.wikidata.org/wiki/Q12187","display_name":"Antibiotics","level":2,"score":0.0},{"id":"https://openalex.org/C150394285","wikidata":"https://www.wikidata.org/wiki/Q180254","display_name":"Adsorption","level":2,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D002240","descriptor_name":"Carbohydrate Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006020","descriptor_name":"Glycopeptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019032","descriptor_name":"Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1021/ac049294n","doi":"https://doi.org/10.1021/ac049294n","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ac049294n","pdf_url":null,"source":{"id":"https://openalex.org/S191963794","display_name":"Analytical Chemistry","issn_l":"0003-2700","issn":["0003-2700","1520-6882"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","dongbi-a","doyens","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Analytical Chemistry","raw_type":"journal-article"},{"id":"pmid:15481958","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15481958","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Analytical chemistry","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1964850706","https://openalex.org/W1974830441","https://openalex.org/W1976165460","https://openalex.org/W1986693684","https://openalex.org/W1995662039","https://openalex.org/W2028062152","https://openalex.org/W2037549368","https://openalex.org/W2054073173","https://openalex.org/W2069097031","https://openalex.org/W2074947572","https://openalex.org/W2080670067","https://openalex.org/W2092105992","https://openalex.org/W2095108396","https://openalex.org/W2101316794","https://openalex.org/W2108716410","https://openalex.org/W2110174460","https://openalex.org/W2161574105","https://openalex.org/W2952450708","https://openalex.org/W2953019130"],"related_works":["https://openalex.org/W1976197185","https://openalex.org/W2008276924","https://openalex.org/W2023946232","https://openalex.org/W2057707130","https://openalex.org/W2330910330","https://openalex.org/W2131160906","https://openalex.org/W2045545813","https://openalex.org/W2123175488","https://openalex.org/W2030864700","https://openalex.org/W2082855485"],"abstract_inverted_index":{"The":[0],"matrix-assisted":[1],"laser":[2],"desorption/ionization":[3],"time-of-flight":[4],"(MALDI-TOF)":[5],"MS":[6,30,90,152],"technique":[7,66,87],"described":[8],"to":[9,13,88,96,102],"date":[10],"has":[11],"proven":[12],"be":[14,111],"a":[15],"convenient":[16],"and":[17,22,35,43,56,74,79,163,166],"rapid":[18],"method":[19,58],"for":[20],"identification":[21],"characterizations":[23],"of":[24,32,41,47,67,77,84,128,156],"proteins.":[25],"However,":[26],"the":[27,44,61,85,97,125,129],"general":[28],"MALDI-TOF":[29],"analysis":[31,91],"complex":[33,157],"carbohydrates":[34],"glycopeptides":[36],"still":[37],"entails":[38],"special":[39],"consideration":[40],"ionization":[42],"fragmentation":[45,64,76],"characteristics":[46],"labile":[48],"carbohydrate":[49],"moieties.":[50],"In":[51],"this":[52,141],"study,":[53],"an":[54],"efficient":[55],"practical":[57],"we":[59],"termed":[60],"matrix-dependent":[62],"selective":[63],"(MDSF)":[65],"MALDI-TOF/TOF":[68],"MS,":[69],"which":[70],"allows":[71],"highly":[72],"sensitive":[73,106],"reliable":[75],"oligosaccharides":[78],"N-glycopeptides.":[80,167],"Results":[81],"from":[82],"application":[83],"MDSF":[86,118,149],"TOF/TOF":[89,151],"demonstrated":[92],"that":[93,117],"in":[94,150],"comparison":[95],"conventional":[98],"postsource":[99],"decay":[100],"up":[101],"170":[103],"times":[104],"more":[105],"product":[107,144],"ion":[108,133,145],"peaks":[109,146],"could":[110],"obtained.":[112],"It":[113],"was":[114],"also":[115],"suggested":[116],"generates":[119],"desired":[120],"structural":[121,154],"information":[122],"based":[123],"on":[124],"controlled":[126],"cleavage":[127],"singly":[130],"charged":[131],"precursor":[132],"with":[134],"different":[135],"electronic":[136],"excited":[137],"states":[138],"made":[139],"by":[140,148],"method.":[142],"Ideal":[143],"observed":[147],"facilitated":[153],"characterization":[155],"oligosaccharide":[158],"derivatives":[159],"including":[160],"unstable":[161],"Neu5Ac":[162],"Fuc":[164],"residues":[165]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2016-06-24T00:00:00"}
