{"id":"https://openalex.org/W2071960494","doi":"https://doi.org/10.1007/s00335-010-9296-0","title":"Human and chicken TLR pathways: manual curation and computer-based orthology analysis","display_name":"Human and chicken TLR pathways: manual curation and computer-based orthology analysis","publication_year":2010,"publication_date":"2010-10-30","ids":{"openalex":"https://openalex.org/W2071960494","doi":"https://doi.org/10.1007/s00335-010-9296-0","mag":"2071960494","pmid":"https://pubmed.ncbi.nlm.nih.gov/21052677","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/3035812"},"language":"en","primary_location":{"id":"doi:10.1007/s00335-010-9296-0","doi":"https://doi.org/10.1007/s00335-010-9296-0","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00335-010-9296-0","pdf_url":null,"source":{"id":"https://openalex.org/S197264859","display_name":"Mammalian Genome","issn_l":"0938-8990","issn":["0938-8990","1432-1777"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-2"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Mammalian Genome","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3035812","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5040546699","display_name":"Marc E. Gillespie","orcid":"https://orcid.org/0000-0002-5766-1702","observed_orcids":["https://orcid.org/0000-0002-5766-1702"]},"institutions":[{"id":"https://openalex.org/I142823887","display_name":"St. John's University","ror":"https://ror.org/00bgtad15","country_code":"US","type":"education","lineage":["https://openalex.org/I142823887"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marc Gillespie","raw_affiliation_strings":["College of Pharmacy and Allied Health Professions, St. John's University, 8000 Utopia Parkway, Queens, NY 11439, USA","College of Pharmacy & Allied Health Professions,, St. John\u2019s University, Queens, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmacy and Allied Health Professions, St. John's University, 8000 Utopia Parkway, Queens, NY 11439, USA","institution_ids":["https://openalex.org/I142823887"]},{"raw_affiliation_string":"College of Pharmacy & Allied Health Professions,, St. John\u2019s University, Queens, USA","institution_ids":["https://openalex.org/I142823887"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056708717","display_name":"Veronica Shamovsky","orcid":"https://orcid.org/0000-0002-2187-2241","observed_orcids":["https://orcid.org/0000-0002-2187-2241"]},"institutions":[{"id":"https://openalex.org/I4210086933","display_name":"NYU Langone Health","ror":"https://ror.org/005dvqh91","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210086933"]},{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Veronica Shamovsky","raw_affiliation_strings":["NYU School of Medicine \u2013 Biochemistry, 550 First Avenue MSB 390, New York, NY, 10016, USA","NYU School of Medicine \u2013 Biochemistry, New York, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"NYU School of Medicine \u2013 Biochemistry, 550 First Avenue MSB 390, New York, NY, 10016, USA","institution_ids":["https://openalex.org/I4210086933","https://openalex.org/I57206974"]},{"raw_affiliation_string":"NYU School of Medicine \u2013 Biochemistry, New York, USA","institution_ids":["https://openalex.org/I57206974"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074201106","display_name":"Peter D\u2019Eustachio","orcid":"https://orcid.org/0000-0002-5494-626X","observed_orcids":["https://orcid.org/0000-0002-5494-626X"]},"institutions":[{"id":"https://openalex.org/I4210086933","display_name":"NYU Langone Health","ror":"https://ror.org/005dvqh91","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210086933"]},{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Peter D\u2019Eustachio","raw_affiliation_strings":["NYU School of Medicine \u2013 Biochemistry, 550 First Avenue MSB 390, New York, NY, 10016, USA","NYU School of Medicine \u2013 Biochemistry, New York, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"NYU School of Medicine \u2013 Biochemistry, 550 First Avenue MSB 390, New York, NY, 10016, USA","institution_ids":["https://openalex.org/I4210086933","https://openalex.org/I57206974"]},{"raw_affiliation_string":"NYU School of Medicine \u2013 Biochemistry, New York, USA","institution_ids":["https://openalex.org/I57206974"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5074201106"],"corresponding_institution_ids":["https://openalex.org/I4210086933","https://openalex.org/I57206974"],"apc_list":{"value":3890,"currency":"USD","value_usd":3890},"apc_paid":null,"fwci":1.0255,"has_fulltext":false,"cited_by_count":20,"citation_normalized_percentile":{"value":0.74334567,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":97},"biblio":{"volume":"22","issue":"1-2","first_page":"130","last_page":"138"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10371","display_name":"Immune Response and Inflammation","score":0.9375,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10371","display_name":"Immune Response and Inflammation","score":0.9375,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.037300001829862595,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.008100000210106373,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/toll-like-receptors","display_name":"Toll-like receptors","score":0.996999979019165},{"id":"https://openalex.org/keywords/chicken-innate-immunity","display_name":"chicken innate immunity","score":0.7429999709129333},{"id":"https://openalex.org/keywords/tlr3","display_name":"TLR3","score":0.890999972820282},{"id":"https://openalex.org/keywords/pathway-annotation","display_name":"pathway annotation","score":0.6039999723434448},{"id":"https://openalex.org/keywords/manual-curation","display_name":"manual curation","score":0.6809999942779541},{"id":"https://openalex.org/keywords/antiviral-signaling","display_name":"antiviral signaling","score":0.7329999804496765},{"id":"https://openalex.org/keywords/double-stranded-rna-sensing","display_name":"double-stranded RNA sensing","score":0.5249999761581421}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8572484254837036},{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.6396688222885132},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5938565731048584},{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.5879925489425659},{"id":"https://openalex.org/C2778473898","wikidata":"https://www.wikidata.org/wiki/Q2145110","display_name":"Repertoire","level":2,"score":0.5255721211433411},{"id":"https://openalex.org/C136449434","wikidata":"https://www.wikidata.org/wiki/Q428253","display_name":"Innate immune system","level":3,"score":0.495552659034729},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4330179691314697},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.39651423692703247},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.31785106658935547},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.2827501893043518},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.2508249580860138},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002645","descriptor_name":"Chickens","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D002645","descriptor_name":"Chickens","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008322","descriptor_name":"Mammals","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008322","descriptor_name":"Mammals","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008322","descriptor_name":"Mammals","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051193","descriptor_name":"Toll-Like Receptors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D051193","descriptor_name":"Toll-Like Receptors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1007/s00335-010-9296-0","doi":"https://doi.org/10.1007/s00335-010-9296-0","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00335-010-9296-0","pdf_url":null,"source":{"id":"https://openalex.org/S197264859","display_name":"Mammalian Genome","issn_l":"0938-8990","issn":["0938-8990","1432-1777"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-2"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Mammalian Genome","raw_type":"journal-article"},{"id":"pmid:21052677","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21052677","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Mammalian genome : official journal of the International Mammalian Genome Society","raw_type":"Comparative Study"},{"id":"pmh:oai:pubmedcentral.nih.gov:3035812","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3035812","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Mamm Genome","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:3035812","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3035812","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Mamm Genome","raw_type":"Text"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G2815737439","display_name":"Reactome: An Open Knowledgebase of Human Pathways","funder_award_id":"U41HG003751","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G8345514468","display_name":"Reactome: An Open Knowledgebase of Human Pathways","funder_award_id":"P41HG003751","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"}],"funders":[{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":44,"referenced_works":["https://openalex.org/W1236321187","https://openalex.org/W1503037824","https://openalex.org/W1967463201","https://openalex.org/W1971378778","https://openalex.org/W1977027195","https://openalex.org/W1981294127","https://openalex.org/W1983470819","https://openalex.org/W1987446819","https://openalex.org/W1988948587","https://openalex.org/W1999895438","https://openalex.org/W2000192473","https://openalex.org/W2002405581","https://openalex.org/W2006871299","https://openalex.org/W2008856488","https://openalex.org/W2008914561","https://openalex.org/W2016292931","https://openalex.org/W2032628655","https://openalex.org/W2033926771","https://openalex.org/W2046791906","https://openalex.org/W2053636710","https://openalex.org/W2058860376","https://openalex.org/W2059693001","https://openalex.org/W2068933786","https://openalex.org/W2082870151","https://openalex.org/W2090640877","https://openalex.org/W2093029664","https://openalex.org/W2103017472","https://openalex.org/W2111260918","https://openalex.org/W2115404629","https://openalex.org/W2125904022","https://openalex.org/W2128601422","https://openalex.org/W2132242065","https://openalex.org/W2132992030","https://openalex.org/W2138651252","https://openalex.org/W2141528656","https://openalex.org/W2153258203","https://openalex.org/W2154712398","https://openalex.org/W2155697606","https://openalex.org/W2161062388","https://openalex.org/W2171437346","https://openalex.org/W4211208250","https://openalex.org/W4233060585","https://openalex.org/W7096257995","https://openalex.org/W7098128289"],"related_works":["https://openalex.org/W2362752681","https://openalex.org/W69042384","https://openalex.org/W2101365113","https://openalex.org/W2105174344","https://openalex.org/W2038417097","https://openalex.org/W2033926771","https://openalex.org/W80724896","https://openalex.org/W2282738889","https://openalex.org/W2006871299","https://openalex.org/W2368889626"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":3}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
