{"id":"https://openalex.org/W2071938754","doi":"https://doi.org/10.1094/mpmi.2004.17.10.1139","title":"Tobacco Genes Induced by the Bacterial Effector Protein AvrPto","display_name":"Tobacco Genes Induced by the Bacterial Effector Protein AvrPto","publication_year":2004,"publication_date":"2004-10-01","ids":{"openalex":"https://openalex.org/W2071938754","doi":"https://doi.org/10.1094/mpmi.2004.17.10.1139","mag":"2071938754","pmid":"https://pubmed.ncbi.nlm.nih.gov/15497406"},"language":"en","primary_location":{"id":"doi:10.1094/mpmi.2004.17.10.1139","doi":"https://doi.org/10.1094/mpmi.2004.17.10.1139","is_oa":false,"landing_page_url":"https://doi.org/10.1094/mpmi.2004.17.10.1139","pdf_url":null,"source":{"id":"https://openalex.org/S88768767","display_name":"Molecular Plant-Microbe Interactions","issn_l":"0894-0282","issn":["0894-0282","1943-7706"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320276","host_organization_name":"American Phytopathological Society","host_organization_lineage":["https://openalex.org/P4310320276"],"host_organization_lineage_names":["American Phytopathological Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Plant-Microbe Interactions\u00ae","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doaj.org/article/2df244c7bd6c4fe9bec3e58e1bc1fb4c","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035517397","display_name":"Venkatappa K. Thara","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I189590672","display_name":"Kansas State University","ror":"https://ror.org/05p1j8758","country_code":"US","type":"education","lineage":["https://openalex.org/I189590672"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Venkatappa K. Thara","raw_affiliation_strings":["Department of Plant Pathology, Kansas State University, Manhattan, KS, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant Pathology, Kansas State University, Manhattan, KS, U.S.A","institution_ids":["https://openalex.org/I189590672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075054607","display_name":"Alexander R. Seilaniantz","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I189590672","display_name":"Kansas State University","ror":"https://ror.org/05p1j8758","country_code":"US","type":"education","lineage":["https://openalex.org/I189590672"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander R. Seilaniantz","raw_affiliation_strings":["","Kansas state university"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]},{"raw_affiliation_string":"Kansas state university","institution_ids":["https://openalex.org/I189590672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042435594","display_name":"Youping Deng","orcid":"https://orcid.org/0000-0002-5951-8213","observed_orcids":["https://orcid.org/0000-0002-5951-8213"]},"institutions":[{"id":"https://openalex.org/I189590672","display_name":"Kansas State University","ror":"https://ror.org/05p1j8758","country_code":"US","type":"education","lineage":["https://openalex.org/I189590672"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Youping Deng","raw_affiliation_strings":["","Kansas state university"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]},{"raw_affiliation_string":"Kansas state university","institution_ids":["https://openalex.org/I189590672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102064811","display_name":"Yinghua Dong","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I189590672","display_name":"Kansas State University","ror":"https://ror.org/05p1j8758","country_code":"US","type":"education","lineage":["https://openalex.org/I189590672"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yinghua Dong","raw_affiliation_strings":["","Kansas state university"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]},{"raw_affiliation_string":"Kansas state university","institution_ids":["https://openalex.org/I189590672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065816001","display_name":"Yinong Yang","orcid":"https://orcid.org/0000-0002-2698-1754","observed_orcids":["https://orcid.org/0000-0002-2698-1754"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yinong Yang","raw_affiliation_strings":["","Plant Pathology and Environmental Microbiology"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]},{"raw_affiliation_string":"Plant Pathology and Environmental Microbiology","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084827613","display_name":"Xiaoyan Tang","orcid":"https://orcid.org/0000-0001-9199-5346","observed_orcids":["https://orcid.org/0000-0001-9199-5346"]},"institutions":[{"id":"https://openalex.org/I189590672","display_name":"Kansas State University","ror":"https://ror.org/05p1j8758","country_code":"US","type":"education","lineage":["https://openalex.org/I189590672"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaoyan Tang","raw_affiliation_strings":["","Kansas state university"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]},{"raw_affiliation_string":"Kansas state university","institution_ids":["https://openalex.org/I189590672"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110139721","display_name":"Jian-Min Zhou","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I189590672","display_name":"Kansas State University","ror":"https://ror.org/05p1j8758","country_code":"US","type":"education","lineage":["https://openalex.org/I189590672"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jian-Min Zhou","raw_affiliation_strings":["Corresponding author: J.-M. Zhou; E-mail: \r\n                    E-mail Address:\r\n                    [email\u00a0protected]; Telephone: 785-532-2415; Fax: 785-532-5692","Kansas state university"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Corresponding author: J.-M. Zhou; E-mail: \r\n                    E-mail Address:\r\n                    [email\u00a0protected]; Telephone: 785-532-2415; Fax: 785-532-5692","institution_ids":[]},{"raw_affiliation_string":"Kansas state university","institution_ids":["https://openalex.org/I189590672"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3000,"currency":"USD","value_usd":3000},"apc_paid":null,"fwci":1.6485,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.8391512,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":94},"biblio":{"volume":"17","issue":"10","first_page":"1139","last_page":"1145"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10076","display_name":"Plant-Microbe Interactions and Immunity","score":0.7505000233650208,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10076","display_name":"Plant-Microbe Interactions and Immunity","score":0.7505000233650208,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.24580000340938568,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12858","display_name":"Plant Disease Resistance and Genetics","score":0.0008999999845400453,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/avrpto","display_name":"AvrPto","score":0.9950000047683716},{"id":"https://openalex.org/keywords/type-iii-effector-proteins","display_name":"type III effector proteins","score":0.843999981880188},{"id":"https://openalex.org/keywords/avirulence","display_name":"avirulence","score":0.6710000038146973},{"id":"https://openalex.org/keywords/nicotiana-tabacum","display_name":"tobacco","score":0.4819999933242798},{"id":"https://openalex.org/keywords/gene-induction","display_name":"gene induction","score":0.4259999990463257},{"id":"https://openalex.org/keywords/plant-defense-response","display_name":"plant defense response","score":0.48399999737739563},{"id":"https://openalex.org/keywords/hypersensitive-response","display_name":"hypersensitive response","score":0.656000018119812},{"id":"https://openalex.org/keywords/disease-resistance","display_name":"disease resistance","score":0.5619999766349792},{"id":"https://openalex.org/keywords/transgenic-tobacco","display_name":"transgenic tobacco","score":0.41200000047683716}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7255527377128601},{"id":"https://openalex.org/C51785407","wikidata":"https://www.wikidata.org/wiki/Q2627568","display_name":"Effector","level":2,"score":0.6743184328079224},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5267077088356018},{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.5127745270729065},{"id":"https://openalex.org/C200148052","wikidata":"https://www.wikidata.org/wiki/Q5958568","display_name":"Hypersensitive response","level":4,"score":0.43045246601104736},{"id":"https://openalex.org/C93678976","wikidata":"https://www.wikidata.org/wiki/Q4215946","display_name":"Plant disease resistance","level":3,"score":0.4009891748428345},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.3248994052410126},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.24469774961471558}],"mesh":[{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":true},{"descriptor_ui":"D005798","descriptor_name":"Genes, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010935","descriptor_name":"Plant Diseases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010935","descriptor_name":"Plant Diseases","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D014026","descriptor_name":"Nicotiana","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014026","descriptor_name":"Nicotiana","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015854","descriptor_name":"Up-Regulation","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D018744","descriptor_name":"DNA, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030821","descriptor_name":"Plants, Genetically Modified","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044224","descriptor_name":"Pseudomonas syringae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D044224","descriptor_name":"Pseudomonas syringae","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1094/mpmi.2004.17.10.1139","doi":"https://doi.org/10.1094/mpmi.2004.17.10.1139","is_oa":false,"landing_page_url":"https://doi.org/10.1094/mpmi.2004.17.10.1139","pdf_url":null,"source":{"id":"https://openalex.org/S88768767","display_name":"Molecular Plant-Microbe Interactions","issn_l":"0894-0282","issn":["0894-0282","1943-7706"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320276","host_organization_name":"American Phytopathological Society","host_organization_lineage":["https://openalex.org/P4310320276"],"host_organization_lineage_names":["American Phytopathological Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Plant-Microbe Interactions\u00ae","raw_type":"journal-article"},{"id":"pmid:15497406","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15497406","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular plant-microbe interactions : MPMI","raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:2df244c7bd6c4fe9bec3e58e1bc1fb4c","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/2df244c7bd6c4fe9bec3e58e1bc1fb4c","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Molecular Plant-Microbe Interactions, Vol 17, Iss 10, Pp 1139-1145 (2004)","raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:doaj.org/article:2df244c7bd6c4fe9bec3e58e1bc1fb4c","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/2df244c7bd6c4fe9bec3e58e1bc1fb4c","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Molecular Plant-Microbe Interactions, Vol 17, Iss 10, Pp 1139-1145 (2004)","raw_type":"article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.5666999816894531}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W1964061865","https://openalex.org/W1972857786","https://openalex.org/W1973891844","https://openalex.org/W1977322059","https://openalex.org/W1979433722","https://openalex.org/W2003647281","https://openalex.org/W2012617920","https://openalex.org/W2041400380","https://openalex.org/W2049619068","https://openalex.org/W2050028499","https://openalex.org/W2054371593","https://openalex.org/W2068656489","https://openalex.org/W2073038673","https://openalex.org/W2085067998","https://openalex.org/W2090713954","https://openalex.org/W2107593640","https://openalex.org/W2108185748","https://openalex.org/W2115771825","https://openalex.org/W2120470126","https://openalex.org/W2120680457","https://openalex.org/W2123426755","https://openalex.org/W2124927074","https://openalex.org/W2136345652","https://openalex.org/W2137749186","https://openalex.org/W2154540205","https://openalex.org/W2155149426","https://openalex.org/W2155215703","https://openalex.org/W2159681920","https://openalex.org/W2169399986","https://openalex.org/W2170117443","https://openalex.org/W2213216408"],"related_works":["https://openalex.org/W2022709034","https://openalex.org/W2166863269","https://openalex.org/W2050455405","https://openalex.org/W2165576280","https://openalex.org/W2136345652","https://openalex.org/W1594203818","https://openalex.org/W2131090020","https://openalex.org/W7100403884","https://openalex.org/W1972857786","https://openalex.org/W1999229304"],"abstract_inverted_index":{"The":[0,132],"type":[1],"III":[2],"effector":[3],"protein":[4],"AvrPto":[5,51],"acts":[6],"as":[7,81],"a":[8,15,55,82,108,120,153],"virulence":[9,163],"factor":[10],"in":[11,26,34,52,123,144,152],"susceptible":[12],"plants":[13,28,36,78,125],"lacking":[14],"cognate":[16],"resistance":[17,25,40],"gene":[18,32],"but":[19],"triggers":[20],"hypersensitive":[21],"response":[22],"and":[23,75],"disease":[24],"tomato":[27],"carrying":[29,37],"the":[30,44,53,141,148,158,162],"Pto":[31],"or":[33,129],"tobacco":[35,77,124,145],"an":[38,135],"unknown":[39],"gene.":[41],"To":[42],"assist":[43],"characterization":[45],"of":[46,69,110,117,134,161,165],"cellular":[47],"responses":[48],"caused":[49],"by":[50,105,157],"plant,":[54],"pathogen-free":[56],"system":[57],"was":[58],"adopted":[59],"to":[60,97,102],"isolate":[61],"genes":[62,93,98,112],"up-regulated":[63],"12":[64],"h":[65],"after":[66],"induced":[67,104,151],"expression":[68],"AvrPto.":[70],"By":[71],"using":[72],"subtraction":[73],"cloning":[74],"transgenic":[76],"expressing":[79],"avrPto":[80,136,142],"transgene,":[83],"we":[84],"isolated":[85],"125":[86],"nonredundant":[87],"cDNA":[88],"clones":[89],"that":[90,99,138,147],"represent":[91],"avrPto-response":[92],"(ARG).":[94],"In":[95],"addition":[96],"are":[100],"known":[101],"be":[103],"Pto-avrPto":[106],"recognition,":[107],"number":[109],"new":[111],"were":[113,150],"also":[114],"isolated.":[115],"Most":[116],"ARG":[118,149],"showed":[119],"specific":[121,155],"induction":[122],"challenged":[126],"with":[127],"incompatible":[128],"nonhost":[130],"pathogens.":[131],"use":[133],"mutant":[137],"selectively":[139],"eliminated":[140],"recognition":[143],"demonstrated":[146],"highly":[154],"manner":[156],"avirulence,":[159],"instead":[160],"activity":[164],"avrPto.":[166]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2016-06-24T00:00:00"}